Nematolebias whitei (Rio pearlfish): 119428422
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Entry
119428422 CDS
T08042
Name
(RefSeq) filamin-C
KO
K27393
filamin-C
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119428422
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nwh04812
]
119428422
Cytoskeleton proteins [BR:
nwh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119428422
Intermediate filaments
Intermediate filament-binding proteins
119428422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
CH
Ig_GEX2_N
Big_3_5
CH_2
Motif
Other DBs
NCBI-GeneID:
119428422
NCBI-ProteinID:
XP_037552031
LinkDB
All DBs
Position
22:complement(982987..1075596)
Genome browser
AA seq
2428 aa
AA seq
DB search
MMMGSFLEPPQQQVPPEFGPGSEEEDLPCTEKDLAEDAPWKKIQQNTFTRWCNEHLKVLH
KKIHDLQRDLSDGLKLVGLLEVLSQKNMYRKYHARPNFRQMKLENVSVALEFLEREHIRL
VSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDAKKLTPKQRLLGWIQNKVP
QLPITNFHRDWRDGKALGALVDNCAPGLCPDWETWDPSQPVENAREAMQQADDWLGVPQV
IAPEEIVDPNVDEHSVMTYLSQFPKAKLKPGAPLRARTLHPNRAKAFGPGIEPRGNMVLK
PAEFLVETVEAGLGEVLAYVEDPEGHTEEARVIPSNDKNRTYAVVYLPKVEGLHKVKVLF
AGQDIDRSPFMVHVSKAMGDPSRVQARGPGLQSSGNVANKPTYFDIYTAGAGSGDVGVII
VDSNDRRDTVEIVLEDRGDSIFRCTYVPVLEGPHTVYVTFAGQQIPRSPFTVHISEVPQS
TPVPGSLVQVVPQSIRTSPSDKARRAPPPTPPKPRRPTCNPNACRALGRGLQQKGLRVKE
VADFKVYTKGGGSGELRVSVKGPKGVEEPVKVLEMENGVFECNYYPVTTGKYIISITWGG
HGIPRSPFEVHVIEEAGPQKVRAWGPGLETGMVGKSADFVVEAIGTEVGTLGFSIEGPSQ
AKIECDDKGDGSCDVRYWPTEPGDYAIHVICDDEDIKDSPFMAHVLPVANDRFPEKVKCY
GPGLEPLGCIVNKPADFTIDTSGAGRGELNIYAQDADGFPIDIQITDNGDCSYFCVYIPT
KPIKHTLIITWGEVNVPDSPFRVIIGEGSHPENVKVYGPGVEKMGLKANEPTYFTVDCSE
AGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYMPPGPGQYTIMVLFADQEIP
ISPFRIKVDPSHDAAKVRAEGPGLNRAGVEVGKPTHFNIYTKGAGKAKPEVHFIGAAKGE
AVQDFEIIDNHDYSYTVRYTAVQQGNMSITVCHGGDPIPKSPFSITVAPSLDLSKVTVQG
LNNKVDVGKDQEFFVSVGGAGGQGELDVKILSPSLRPIACNLELDTASEVHTVKYVPHEE
GPIRVDISYDRNPVPGSPFTVEGIMPPDPSKVQAYGPGLQGGLVGKMAPFAIDTKGAGTG
GLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYAINILFADQHIPGSPFKAVVQSMF
DSSKVMASGPGLERAQVNETGSFVVDCSKAGEAELTIEIISEMGTKAEVHVQDNSDGTYS
ITYIPQSHGMYTITIKYGGHTVPKFPTRLQVDPAVDTSGVKVYGPGVEPRGVLREVTTHF
IVDARALYKNGGSHLKVDISNPSGANTNTFITDKADGTYRVEYTPHEDGLHLIQVFIDEV
SVPKSPFRVSVTEGCDPSRVRAFGPGLEEGLVNKTNRFTVETRSAGTGGLGLAIEGPSEA
KMSCKDNKDGSCSVEYIPFTPGEYDVNVTFGGLPIPGSPFRVPVQELVDPSKVRCSGPGL
GSGVRAHVPQTFTVDSSKAGVAPLEVQLYGPTGVAEPVSITNNGDGTHTVSYTPANDGPY
MVCVRYADQEVPRSPFKIKTLPAHDASKVRASGPGLNTSGVPASLPVEFTIDARDAGEGL
LSVQILDPEGKPKKANIRDNRDGTYTVSYIPDVTGRYTITIKYGGDEIPYSPYRIHAVPT
GDASKCLVTVSIGGHGLGSGLGPTIQIGKETIITVDAKAAGKGKVTCKVSTPDGAELDVD
VVENSDGTFDIYYTAPEPGQYIITIRFGGEHIPNSPFHVVATNDVLSQMNGMEPALRPFS
LVIPFTVQTGEVSGSPFTVKIFGEGRMKESITRKRQAPSIATVGSTCDLNLKIPGNWFQM
VSAQERLTRTFTRSSHTYTRTERTEISKTRAGETKREVRVEESTQVGGTPFRDVFGDFLG
RENLSGFSGLPAPPPPPQDGEAGNQEMTAQVTSPGGKTEDAEILKGEDSTYSVRFIPKEM
GPHIVSVKYRGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLDRGVAAVPAEFSIWTREAG
AGGLSIAVEGPSKAEITFEDRKDGSCGVTYVVQEPGDYEVSIKFNEEHIPDSPFIVPIAS
QSDDARRLTITSLQEMVLKVGQEASFAVQLNGARGLIDAKIHTPSGATKECHVTELDSAD
QFAVRFVPKENGVHSIDVRFNSSHVPGSPFKIRVGEPGQVGDPGLVSAFGPGLEGGTTGI
ASEFIVNTCNAGTGALSVTIDGPSKVKMDCQECSEGYKVSYTPMAPGSYLISIKYGGPQH
IVGSPFKARVSGPHLSGGHNLHETSSVLVESIANKAAVGGAFAVGGAFCSLPKFTSDISK
VTSCGAGLSKAFIGQKNAFTVDCSQAGTNMLMVGVHGPRAPCEEVYVKHMGNRMYNVTYT
VKEQGSYILIVKWGDENIPGSPFLVMVP
NT seq
7287 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgggcagcttcctggagcccccccagcagcaggtccctcctgagttcgggccc
ggttcggaggaggaggacctgccgtgcacagagaaggacctggcggaggacgcgccctgg
aagaagatccagcagaacaccttcaccaggtggtgcaacgagcacctcaaggtcctgcac
aagaagatccacgacctgcagcgggacctgagcgacggcctgaagctcgtgggcctgctg
gaggttctgagccagaagaacatgtaccggaagtaccacgccaggcccaacttccggcag
atgaagctggagaacgtgtccgtggcgctggagttcctggagagggagcacatccggctg
gtgtccatcgactcaaaggccatcgtggacgggaacctgaagctgatcctgggtctgatc
tggaccctgatcttacactactccatctccatgcccatgtgggaggacgaggacgatgag
gacgccaagaaactgacccccaaacagcgtctgctaggctggattcagaacaaggtcccc
cagctgcccatcaccaacttccaccgggactggagggacgggaaggccctaggagccctg
gtggacaactgtgcccccggtctgtgtccggactgggaaacctgggatcccagtcagcca
gtggagaacgctcgtgaggccatgcagcaggcagatgattggctgggagtcccgcaggtg
atcgctccggaggagattgtggacccgaacgtggacgagcactctgtcatgacgtacctg
tctcagttccccaaagccaagctgaaacctggagcccccctccgggccagaaccctgcac
cccaatagggctaaagccttcggaccaggtatcgagcccagaggtaacatggttctgaaa
ccagcagagttcctggtggagacagtggaggctggattgggggaggtcctggcttatgtg
gaggaccctgagggacacacagaggaggcccgagtgatccccagcaatgacaagaaccgg
acctacgctgtggtctacctgcccaaagtggagggtctacataaggtgaaggttctgttt
gccgggcaggacatcgacagaagccccttcatggtacatgtgtccaaggccatgggagac
ccgagcagagttcaggcccgcggaccaggacttcagtcatcggggaacgtggccaacaaa
cccacgtactttgacatttatactgcaggggcgggttctggagatgtgggtgtcataatc
gtggactcaaacgaccggagggacacggtggagatcgtcctggaggacagaggtgacagt
atcttccggtgcacctatgttccggtcctggagggtccccacaccgtctacgtgaccttt
gcagggcagcagattcccagaagccctttcaccgtccacatctctgaagttccacagagc
acccctgttcccggctctttggtgcaggttgtacctcagtccatacgcacctccccctca
gacaaggcaaggagagcccccccaccaactcctccaaaaccaaggcgaccaacctgtaac
ccaaacgcctgccgggccctgggccgaggtctgcagcagaagggcctgagggtgaaggag
gtggcagacttcaaagtttacaccaaaggaggcggcagcggggagctgagagtcagcgtg
aagggaccgaagggcgtggaggagccagtgaaggtgctggagatggaaaatggagtgttt
gagtgtaattattaccccgtcacaacaggaaagtacatcatatccattacctggggagga
catggcatcccacgcagcccatttgaagtccatgtaatcgaggaggccgggcctcagaag
gtcagggcctggggtccaggtctagagaccggtatggtggggaagagcgccgactttgtg
gtggaagccattggcacagaagtgggaactcttggcttctccattgagggcccctcccag
gctaagatcgagtgtgatgacaaaggcgacgggtcatgtgatgtccggtactggccgact
gaaccgggcgactatgccatccacgtcatatgtgatgatgaggacatcaaggacagcccc
ttcatggctcacgtcctccctgttgccaacgacaggtttcctgagaaggtgaaatgttac
ggacctggtctggagcctctgggctgcatcgtcaacaaacccgctgacttcaccattgat
accagtggagctggcagaggagagctgaacatttacgctcaggatgcagatggtttcccc
atcgacatccagatcacagataatggagactgcagctacttctgtgtttacatccctacg
aaacccatcaaacacaccctcatcatcacctggggtgaagtcaacgtccccgacagcccc
ttcagggtgatcatcggagagggtagccatccagagaacgtgaaggtttacggtccaggt
gttgagaagatgggactgaaggccaacgagcccacgtacttcactgtggactgcagcgag
gccggacaaggtgatgtcagcatcgggatcaagtgtgctccaggtgtggtcggaccagcg
gaggctgacatcgactttgacatcatcaagaatgacaacgacacgttcacagtgaagtac
atgcctccaggtccgggtcagtacaccatcatggtgctgtttgccgaccaggaaattccc
atcagccctttcagaataaaggtggatccctcccatgatgcagctaaagtcagagcggag
ggacctggactcaaccgggcaggtgtggaggtgggaaaacccactcacttcaacatttac
acaaagggagctggaaaagccaaacctgaggtccatttcatcggagcagcaaaaggcgag
gctgttcaagactttgagatcatcgacaaccacgactactcgtacacggtccgctacacc
gccgtgcagcaggggaacatgtccatcactgtgtgccatggaggagaccccatccctaaa
agtccgttcagcatcactgtggccccctcactggacctcagtaaggtcaccgttcaggga
ctgaacaacaaggtggatgtggggaaggaccaggagttctttgtcagtgttggaggggct
ggaggtcagggagaactggatgtaaagatcctgtctccatcactccgtccaatcgcctgc
aacctggagctggacacagccagtgaggttcacacggtgaagtacgttccccacgaggaa
ggaccgatcagagtggacatcagctatgacagaaacccagtcccaggaagtccatttacc
gtggagggcatcatgccccctgacccctcaaaggtccaagcctatggtcctggtcttcag
ggtggtttagtggggaaaatggccccctttgccattgacactaaaggggctggaactggt
ggactgggcctgacagtagaaggtccttgtgaggccaaaatcgaatgccaggacaatggc
gatggatcttgttctgtgtcctatctgcccaccgagcccggtgagtacgccattaacatc
ctgtttgcagatcagcatatccccgggtcccccttcaaggctgtggtccagtccatgttc
gactccagcaaggtgatggccagtggacccggcttggagcgagcacaggtcaacgagact
gggtctttcgtggtggactgctccaaggctggcgaggctgagctcaccatcgagatcatc
tcagagatgggaaccaaagctgaagttcacgttcaggacaacagcgacgggacctactct
atcacctacatcccccagagccatggcatgtacaccatcaccatcaaatacgggggtcac
actgtgcccaagttccccacccgcctgcaggtggacccagctgtggacaccagtggggtg
aaggtgtatggaccaggagtggaaccaagaggagtcctgagggaagtaacgacccacttc
atcgttgatgctcgagctctctacaagaatggagggagccaccttaaagtggacatatcc
aacccgtcaggcgccaacaccaacaccttcatcacagataaggccgacgggacgtacagg
gtggagtacaccccccatgaggatggtttgcacctgattcaagtgttcatcgatgaggtc
tcggtcccaaagagccccttcagggtgtcagtcactgagggctgtgaccccagtcgagtc
cgggctttcggtccaggtctggaggaaggactggtgaataaaacaaaccgcttcactgtt
gagaccaggagtgcagggactgggggactgggtctggccattgagggtccatcagaagca
aaaatgtcctgtaaagataacaaagatggcagctgcagtgtggagtacatcccgttcact
cctggagagtatgatgtcaacgtcaccttcggagggcttcctatcccaggaagtccattt
cgtgtcccagtgcaagagctggtcgatcccagtaaggtccgatgttcaggtcctggtctt
gggagtggagtccgagctcacgttcctcagaccttcactgtagacagtagcaaggctggg
gtggctcccctggaggtccagctctacgggccaacaggtgtggccgagcccgtcagtatc
accaacaacggggacggcactcacacggtgagctacactcctgccaacgatggcccgtac
atggtgtgtgtgagatacgctgaccaggaggtccctcgcagtccttttaagatcaaaacc
ttaccggctcacgacgccagtaaggttcgagccagcggtccgggcctgaacacgtccgga
gtcccagccagtctgccggtggagttcaccattgatgccagggatgcaggggagggactt
ctcagcgttcaaatcctggacccggagggaaagcccaagaaggcgaacatccgggacaac
agggacgggacgtacacggtgtcctacatcccagacgtcacgggtcggtacaccatcacc
attaagtacggaggagatgagatcccatactcaccgtaccggatccacgccgtgcccaca
ggagacgccagcaagtgtctggttacagtgtccattggaggacatggactcggttctgga
cttggcccaaccatccagatcggaaaggagacgatcatcacggtggatgcaaaggctgct
gggaaaggaaaagtaacctgcaaggtgtcgacaccggacggcgcagagctggacgtggac
gtggtggagaactcagacgggacgtttgatatttattacacggctccagaacccgggcag
tacatcatcaccatccgctttgggggcgagcacatccccaacagccccttccacgtggtg
gccacaaatgatgtgctcagtcagatgaatgggatggagccggctctgcgtcccttcagt
ctggtcattcccttcaccgtgcagacaggagaggtttcaggaagtccgttcactgtgaag
atctttggtgagggtcgaatgaaggagagcatcaccaggaaacgtcaggccccgtccatc
gccacagtgggcagcacctgcgacctcaacctgaagatcccaggaaactggtttcagatg
gtttcggctcaggaacgtctgactcggaccttcactcgcagcagccacacgtacactcgg
actgagcgcacagagatcagcaaaactcgagctggagagaccaagagagaggtgcgggtg
gaggagagcacgcaggttggaggaactcccttcagggacgtgtttggagattttctggga
cgagagaatctgagcgggttcagtggactgccggcaccgccgccgccaccgcaggacggt
gaagcaggtaaccaggagatgacagctcaggtgacaagtcccggagggaagacggaggac
gcagagatccttaaaggagaggacagcacgtacagcgttcgcttcatccccaaggagatg
ggacctcacatcgtcagtgttaaataccggggccagcacgtccctgggagccccttccag
ttcaccgtggggcccctgggggagggaggggcccataaggttcgagcaggtggaaccgga
ctggaccgtggagtggcagcggtccctgctgagttcagcatctggaccagagaagctgga
gctggtggtttgtccatcgctgttgaaggacccagcaaggccgagatcacctttgaagac
cgaaaggatggttcctgtggagtcacctatgtggtgcaggagcctggtgattatgaggtt
tccattaagttcaacgaagaacacatccccgactctccgttcattgtccccatcgccagt
cagtctgatgacgctcgccgcctcaccatcaccagcctgcaggaaatggttctgaaggtg
ggtcaggaagcctccttcgctgtgcagctgaacggggccagaggcctgattgatgcaaag
atccacaccccatcaggagccaccaaggagtgtcacgtcactgaactggacagtgcagat
cagtttgccgtcagatttgtcccaaaggagaatggtgttcattccatagacgttcgcttc
aacagcagccatgttcccggcagccccttcaagatccgagtaggagaaccaggccaggtt
ggagatcctgggcttgtgtctgcctttggaccagggttggaaggaggaaccacaggtata
gcatctgagtttatcgtcaacacgtgcaacgctggaaccggagcgctgtccgtcaccatc
gatggaccgtccaaagtcaagatggactgtcaggagtgttctgaaggctacaaggtctcc
tacacacccatggctcctgggagctacctgatctccatcaaatatggaggaccccagcac
attgttggcagccccttcaaagccagagtctcaggacctcatctgtctggaggtcacaac
ctgcatgagacgtcgtctgttctcgtagaatctatcgccaataaagctgcagtgggtgga
gcttttgcagtgggcggggctttttgctcactacctaaattcacttcggacatcagtaag
gtgacctcctgcggcgctggtctctccaaagccttcatcggtcagaagaacgcgttcaca
gtcgactgcagccaagcaggaaccaacatgttgatggttggggtccacgggcccagagca
ccctgtgaggaggtctacgtgaagcacatggggaacaggatgtacaacgtgacgtacacg
gtgaaggaacagggcagctacatcctcatcgtgaagtggggcgatgagaacatccctggg
agtccattccttgtcatggttccttaa
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integrated database retrieval system