Nematolebias whitei (Rio pearlfish): 119428361
Help
Entry
119428361 CDS
T08042
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119428361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119428361
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119428361
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
Motif
Other DBs
NCBI-GeneID:
119428361
NCBI-ProteinID:
XP_037551965
LinkDB
All DBs
Position
22:<29404586..29445556
Genome browser
AA seq
377 aa
AA seq
DB search
MPNLMDLTINLRISEPSTFNPFCLSSNGTLAPPHVIPMPLLPMTPDLPVTSDLHAQGQMV
EQGSFGPPVGLSDRFQDLNSLHSIAASAQQVPESMEASNMGVIPNQTEPQAHQPCKYDLL
SSVPLTDLDLKFLYRGRTMGSLTVSNPQGCRLYYGHLEPTPEQVDLFGPVTLQQVLFPGT
SEIQNQKQRFYTEALLDVMDRGLILEIQEQDIYAIRLCQCKVFWSGPGMPEQGPSNPIER
ERKLKVFSLNDFLQGLILFQRGEAPNPPPFEVFFCFGEDWPDKKPKEKKLIIVQVVPVVA
RILTEMFSGELNWSTESIRLQISNPDVKDQTVEQFKELQRLLQTQLGTQGPWGSGVPPGA
LNVPMNNASIGFSLGNS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatttgatggacctcactatcaacctccggatcagtgagccatcaaccttcaac
cccttctgtctatcctccaatggaacacttgcacctccacatgtgatcccgatgcctctc
ctcccaatgactcctgacctcccagtaacctctgacttgcatgctcaaggtcaaatggta
gaacagggcagctttggtccacccgtaggactctcagacagattccaggacttaaactcg
ctgcactccatagctgcctctgctcagcaggtgcccgaatcaatggaggccagcaacatg
ggggtcatcccaaaccagacggaacctcaggcccaccaaccctgcaaatatgatctgctg
agcagtgtaccattaacagatctggacctgaagttcctgtacagggggcggacgatgggc
tcccttacagtcagtaatccccagggttgccgtctttactacggacacctggaaccaacc
ccggagcaagtggacttgtttgggcctgtgactttgcagcaggtcctgtttccaggcaca
tctgaaatccagaaccagaagcagcggttctacaccgaggcccttctggatgtaatggac
cgaggtcttatcctggagatccaagaacaggacatttatgcaattcgcctctgtcagtgc
aaggtgttctggtcaggaccaggcatgccagaacagggaccatcaaatccaatagagaga
gagaggaagcttaaagtgttcagcctcaacgacttcctgcaaggcctcatcctgtttcag
aggggagaagctccaaaccctccaccttttgaggtgttcttctgttttggagaagactgg
cctgacaagaaaccaaaagagaagaaactcatcattgtccaggtggttccagtggtggct
cggatcttgacagagatgttttctggagaactgaactggtccacagaaagcatccggcta
caaatctcaaatcctgatgtgaaggaccagacagtggagcagttcaaagagctacaaagg
ctcctgcagacccagcttggaacccaggggccctggggttccggtgttcccccaggggcc
ctgaatgttcccatgaacaatgcatccattggtttctcactggggaatagctga
DBGET
integrated database retrieval system