KEGG   Ornithorhynchus anatinus (platypus): 100078687
Entry
100078687         CDS       T01045                                 
Name
(RefSeq) TAR DNA-binding protein 43
  KO
K23600  TAR DNA-binding protein 43
Organism
oaa  Ornithorhynchus anatinus (platypus)
Pathway
oaa03015  mRNA surveillance pathway
oaa05014  Amyotrophic lateral sclerosis
oaa05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100078687
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100078687
   05022 Pathways of neurodegeneration - multiple diseases
    100078687
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oaa03019]
    100078687
Messenger RNA biogenesis [BR:oaa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     100078687
SSDB
Motif
Pfam: TDP-43_C TDP-43_N RRM_1 RRM_7 RRM_PARP14_3 RRM_3 RL RRM_5
Other DBs
NCBI-GeneID: 100078687
NCBI-ProteinID: XP_001515396
Ensembl: ENSOANG00000013320
UniProt: F7EDX1
LinkDB
Position
5:complement(67352243..67369662)
AA seq 414 aa
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDIKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLG
NNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGNMQ
REPNQAFGSGNNSYSGSNSGAAIGWGSTSNAGSGSGFNGGFGSSMDSKSSGWGM
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtcggagtacattcgggttacagaagatgagaacgacgagcccattgagatcccatcc
gaggatgatggcaccgtgctcctctccaccgttacggcccagttccccggggcgtgtgga
ctgcgctacaggaatccagtgtctcagtgtatgagaggcgtccggctagttgaagggata
ctgcacgcccctgatgccggctgggggaatctggtgtatgttgtcaactatcccaaagat
aacaagaggaaaatggatgaaacagatgcctcgtctgcagttaaagtgaaaagggcagta
cagaagacatctgatttgatagtcctaggtcttccctggaaaacaacggaacaggaccta
aaagaatattttagtacttttggagaagttctcatggtgcaggtcaagaaagacattaaa
accggccattcaaagggatttggttttgttcgctttacggagtatgaaacacaggtcaaa
gtgatgtcacaacgacacatgatagatggacgatggtgtgactgtaaacttcctaattct
aagcaaagtccagatgagcctttgagaagcagaaaggtgtttgttgggcgttgtacagaa
gatatgaccgcagatgagttgcgccagtttttttgccagtatggagaagtggtagatgtc
ttcatccccaaacctttcagggcttttgcctttgttacatttgcagatgatcaggttgcg
cagtctctttgtggcgaggacttgatcattaaaggaatcagcgtacatatatccaatgct
gaacctaagcacaatagcaatagacagttagaaaggagcggaagattcggtggcaatccg
ggcggttttgggaaccaggggggctttggaaacagtcggggagggggagccgggttggga
aacaatcagggcagtaacatgggtggggggatgaacttcggggcttttagcatcaaccct
gccatgatggccgcagcccaggctgcgctgcagagcagctgggggatgatgggcatgcta
gctagtcagcagaaccagtcgggcccgtcagggaacaaccagagccaaggcaacatgcag
agggagccgaaccaagcattcgggtcgggaaacaactcgtacagtgggtctaactccggc
gccgcgatcggctgggggtccacgtcaaacgcagggtcgggcagtggctttaatggaggc
tttggctcaagtatggattccaagtcctcgggctgggggatgtag

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