Nocardia wallacei: NWFMUON74_19780
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Entry
NWFMUON74_19780 CDS
T07034
Symbol
ligA_1
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
nwl
Nocardia wallacei
Pathway
nwl03030
DNA replication
nwl03410
Base excision repair
nwl03420
Nucleotide excision repair
nwl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NWFMUON74_19780 (ligA_1)
03410 Base excision repair
NWFMUON74_19780 (ligA_1)
03420 Nucleotide excision repair
NWFMUON74_19780 (ligA_1)
03430 Mismatch repair
NWFMUON74_19780 (ligA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwl03032
]
NWFMUON74_19780 (ligA_1)
03400 DNA repair and recombination proteins [BR:
nwl03400
]
NWFMUON74_19780 (ligA_1)
Enzymes [BR:
nwl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NWFMUON74_19780 (ligA_1)
DNA replication proteins [BR:
nwl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NWFMUON74_19780 (ligA_1)
DNA repair and recombination proteins [BR:
nwl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NWFMUON74_19780 (ligA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NWFMUON74_19780 (ligA_1)
MMR (mismatch excision repair)
DNA ligase
NWFMUON74_19780 (ligA_1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NWFMUON74_19780 (ligA_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
Motif
Other DBs
NCBI-ProteinID:
BCK54206
UniProt:
A0A7G1KI61
LinkDB
All DBs
Position
2146204..2148306
Genome browser
AA seq
700 aa
AA seq
DB search
MDSANLRAVSESGIESSEATADERTQWQRLAEEVREHQFRYYVRDAPIISDGEFDALFQR
LLALEEAHPDLRTPDSPTQLVGGGFATEFTAVDHLERMLSLDNVFDEEEMRVWVSRVEAE
TGPDIHYVCEVKIDGVALNLVYEDGRLTRAATRGDGRTGEDVTLNARTIDDIPVRLAAND
EFPIPKLLEVRGEVYFRLSDFETLNAAIVAEGKPPYANPRNTAAGSLRQKDPAVTARRRL
RMICHGFGRMQGFTPASQYEAYRALAAWGLPVSSHTVRVRGADAVVERIRYWGEHRHDIE
HEIDGQVVKVDEMVLQRRLGSTSRAPRWAIAYKYPPEEVTTKLRDIQVNVGRTGRVTPFA
VMEPVTVAGSTVSMATLHNAAEVQRKGVLIGDTVTIRKAGDVIPEVLGPVVDVRDGSERE
FVMPTHCPECGTELAPEKESDADIRCPNQRYCPAQLRERVFHMAGRGAFDIEALGYEAAV
DLLKSGVIADEGDLFDLDEEKLLTTTLFVNKNGSLSANGKRLLQNLDSAKDRPLWRVLVA
LSIRHVGPTAARALAAELGSMDRIENATLEELSAVDGVGPTIAVAVKEWFAVDWHRAIVA
KWDAAGVRMADERDESIERTLEGLSIVVTGSLQTLSRDEAKEAILVRGGKAAGSVSKKTA
YVVIGDAPGSKAAKAEELGVPILDEDGFRRLLEGGPSALE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
gtggactccgctaatctgcgtgctgtgagcgaatccgggatcgagagcagcgaagcgaca
gcggacgagcgtacgcagtggcagcggctggcggaggaggtgcgcgagcaccagttccgc
tactacgtgcgcgacgcgccgatcatctccgacggcgagttcgacgcgctgttccagcgg
ctgctggcgctggaagaggcccacccggacctgcgcacgccggactcgccgacgcagctg
gtcggcggcggcttcgccaccgagttcaccgcggtcgaccacctcgagcgaatgttgtcg
ctggacaacgtcttcgacgaggaggagatgcgggtgtgggtgagccgggtggaggcggag
accggccccgacatccactacgtgtgcgaggtgaagatcgacggcgtcgcgctcaatctc
gtctacgaggacgggcggctgacccgggcggccacccgcggcgacggccgcaccggtgag
gacgtcacgctcaacgcccgcaccatcgacgacatcccggtccggctcgccgcgaatgac
gaattcccgataccgaaactgctcgaggtgcgtggcgaggtctatttccggctgtcggat
ttcgagaccctcaacgccgccatcgtcgccgagggcaagccgccctacgccaatccgcgc
aacaccgccgccggttcgctgcgccagaaggacccggcggtgacggcgcgccggcggctg
cggatgatctgccacggcttcggccgcatgcagggtttcaccccggcctcccagtacgag
gcctatcgcgcgctggcggcgtggggcctgccggtgtcgtcgcacacggtccgggtgcgg
ggcgccgacgcggtggtcgagcgcatcaggtactggggcgagcaccgccacgacatcgag
cacgagatcgacggccaggtggtcaaggtcgacgagatggtgctgcagcgccgcctcggc
tccacctcccgcgccccgcgctgggcgatcgcctacaagtacccgcccgaggaggtcacc
accaaactgcgcgatatccaggtcaatgtcggccgcaccggtcgggtcacgccgttcgcg
gtgatggagcccgtcaccgtggccgggtccacggtgtcgatggccacgctgcacaacgcc
gccgaggtgcagcgcaagggcgtgctgatcggcgacacggtcaccatccgcaaggcgggc
gacgtaatccccgaggtgctgggcccggtggtcgacgtgcgcgacggctccgaacgcgaa
ttcgtgatgcccacgcactgcccggagtgcggcaccgaactggcgccggagaaggagagc
gacgccgacatccgctgccccaaccagcggtactgcccggcacagttgcgcgagcgggta
tttcacatggccgggcgcggtgcgttcgacatcgaggcgctcggttacgaggccgccgtc
gacctgctgaagtcgggcgtgatcgccgacgagggcgacctgttcgacctcgacgaggaa
aagctgctcaccacaacgcttttcgtcaacaagaacggcagcctgtcggccaacggcaag
cggttgctgcagaacctggacagcgccaaggaccgtccgctgtggcgggtgctggtcgcg
ctgtcgatccgccacgtcggcccgaccgcggcccgcgcgctcgccgccgaactcggcagc
atggaccgcatcgagaacgcgacactcgaggagttgtccgcggtcgacggcgtaggcccc
accatcgcggtcgcggtgaaggaatggttcgccgtcgactggcaccgcgccatcgtggcg
aagtgggacgccgccggcgtgcggatggccgacgaacgcgacgaatccatcgagcgcact
ctcgagggcctgtcgatcgtggtcaccggttcgctgcagaccctttcccgcgacgaggcc
aaggaggcgatcctggtccgcggcggcaaggcggcgggctcggtctcgaagaagaccgcg
tacgtggtgatcggcgacgcgccgggctccaaggcggccaaggcggaggaactgggcgtc
ccgatcctggacgaggacggcttccggcgattactcgagggcggtccgtccgcgctggag
tga
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