Nematolebias whitei (Rio pearlfish): 119428810
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Entry
119428810 CDS
T08042
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119428810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119428810
Transcription factors [BR:
nwh03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
119428810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
zf_ZIC
Motif
Other DBs
NCBI-GeneID:
119428810
NCBI-ProteinID:
XP_037552425
LinkDB
All DBs
Position
23:1380140..1463138
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AA seq
1353 aa
AA seq
DB search
MEASPPAAAEKKHKMDGSSFTDMPKKLSATDMRAPQHLFPAFHTPIPLDVRHHEGRYHYE
PHTLHAMHSPTGLPGSPILSDISLIRLSPAAVAPGESPFSPPHPYVSPHLEHYLRSVHGS
PALSTISAARGLSPADLAHEHLKERGLLGLPPPPSAEYYHLMASHRSPYSELLLQGAGGP
GGAHLSDYFGPIEVSRFSSPRLMPRLSRKRALSISPLSDASIDLQTMIRTSPNSLVAYIN
NSRSSSAASSSYGHLSVGGLSPSFPFPHPINSVAYQQLLSQQRGLSAFGHNPPLIQTTPT
FSGHQSGLSLSSMNASCHNIDLMSKNHGGDPAVSSTVDPMNKRSKVKVEAEGMRLASPVS
PNHLSGPLDLKEDVDRDECKPEPEVVYETNCHWESCSKEFDTQDQLVHHINNDHIHGDRK
EFVCRWDDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHT
GEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTV
HGPEAHITKKHRSDVPPPPPAPRENGQKERLQREEQTSRTSPPRSREDYVHIKSIKSEDS
MMHQPSPGGHSSCSSEPSPFGTNHDSGVDTAAHSGGSPGDLSTLDDLTFVESTGCEESSG
GVAAVGLYLRKQLGTGHFLDRLKKDKLRAVRDSCRWANNPTPPVHGATLPPVRTRGCLLE
TSSVGGNTASFPSSGSDPLNSDEMTLLGNPSERCHSTCSTFSSVYTLSRRSSGISPGFSS
RRSSQTSRLSANQPRNMSSADFYDPISADISRRSSQASQGEVNSNGPEGRRPGLPNPLNL
TPAQHYCLQAKYAAATGGAPPTPLPYIHQAHLKSNSALFENSQESSGNKKLLSRQYSALW
SLMPNKVSANIPRRASDPGRPLDPLSQLPFQKYRSMGSLSRGVTMQPHPPPATDRCFSQP
RCLRLGSGLHRHPSCLQPPSISENITVETRRNICEDATNQADFQRGLNVHQQQNVQRRMN
VLNLNTSKSLGQAWDSCPRGQWDIVSSGLLDDTQQCTKLEVRGNLTTLRQNQNFRPFSPT
SNQEVVENMSNRVQQRCLQFSSESVPNLFQQSFNLTDDAAKPEYRFCEGTGSYDRNGNLL
CGTKLASCKQEPADMDFTVFEPVQVKTESCDASVLILDQQNCNLARNQDCLKPITEPRSV
RLLSLKLTQQTDEGSQLPCRHEDNVLYYTGQIQVFEPSPNLGFHVSNTVTPLEPDATAPE
WTETQLDKTSGLEQTQIDFDSLLNIGDQSSFMSGTLSPGLFQSFSQSSSRLTTPRSSASL
PSVSARPGNMAIGDMSSLLTTLAEEDKYLNLIS
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctctccacccgcagcagctgagaaaaaacacaagatggatgggagcagtttc
accgacatgccgaagaaactctcagccactgacatgagagccccccaacacctcttccct
gccttccacacgccgatccccctggatgtccggcaccacgagggacggtaccactacgag
ccccacaccctgcacgccatgcacagccccacaggtctacctggcagccccatcctctct
gacatctccctgatccgcctctcgccagctgccgtggcgcccggagagtctccgttcagc
cctcctcacccgtacgtctccccccacctggagcactacctgcgctcggtgcacggcagc
cccgccctgtccacgatctctgcagcacgaggactcagccctgcagacttggcccatgag
cacctgaaggagcgtgggttgttgggacttccccctcccccctcagcggagtattaccac
ctgatggccagccaccggagcccctacagcgagctgctcctgcagggggccgggggccct
gggggggcccacctgtccgactacttcggtcccatcgaagtgtcccggttctccagtccc
agactgatgccccggctcagcaggaagcgggccctgtccatctctccgctttccgacgcc
agcatcgatctccagactatgatccggacctcgcccaactccctggtggcgtacatcaac
aactcccggtccagctcggctgccagcagctcttacggacacctgtcggttggaggtctc
agcccttcgtttccattccctcatcccatcaactctgtggcgtaccagcagctcctctcc
cagcagcgaggtctcagcgcctttggtcacaacccacccctcatccagactacgcccacg
ttctctggacaccagtcgggcttgagcctttcctcgatgaatgcctcgtgccacaacata
gacctgatgtccaagaaccatggaggcgacccggcagtcagcagcacagtggaccccatg
aacaaaaggtcaaaggtgaaggtggaggcagagggaatgaggctggcgtctcctgtctca
ccgaaccatctcagcggcccgctggatctgaaggaggacgtggaccgggacgaatgtaaa
cccgaacccgaagttgtgtacgagaccaactgtcactgggagagctgcagcaaggagttc
gatacccaggaccagctggtccatcacatcaataacgaccacatccacggagacaggaag
gagttcgtgtgccgctgggacgactgctcgcgggagcagaagcccttcaaggctcagtac
atgctggtggtccacatgcgccggcacaccggggagaagccacacaagtgcacgtttgag
ggctgctccaaggcctactctcgtctggagaacctgaagactcacctccgctctcacact
ggagagaaaccgtacgtctgcgagcacgagggctgcaacaaggctttctccaacgcctcg
gaccgggcaaagcaccagaatcggacccactctaatgagaagccgtacgtctgtaagatc
cccggctgcaccaagcggtacacagaccccagctctctcaggaaacacgtgaagacagtt
cacggcccggaagcccacatcaccaagaagcatcgcagcgacgtaccgcccccaccaccc
gcgccccgggagaacggccagaaggagaggctccagagggaagagcagacgtcgaggacc
agcccccccagaagcagagaggactacgtgcacatcaagtccatcaagagtgaggactct
atgatgcatcagcccagtcctggcggtcactcatcatgcagcagcgaaccatcaccattt
ggcaccaaccatgacagtggagtagacacggcggcgcacagcgggggcagcccgggggac
ctcagcaccctggatgacctgacgttcgtggagtccacgggctgcgaggagtcctccggg
ggggtcgcagcggtgggcctctatctcaggaagcagctcggtaccggccatttcctggat
cgtctgaagaaggacaagctgagagcggtgagggactcgtgtcggtgggccaacaaccca
acacccccagtccacggcgccacgctgccacccgtacggacaagagggtgcctcctggaa
acttcaagtgtgggaggaaatacagcttccttccctagttctggctctgacccactgaac
tccgatgaaatgacactgctgggaaacccttctgaacgctgtcacagtacttgcagcacc
ttcagctcagtctacactctcagccgccgctcctcaggcatctctcctggtttctccagt
cgacgctcaagccagacgtctagattaagtgccaaccagcccagaaacatgagctctgct
gacttttatgaccccatttctgctgatatctctcggcgttccagtcaagccagtcagggt
gaagtcaacagcaatggacccgaaggaagaagaccaggccttcccaatcccctgaacctg
accccagcccagcactactgcctacaggcgaaatatgccgctgccactggtggagcacca
cctacacctcttccatacatacatcaagcacatctcaagtccaactcagcactctttgaa
aactcccaggaatcctcaggcaacaaaaagcttctgtccaggcagtacagcgcattatgg
agcctgatgcccaacaaagtttcagctaacatcccccgccgagcgagtgatcccggaaga
ccgttagatcctctcagccagttgccctttcagaagtacaggagcatgggttcactgagc
agaggggtcaccatgcagccccatcctcctccggcaacagatcgatgcttttcacagcca
agatgcttgcgactgggcagtggtctgcatcgacacccttcctgcctgcaaccacccagc
atttcagagaatatcaccgtggagactagaaggaacatatgtgaagatgcaaccaatcag
gcagattttcaaagaggtctgaatgtccatcagcagcagaatgtccaaagaaggatgaat
gtgttaaatctgaacacttccaagagtctaggacaagcatgggacagttgtcccagagga
cagtgggacatagtttcctctgggctcttggatgacactcaacagtgcaccaaactagag
gtacgagggaacttaaccacccttcggcaaaatcagaacttcagacctttcagtccaacc
tccaaccaagaagtggtggaaaacatgtccaacagagtgcagcagagatgtctccagttc
agttctgagtcagtaccaaacctcttccagcaatcctttaacctcactgatgatgctgct
aagccagagtacaggttctgtgaaggaaccggttcctacgatagaaatgggaacctactc
tgtggtaccaagttggcgagctgtaaacaggaaccagctgacatggacttcactgtgttt
gagccagttcaggtaaaaactgagagctgtgatgcttcagttttgattttagatcagcag
aactgtaatttggctagaaatcaggactgtctcaagccaataacagaacctagatctgtt
cggctactgagcctgaagttaacgcagcaaacagatgaaggttcacaacttccctgcaga
catgaagacaacgttctatactacacaggtcagattcaggtatttgagcccagcccaaac
ctgggttttcatgtatccaacacagtgactcctcttgaacctgatgcaacagctcctgag
tggactgaaacccagctggacaagacctcaggactagagcagactcagatagattttgat
agcctgctcaacatcggggatcaatccagctttatgtcaggaaccttaagtcctggactg
ttccagagtttctcccagagttcatctcgcctgactactcccaggagctctgcgtcgctg
ccctcagtgtcggccaggccggggaacatggccatcggggacatgagctcactgctgacc
actctggcagaagaggacaagtacctcaacttgatttcttaa
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