Ornithorhynchus anatinus (platypus): 100078736
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Entry
100078736 CDS
T01045
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04140
Autophagy - animal
oaa05014
Amyotrophic lateral sclerosis
oaa05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100078736 (SMCR8)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100078736 (SMCR8)
05022 Pathways of neurodegeneration - multiple diseases
100078736 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oaa04131
]
100078736 (SMCR8)
Membrane trafficking [BR:
oaa04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
100078736 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
100078736
NCBI-ProteinID:
XP_001509598
Ensembl:
ENSOANG00000009874
UniProt:
F6Z062
LinkDB
All DBs
Position
2:complement(33752640..33766485)
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AA seq
945 aa
AA seq
DB search
MISAPDVVAFTKEEEYEDEPRHEPSLPEEYSVPLFPFASQGANPWSRLSGAKFARDFILI
SEFSEQVGPQPLLTVPNDAKVSGTFDLNYFALRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISTDEHKIMRQFQELSAEFSEAS
ERLKKGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELASVE
KSIIEHQDLLKQIRSYPSRKPKESDRRPFGPEGPREPVAPNFDGAPATSNPDELAETNLY
ARRASYTPKLIKAKSAKCFDKKLKTLEELCDTEFFTQTLAQLSHIEHMFRGDLCYLLTSQ
IDRALLKQQCITNFLFEDLVDFDETVAKKQDDVRLEPDPEGCQSRSLEEYPVPKVFISMG
SYKSSVESVPIKMEAELEQDPGGDEATESSVYGHRENLDYLDMDMKGSVSSGESIEVLGT
EKSSSALPKSDSQTSLTAPLSPQVVRSRAVSRRTISEDSIEVLSTCPSESLIPGDFKASY
PSAINEEEPCAEEPRAEDEEGGIRFSAGGSLRDVSEAEGGGESPLTQSDSTCCIGKESPG
LLAPHPALTQQPCDDDGVVSIPPRPYRQREPGFHVDFTVEDLGCPSRDEAPGGSLPHEVE
PGRPDGGRDISRMSLDEYSDSTSHVSSSAASTGSDRTPSPACQAGHSERHRKRAGQNALK
FIRQYPFAPPAIYSLLSGRTLVVLGEEEAIVRKLVTALTIFVPNYGRSTKPVKHWLTTPL
HITDFQKWKLIGLQRVTSPAGVNTLHALNRYSRYTSVLDLDNKTLCCPLYRGTLVPRLAD
HRTQIKRGSTYYMHVQSLLTQLCSKAFLFTFCHHLHLPVNEKETEEAVLGRQMNFLKLQL
GLVNEDVKVVQYLAELLKLQYVQGPSRDRNPVLRFDYVPSSLYKI
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgacgtggtggcttttaccaaagaggaagagtacgaggacgagccc
cgccatgagccgtcgctgcccgaggagtattcggtgccgctctttcccttcgccagccag
ggggccaacccgtggtccagactgtcgggggccaagtttgccagggacttcatcctcatc
tccgagttctcggagcaggtgggtccccagcccctgctgaccgtccccaatgacgccaag
gtctccggcaccttcgacctcaattacttcgcgctgcggatcatgtccgtggactaccag
gcctctttcgtggggcacccgccggggagcgcctaccccaagctgaacttcgtggaggac
tccaaagtcgtgctgggggactccaaggaaggggccttcgcgtacgtgcaccacctcacc
ctttacgatctagaggcccggggcttcgtgaggcccttctgcatggcctacatttccacc
gacgagcacaagatcatgcggcagttccaggagctctcggcggagttctccgaagcgtcc
gagcgcttgaagaaggggaaccggaaggccttcgccggtgaactcgagaagaaattgaag
gacctggactacaccaggaccgtgctgcacaccgagacggagatccagaagaaagccaac
gacaaggggttctactcctctcaggccatcgagaaggccaacgagctggccagcgtggaa
aagtccatcatcgagcatcaggatctgctaaagcaaatcaggtcttacccctcccgcaag
ccgaaggagtccgatcgccgccctttcgggccagagggtccccgggagccggtcgccccg
aactttgacggggcacccgctacctccaaccccgacgagctcgcggaaaccaacctctat
gcccgcagggcctcctatacccccaagctcatcaaggccaagtccgccaaatgtttcgac
aaaaagctgaagaccctagaagagctctgcgataccgagtttttcacccagactctggct
cagctgagtcacatcgaacacatgttcagaggggacctgtgctaccttctgacgagtcag
attgaccgagcgcttttaaagcagcagtgcatcacgaacttcctcttcgaagacctggtg
gatttcgacgagacggtggcgaagaagcaggatgatgttcggctggagcccgatccagag
gggtgccagtcccggtctttggaagaatatccggtccctaaagtcttcatcagcatgggg
tcttacaagtccagcgtggagtccgtacctatcaaaatggaggcggagctcgaacaggac
cccggaggcgatgaggcgaccgaatctagcgtgtacggccaccgggagaacctggattac
ctggacatggatatgaaaggcagcgtcagtagcggcgaaagcatcgaggtcctggggacg
gaaaagtcctcttccgccctgcccaagtccgacagccagacgagcttgacggcccccttg
agcccgcaggtggtccggagcagggcggtcagccgacggaccatcagcgaagacagcatc
gaggtcctcagcacgtgtccctccgagtcgttgatccccggcgacttcaaagcgagctac
ccgagtgccatcaacgaagaagagccctgcgcggaggaaccgcgtgcagaggacgaagag
ggagggattcgcttcagtgccggcgggagcctccgagacgtcagcgaggccgagggcggc
ggggaaagccccttgacccagtcggactcgacctgctgcatcgggaaagagagtcccggt
ctcctggcgccccatcccgccctcacccagcaaccctgtgacgacgacggggtggtcagt
atccccccacggccctataggcagagggaaccgggcttccacgtggacttcacagtcgag
gacctcggctgtccgtcccgggatgaggcccccggaggctccctgcctcatgaggtggag
ccgggccgcccggacggcggccgagacatcagcaggatgagcctggacgaatactccgac
tccaccagccacgtgagcagtagcgcggcctccaccggttccgaccggaccccctctccg
gcttgtcaagccggccactccgagcggcacagaaagagggcggggcagaacgcgttgaag
tttatccggcagtaccccttcgcccctccggcaatctactctctgctcagtgggaggacc
ctggtcgtgctgggggaagaagaagcgatagtgaggaagctggtgacggctctgaccatc
tttgttccgaactatggcaggtccaccaagcccgtgaaacactggctcaccacccctttg
cacataacggattttcagaagtggaagctaattggcttacagagggtgacctccccggcc
ggtgtcaacaccctgcacgctctgaaccggtacagccgctacaccagcgtcctggatctg
gacaacaagaccctgtgctgccccctctaccgcggaaccctggtccctcggcttgccgac
caccgcacgcagatcaagcgggggagcacctactacatgcacgtccagagcctcctgacc
cagctgtgttccaaggccttcctcttcaccttctgtcaccacctgcacctgcccgtcaac
gagaaggagaccgaggaggccgtcctgggccggcagatgaacttcctcaagctgcagctg
ggcctggtgaacgaggacgtcaaggtggtgcagtacctggccgagctgctcaaactgcag
tacgtccaagggccctccagggaccggaacccggtgctcaggtttgactacgttcccagc
tctctgtacaaaatctaa
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