Ornithorhynchus anatinus (platypus): 100079454
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Entry
100079454 CDS
T01045
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03272
Virion - Hepatitis viruses
oaa04144
Endocytosis
oaa04913
Ovarian steroidogenesis
oaa04925
Aldosterone synthesis and secretion
oaa04927
Cortisol synthesis and secretion
oaa04934
Cushing syndrome
oaa04976
Bile secretion
oaa04979
Cholesterol metabolism
oaa05145
Toxoplasmosis
oaa05160
Hepatitis C
oaa05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100079454 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100079454 (LDLR)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
100079454 (LDLR)
04925 Aldosterone synthesis and secretion
100079454 (LDLR)
04927 Cortisol synthesis and secretion
100079454 (LDLR)
09154 Digestive system
04976 Bile secretion
100079454 (LDLR)
04979 Cholesterol metabolism
100079454 (LDLR)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
100079454 (LDLR)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100079454 (LDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100079454 (LDLR)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100079454 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oaa04131
]
100079454 (LDLR)
Membrane trafficking [BR:
oaa04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100079454 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
cEGF
FXa_inhibition
SGL
EGF_CA
EGF_3
EGF
hEGF
Psg1
TMEM154
Motif
Other DBs
NCBI-GeneID:
100079454
NCBI-ProteinID:
XP_001510419
LinkDB
All DBs
Position
X2:complement(9965644..9992234)
Genome browser
AA seq
872 aa
AA seq
DB search
MRQVKYIATLVSLILIFIPDQTAARYAAVNKCERNEFQCRDGRCISYKWICDGTAECLDE
SDESPDTCLSVTCKPEEFSCGGRINRCISLSWKCDSQTDCENGSDEKYCPPKTCASDKFR
CRNGKCISQEFVCDKDNDCEDGSDEESCPVPTCSPAMFQCNNSACIPKLWICDGDHDCDD
GSDEWPQNCHGHDKVKETKPCSLLEFHCGSRECIHMNWQCDGDFDCKDKSDEQNCVKATC
RPDEFQCNDGTCVHGSRQCDKEYDCKDMSDEIGCANVTLCDGPNKFKCHSGECITQDKVC
NAHRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPDGFQLVDQKRCEDID
ECQIPETCSQICRNLEGSYKCECNEGYEIDPITKTCKAIGTIAYLFFTNRHEVRKMTLDR
SEYTSLITNLKNVVALDVEIASNKIYWSDLAQNKIYSTEIDKAHNLTHDTVIGEDIQAPD
GIAVDWIHGNIYWTDSVPGTISVADTKGSKRKTLFKQELAKPRAIVVDPMQGFMYWTDWG
TPAKIEKGGLNGVDSFPLVTEEIQWPNGLTLDLSNGRLYWVDSKLHSISSVDVNGGNRKT
VLENQNKLAHPFSLAVFEDKVFWTDIMNEAIFSANRFTGSDINVVAENLISPEGIILYHN
LRQPTGENWCEKNHIPNGGCQFLCLPAPQINQHSPKYTCVCPDGMQLAEDMRKCTKGAVS
PHVSTTRSTTQQITTLARLVTTVTSPEQKTRLQPSTTELLIKHPKGFPDLTTPEMVTMSQ
QAAQSDIAAETNQEKQGGPTALSIVLPLVLFILICFGAFLVWKNWRLKNINSINFDNPVY
QKTTEDEIHICKSQDGYTYPSRQIVSLEDDAA
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgagacaagtgaaatatatagcaaccctggtgagcttgatattaattttcatcccggat
caaactgctgcgagatatgcagcagtgaacaagtgtgagagaaatgaattccagtgcaga
gatgggcgttgtatctcttacaagtggatatgtgatggcactgccgagtgcctggatgaa
tctgacgaatcaccagatacttgcttgtctgtaacctgcaagccagaagaattcagctgt
ggcggccgaatcaatcgttgcatctccttatcctggaaatgtgactcccagacggactgt
gaaaacggctcagatgagaagtactgccctcctaaaacctgtgccagcgataagttccgg
tgccgcaatggaaagtgcatttctcaagagtttgtctgtgacaaggacaatgactgtgag
gatgggagtgatgaagagtcctgccctgtccctacctgtagccctgccatgttccagtgc
aacaactctgcatgcattcccaagctgtggatctgtgacggtgaccatgactgtgatgat
ggctcggatgaatggcctcagaattgtcatgggcatgataaagtcaaagaaactaaaccg
tgctctctcctggagttccactgtgggagccgggaatgcatccacatgaattggcagtgt
gatggggattttgactgcaaggacaaatcagatgagcagaattgtgtaaaagcaacctgc
cgcccagatgaatttcagtgcaacgatgggacgtgtgtacatggcagtcggcaatgtgac
aaggagtatgactgcaaagacatgagtgatgagattggctgtgccaacgtaacattgtgt
gatggtcctaacaagtttaaatgccacagtggagaatgcatcactcaggacaaagtttgc
aatgcccacagagactgcagagactggtctgacgaacctctcaaggagtgtggtacaaat
gagtgcctagataacaaaggagggtgctcccatatatgtaatgacctcaagattggctat
gagtgcctctgcccagatggtttccaattagttgatcagaaaagatgtgaagatattgat
gaatgccagatcccagagacctgtagccagatctgcaggaatcttgaaggaagttacaag
tgtgaatgtaatgaaggatacgagattgacccaatcaccaaaacctgtaaagcaattggc
actattgcatacctctttttcaccaatcgccacgaagtgaggaaaatgactctggatcgg
agcgagtacactagtctcattacaaatctaaagaatgtggtggccctagacgtagagatt
gccagcaacaaaatctactggtctgacctagcacaaaataagatctacagcactgaaatt
gacaaggctcacaacctcacccacgacactgtgatcggtgaggatattcaagccccggat
ggcattgcggttgactggattcacggcaacatctactggacagactcagttcctggcacc
atttctgtggctgatactaaaggctcaaagagaaaaactctgttcaagcaggaattggct
aaaccccgagctattgtagtggatcctatgcaaggtttcatgtactggactgactgggga
actcctgctaagattgaaaaagggggtctgaatggagttgacagtttcccactggtgact
gaagaaatccaatggcctaatggacttactctagatctttcaaatggacgtctatactgg
gtagactcgaagctccactcgatctcaagtgttgatgtcaacggtggaaataggaagaca
gtgcttgagaatcaaaataaactagctcacccattttccctggcagtctttgaggataaa
gtattttggacagatatcatgaatgaagctattttcagtgcaaaccgcttcactggatct
gatattaatgtggtggctgaaaatttaatatctcccgagggtatcatcctatatcacaac
ctgagacagcctacaggtgaaaactggtgtgagaagaatcatattcctaatggaggttgc
cagtttttgtgcctccctgctccacaaatcaaccaacactcacctaagtatacctgtgtc
tgtcctgatggaatgcaactagcagaagatatgagaaaatgtactaaaggtgctgtatca
cctcatgtttctaccacgagaagcacaacacagcagattaccacccttgctcgattggta
actaccgttacatccccggagcagaaaaccagactccagccttccactaccgaattattg
atcaagcacccaaagggtttccctgatcttactacaccagagatggtcacaatgtctcaa
caagcagcgcaaagtgatattgctgcggaaacaaatcaggagaagcaaggcggtcctaca
gccctgtctattgtcctgccactagtcctattcattttaatttgttttggtgccttcctt
gtgtggaagaactggcggctcaagaacatcaacagcataaactttgacaatcctgtctat
cagaaaaccactgaggatgagattcatatctgtaagagtcaggatggctacacttatcct
tcgagacagattgtaagcctggaagatgatgctgcatga
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