Niabella yanshanensis: U0035_21645
Help
Entry
U0035_21645 CDS
T09723
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
nyn
Niabella yanshanensis
Pathway
nyn01501
beta-Lactam resistance
nyn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0035_21645
01503 Cationic antimicrobial peptide (CAMP) resistance
U0035_21645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nyn02000
]
U0035_21645
01504 Antimicrobial resistance genes [BR:
nyn01504
]
U0035_21645
Transporters [BR:
nyn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
U0035_21645
Antimicrobial resistance genes [BR:
nyn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U0035_21645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
EMC4
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WQD38279
LinkDB
All DBs
Position
5231572..5234703
Genome browser
AA seq
1043 aa
AA seq
DB search
MNISELSLRRPVLAIVMNVVIIVFGVIAFKFLGVRDYPAIDPPNIGVRTTYAGANADIIE
SQITEPLEDAINGIPGIRNITSSSSNGSSSINVEFDVGVDLEAAANDVRDKVAAAQRQLP
PDLEAPSSVSKADASAEPILSMTVQSDTKNPLELTEYANNILIDRLQTIPGVSSIDTWGE
KRFAMRLWLDPNKMAAFDITPEEIQSALQRENIELPSGKLTGDNTELTIRTFGRLDTEEE
FANIVVKNVNGSDIRVKDVANVVLGPENEESQLKESAVPMVALAIVPQPGANYVSISDEF
YKRLEDIKKEVPADIKLNIALDQTEYIKKSILEVEETLVIAIGLVVLIVYLFFRDWLLSI
RPLIDIPVSLIGAFFIMYIMGYTINVLTLLAIVLATGLVVDDGIVVTENIFKKLEQGMSK
RKAALEGSKEIYFAVIATSITLSVVFLPIVFLEGFVGRLFREFGIVVAGAVLISAFVSLT
LTPVLNVFISKKDVHKHSWFYLKTEPFFTGMESLYERTLKAFMKLRWIAWLVIAACFVVI
YFLFTNIQSELAPMEDKSQFRLSLTAPEGTSFLAMDQYVNKVSQFLIDSVPEHEIVLSIT
GSRMSGAANNGMIRVRLVKPGERDRSQKEIVEYVNKHVSKYTEARAFANQDQTIQVNRRG
GQAVQFVLQNNDFDKLSEILPQFLEEANKSDILTQVDADLKFNKPELRVHVDRLKAAQLG
VSIADVSQALQTAYSNQRLGYFTRSGKQYQVMAQVDRIDRDDPNDLKKIFVRNNAGQLIS
LDNITNSVESTTPPTIYRFNRYKSATVSANLAEGYTVGDGVKEMDRIANKLLDETFTTSL
TGSARDFAESSGNTMFALLLAIGLIYLILAAQFESFIDPFIIILTVPMAFAGAFISLWIF
GQTFNIFSQIGMIMLIGLVTKNGILIVEFANQSREKKGMGKTEAVVYAAGQRLRPILMTS
LAMALGALPIAMSLGAAATSRIPLGIVIVGGIIFSLVLTLYVLPAIYSYMASGKEVKTFE
EVLADEEKELVKTNEEAAHDQKH
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatttctgaattaagtttaagaaggccggtgctggcgatagtgatgaatgtggtc
attatcgtatttggtgtgattgcctttaaatttttgggggtaagagattacccggcaatt
gaccctcccaatattggtgtgcgaactacgtatgcaggagccaatgcagatattatagaa
tcgcagattaccgaacccctcgaagacgccattaacggtatcccgggcatccgcaatatc
acttcgagcagtagtaacggaagcagcagtatcaacgtagaatttgacgtgggtgtggac
ctggaagcggcggctaatgatgtaagagataaagtagcggcggcgcaaagacaattgccc
cctgatctggaagcaccgtcgtcagtaagcaaggctgatgccagtgcagaaccgattctt
tcgatgactgtacaaagcgataccaagaatccgctggagcttaccgagtatgccaataat
attttaatcgaccgtttacaaaccataccgggtgtaagcagtattgatacctggggtgag
aaaagattcgccatgcgcctttggctggatcctaataaaatggcagcttttgacattaca
cctgaagaaattcagtccgctttacaaagagaaaatatagaactgccttcgggaaaacta
accggagataatacggaactgaccattcgtacttttggccgtctggatacagaagaagag
tttgccaatatcgtggtaaaaaatgtgaacggaagcgatatccgtgttaaagatgttgca
aatgtggtactggggcctgaaaacgaggaatcgcagttaaaagaaagtgcagtaccaatg
gtggcgctcgctattgttccacagccgggcgctaattatgtatctatttcagatgagttt
tataagcgcctggaggatattaaaaaagaagtacctgctgatattaagctgaatatagcg
ttggatcagacggaatatatcaaaaaatcgattcttgaggtagaagagacgctggtaatt
gcaattggactggtggtattaattgtatacctgtttttccgggactggttattatctatt
cgtccgctgattgatattcctgtgtcattaatcggagccttctttattatgtatatcatg
ggatatactattaatgtattaacgctgttggcaattgtcttggcgacaggattagtggta
gatgacggtatagtggtgacggagaatatctttaagaagctggagcagggcatgagcaag
cgcaaggctgcgctggaaggatcaaaagaaatttactttgcagtaatagctacgtctatt
acgctttcagtagtgtttttgccaatcgtgttcctggaaggtttcgtgggtcgcctattc
agggagtttggtattgtagtggccggcgccgtattgatctcggcatttgtatcgctgacg
ttaaccccggtgctcaacgtgtttatttccaagaaagatgtgcataagcattcgtggttc
tatctgaaaacagaacctttttttacgggtatggaaagcctgtatgagcgaaccctgaaa
gcatttatgaaattgcgctggattgcctggctggtgatcgcagcctgttttgtggttatt
tatttcctgtttaccaatattcaatcggagctggccccgatggaagataaaagccagttc
aggctaagtttaaccgcacctgaagggacttctttcctggccatggatcaatatgtaaac
aaggtttcacaattcctgatcgattcggtaccagagcatgaaattgtgctttcgataacc
ggttcgagaatgagtggggccgctaataacggtatgatccgggtaaggttggtgaaacct
ggtgagcgggatcgctcacaaaaagaaatagtggaatatgtaaataaacatgtttccaag
tacacggaggccagggcttttgccaatcaggatcaaacgatacaggtgaaccgtcgtgga
gggcaggcagtgcaatttgtattacagaataacgacttcgataaactttcggaaatattg
cctcagtttttagaagaggctaataaaagcgacattctgacccaggtagatgcggatttg
aaatttaataaaccggagctgcgtgttcacgtggacaggttgaaagcagcacagctgggt
gtttccatcgcagatgtatcgcaggcacttcaaaccgcttacagtaatcagcgcctggga
tattttacccgcagtggtaagcaataccaggtgatggcgcaggtagacaggatagacagg
gatgatcctaatgacctcaaaaagattttcgtgcgcaataatgcggggcaattgatcagc
ctggataatattaccaactcggttgaatctaccacaccgcctactatttaccgtttcaac
cggtacaaatcggcaacggtgtctgccaacctggctgaaggatacacggtaggtgacggg
gttaaggaaatggaccgaattgcaaataagttactggatgaaacctttacaacctcttta
accggttcggcccgcgattttgcagagagcagcggtaataccatgtttgctttattgctg
gccattggattaatatacctcatccttgccgcacagttcgaaagctttattgatcctttc
attattatccttaccgtacccatggcctttgcaggagcttttatttccctgtggatattt
ggccagacctttaatatcttttcacaaataggtatgattatgctgattgggctggtaacc
aagaatggtatattgatagtcgaattcgctaaccagagccgcgagaaaaagggcatgggt
aaaacggaagccgtggtctatgccgccggtcagcgtttacgtcctatcttaatgacgagc
ctcgcaatggctttgggtgccttaccgatcgcaatgtcgttgggcgccgccgcaaccagc
cgtattccgttaggtattgtgattgtaggaggtattatattttcgctggtacttacatta
tatgtattaccggccatttatagttacatggcatcgggtaaggaagtgaaaacttttgaa
gaagtgctggcggatgaggagaaggaactggttaaaacaaatgaggaggcggcgcatgat
caaaaacattaa
DBGET
integrated database retrieval system
