Nocardia yamanashiensis: LTV02_13745
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Entry
LTV02_13745 CDS
T07935
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
nya
Nocardia yamanashiensis
Pathway
nya00270
Cysteine and methionine metabolism
nya00450
Selenocompound metabolism
nya00670
One carbon pool by folate
nya01100
Metabolic pathways
nya01110
Biosynthesis of secondary metabolites
nya01230
Biosynthesis of amino acids
nya04980
Cobalamin transport and metabolism
nya04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LTV02_13745 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LTV02_13745 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LTV02_13745 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LTV02_13745 (metH)
04980 Cobalamin transport and metabolism
LTV02_13745 (metH)
Enzymes [BR:
nya01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
LTV02_13745 (metH)
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GFIT
Motif
Pfam:
S-methyl_trans
Pterin_bind
Met_synt_B12
B12-binding_2
B12-binding
CdhD
Motif
Other DBs
NCBI-ProteinID:
UGT44386
LinkDB
All DBs
Position
complement(2824039..2827617)
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AA seq
1192 aa
AA seq
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MSVRSRAEFDTTLLDTLKQRVVIGDGAMGTMLQAADLTLDDFRGLEGCNEILNETRPDVL
RHIHRAYFEAGADAVETNTFGCNLPNLADYDIADRIRDLSERGTRLAREVADEMGPTSYG
TPRYVLGSMGPGTKLPTLGHAPYVTLRDAYTEAALGMLDGGADAILIETCQDLLQVKAAV
TGSHNAMLQAGRRIPIITHVTVETTGTMLVGSEIGAALTALEKLGIDMIGLNCATGPDEM
SEHLRHLSKHAQLPVSVMPNAGLPILGANGAEYPLTAEELAVAMTQFVSEFGLAMVGGCC
GTTPEHIRQVAEAVREVTPAVRKPVHEPSVSSMYTQVPFEQDASILMIGERTNANGSKAF
REAMLAEDWQKCLDIAKDQTRDGAHMLDLCVDYVGRDGTKDMTELASRLATASTLPIMLD
STETPVLKAGLEHLGGRCAVNSVNFEDGDGPESRYQQTMALVAEHGAAVVALTIDEEGQA
RTAEHKVAIAERLIADITGNWGLDESDIIIDTLTFTLGTGQEESRRDGIETIEAIRELKR
RHPNVQTTLGLSNISFGLNPAARQVLNSVFMHECVEAGLDSAIVHASKILPMARIPEEQR
QTALDLVYDRRTEDYDPLQKLMALFEGVSTASSKASRAEELAALPLFDRLARRIVDGERG
GLEADLDEAMKEVPPLQIINETLLSGMKTVGELFGSGQMQLPFVLQSAEVMKTAVAHLEP
HMEATDDSGKGRIVLATVKGDVHDIGKNLVDIILSNNGYEVVNLGIKQPISAILDAAVDK
KADVIGMSGLLVKSTVIMKENLEEMNSRGVSEQFPVLLGGAALTRAYVEQDLTEVFEGDV
HYARDAFEGLRLMDEIMTVKRGGGIDRNSPEAIAEREKAAERKARHERSKRIAEQRKAAE
VPVQVPARSDVAAGLPVPVPPFWGTRIVKGLSVNEYSGLLDERALFLGQWGLRGQRGGDG
PSYEELVETEGRPRLRYWLDRLTSSGVLQHAALVYGYFPAVSEGGDVIVLTEPKPDAPER
YRFTFPRQQRDRFLCIADFIRSREDAERTGQVDVLPFQLVTMGQPIADFANELFADNNYR
DYLEVHGIGVQLTEALAEFWHRRIREELTLEGHSVADEDPSDVLDYFKLGYRGARYSFGY
GACPDLEDRAKLVDLLDAGRIGVMLSEELQLHPEQSTDAFVLLHPEAKYFNA
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacgcagccgcgccgaattcgacaccaccctactggacacgttgaaacaacgt
gttgtgatcggggacggtgcgatgggcaccatgctgcaggccgcggatctcacgctcgat
gatttccgtggcctcgagggctgcaacgagattctcaacgaaacccgccccgacgtgctg
cgacacattcaccgcgcgtacttcgaggccggtgccgacgccgtcgagaccaataccttc
ggatgcaatctccccaacctcgccgactacgacatcgcggaccggatccgcgatctgtcc
gagcgcggcacccgcctcgcccgtgaggtcgccgacgagatgggccccaccagctacggc
accccgcgctatgtgctcggctcgatgggcccgggcaccaagctgccgaccctgggtcac
gcgccctacgtcacgctccgcgacgcctacaccgaggccgcgctcggcatgctcgacggc
ggcgcggacgccatcctgatcgagacctgccaggacctgttgcaggtcaaggccgccgtc
accggcagccacaacgccatgctgcaggccgggcgccggattccgatcatcacccacgtg
accgtggagaccaccggcaccatgctggtcggttcggagatcggcgcggcgctcaccgcg
ctcgagaagctcggcatcgacatgatcgggctgaactgcgccaccggcccggacgagatg
agcgagcacctgcggcatctgtccaagcacgcccagctgccggtgtcggtgatgccgaac
gccggcctgccgatcctgggcgcgaacggggccgaatatccgctcaccgccgaggaactc
gcggtcgccatgacccagttcgtgtccgagttcgggctggccatggtcggcggctgctgc
ggcaccacccccgagcacatccggcaggtggccgaggcggtgcgcgaggtgacgccggcg
gtgcgcaagccggtgcacgagcccagcgtgtcctcgatgtacacccaggtgccgttcgag
caggacgccagcatcctgatgatcggcgagcgcacgaatgccaacggctccaaggcattc
cgcgaggccatgctggccgaggactggcagaagtgcctggacatcgccaaggaccagacc
cgcgacggcgcgcacatgctcgacctgtgcgtcgactacgtgggccgcgacggcaccaag
gacatgaccgagctggcttcccggctggccaccgcgtccacgctgccgatcatgctggac
tccaccgaaaccccggtgctgaaggccggtctggagcatctgggcgggcgctgcgcggtc
aactcggtcaacttcgaggacggtgacggaccggagtcgcggtatcagcagaccatggcg
ctggtcgccgaacacggtgcggccgtggtggcgctgaccatcgacgaagagggccaggcg
cgcaccgccgagcacaaggtggccatcgccgagcggctgatcgccgatatcaccggcaac
tggggtctggacgagtccgacatcatcatcgacacgctgaccttcaccctgggcaccggc
caggaggagtcgcggcgggacggcatcgaaaccatcgaggccatccgggaactcaagcgg
cggcacccgaatgtgcagaccacgctgggtctttcgaatatctccttcggcctgaacccc
gcggcccggcaggtgctcaactcggtgttcatgcacgagtgcgtggaggccggactggat
tcggccatcgtgcacgcctccaagatcctgcccatggcgcggattcccgaggagcagcgc
cagaccgccctggacctggtctacgaccggcgcaccgaggactacgacccgctgcagaag
ctgatggcgctgttcgagggcgtgtccacggcttcctccaaggcctcgcgcgccgaggag
ctggcggcgctgccgctgttcgaccggctggcccggcgcatcgtggacggcgagcgaggc
ggcctcgaggccgacctcgacgaggccatgaaagaggttccgccgctccagatcatcaac
gaaacgctgctgtccggtatgaagacggtcggtgagctgttcggctcgggtcagatgcag
ctgccgttcgtgctgcagtccgccgaggtgatgaaaaccgcggtggcgcatctggaaccg
catatggaggccaccgacgactcgggcaagggccgcatcgtgctcgccaccgtcaagggc
gacgtgcacgacatcggcaagaacctggtcgacatcatcctgtccaacaacggctacgag
gtcgtgaatctcggtatcaagcagccgatctcggcgatcctcgatgccgcggtggacaag
aaggccgacgtcatcggcatgtccgggctgctggtgaagtccacggtgatcatgaaggag
aacctcgaggagatgaactcccgcggtgtctccgaacagttcccggtgctgctgggcggt
gcggcgctcacccgcgcctatgtggagcaggatctgaccgaggtgttcgagggcgatgtg
cactacgcgcgcgacgcgttcgagggcctgcggctgatggacgagatcatgaccgtcaag
cgcggcgggggcatcgaccgcaattcgccggaggccatcgccgaacgcgagaaggccgcc
gaacgtaaagcccggcatgagcgctccaagcgaatcgcggagcagcgcaaggccgccgag
gtgccggtgcaggtgccggcgcgctcggacgtggccgccggcctgccggtgccggtgccg
ccgttctggggcacccgcatcgtcaaggggctctcggtgaacgagtactccggtctgctc
gacgagcgcgccctgttcctgggtcaatggggcctgcgcggccagcgcggcggcgacggg
ccgtcctatgaggaactggtggagaccgaaggccgtccgcggctgcggtattggctggac
cggctcacctcctcgggcgtgctgcagcatgccgcgctcgtctacggctacttcccggcg
gtctccgagggcggtgatgtgatcgttctcaccgagccgaaacccgatgcgccggaacgg
tatcgcttcactttcccgcgtcagcaacgcgaccggttcctctgcatcgcggatttcatt
cgctcgcgggaagacgcggagcggaccggccaggtggacgtcctgccgttccagctggtc
accatgggtcagcccatcgccgacttcgccaatgagctgttcgcggacaacaactatcgc
gactacctcgaggtgcacggcatcggcgttcagctcaccgaagccctcgccgagttttgg
caccggcggatccgggaagaactgaccctggagggacattccgtcgccgatgaggatccg
tccgatgtgctggattacttcaaactcggataccgtggcgcgcggtactcgttcggttac
ggcgcctgccccgacctggaggatcgcgccaagctcgtcgacctgctcgacgcgggacgg
atcggagtgatgctgtcggaggagttgcagctgcatccggagcagtcgacggatgctttc
gtcctgttgcacccggaagcgaagtacttcaacgcctaa
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