Nitrosococcus wardiae: E3U44_02050
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Entry
E3U44_02050 CDS
T05933
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
nwr
Nitrosococcus wardiae
Pathway
nwr00300
Lysine biosynthesis
nwr00550
Peptidoglycan biosynthesis
nwr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nwr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E3U44_02050
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E3U44_02050
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nwr01011
]
E3U44_02050
Enzymes [BR:
nwr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
E3U44_02050
Peptidoglycan biosynthesis and degradation proteins [BR:
nwr01011
]
Precursor biosynthesis
Amino acid ligase
E3U44_02050
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Paralog
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QBQ56415
UniProt:
A0A4V1AWF1
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All DBs
Position
complement(412756..414309)
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AA seq
517 aa
AA seq
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MATEGQGTIMTEPVDRSCWLSALLAELVSVGVAQDRRINRLSLDSRRVGPGALFLACRGM
RQSGHDYIGAAVGQGAVAVVYDPIIPLSPLIHAGLQAQKVPLIALPDLGARVGVIAARFY
LQPSQKLCVIGVTGTNGKTSVSHFLAQALHQQETPCGLMGTLGRGLIGTLQPSPLTTPDA
VTVQEQLAATRAAGGRYAVMEVSSHALEQGRINGVVFNTAIFTNLSREHLDYHGDMSRYR
AAKFRLFGQPGLRHAVINVDDATGKGFLAHLPAEVAVISYGLTNPQASLRANEFHCDRRG
IVMNIQGPWGEGELVCPLLGRFNAYNLLATLGGLLTTGMPFAEALRRLSQVRAVAGRMEP
MGGVEGEPLLVVDYAHTPDALEQALRSLRAHLEPGARLWCVFGCGGNRDRGKRPLMGAVA
ERWADFVMLTDDNPRDEDPCQIITEILSGVEMPDRVYQLRDRAEAIIRAVQLAGPKDIVL
IAGKGHEEYQQVSAEQRPFSDRKQAQQALQQRRGGLR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagaaggacaggggacgataatgacggagcccgtggatcggagctgttggtta
agcgctttgctggcggagttggtgtctgtcggagtagcgcaggaccggcggatcaaccgc
ttgtctctagatagccgccgagtcggtccaggagcgctatttctggcttgccgaggaatg
cggcagtcgggccacgactatatcggcgccgctgtgggtcagggcgctgtggcggtagtt
tacgatccgatcattcccctttctccccttattcatgccgggctgcaagcccaaaaggta
cctctaattgccttgcctgatttgggcgctagggtgggggtgattgccgctcggttttac
ctccagccgtcgcaaaagctctgtgtcatcggggtgacgggcaccaacggtaagacttcc
gttagccattttttagcccaggccctccatcagcaggagactccttgcgggctaatgggg
accctcggtaggggcttgatcgggaccctccagcctagcccactgactactccagatgcc
gtcaccgtgcaggaacaattggcggcaacgagggctgccggaggccgttatgcggtgatg
gaggtttcctcccacgccctggagcaagggcggatcaatggggtggtttttaataccgct
atctttaccaacttaagccgtgagcatctcgattatcacggcgatatgagccgctatagg
gctgccaagtttcgcctctttgggcagcctggattacgccacgccgtcatcaatgttgat
gatgccacagggaaggggtttttagcccatcttcctgccgaggtcgccgttatcagctat
ggattgactaatcctcaggccagccttcgggccaatgagttccattgtgatcgccgcggc
atcgtcatgaacattcaagggccctggggggaaggcgaattggtttgccccttactaggc
cgcttcaatgcttataacctgcttgctaccctgggtggcttattgactacggggatgccg
tttgctgaggcgctgcggcgcctttctcaggttcgggcagttgcgggacgcatggaaccc
atggggggggtggaaggggaacctttactggttgtggattatgcccataccccggatgcc
ctcgagcaggctttgcgctctttgcgggcccacttagagccgggggcacggttatggtgt
gtcttcggttgcggggggaatcgggatcgcggtaaacgtcccttgatgggggcagtggct
gaacgttgggctgattttgtgatgctgactgacgacaatccccgagatgaggacccctgc
caaatcattaccgagattctctctggtgtggagatgccggatagggtttatcagctcagg
gaccgggctgaggcaatcatccgtgccgtgcaattggcaggacctaaagacattgtgctt
attgcgggaaaagggcacgaagaatatcagcaagtcagtgccgagcagcggccctttagt
gaccgaaagcaagcacagcaggcattgcagcagcggagaggggggctgcgctga
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