Ornithorhynchus anatinus (platypus): 100079482
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Entry
100079482 CDS
T01045
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100079482 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oaa03000
]
100079482 (KDM2B)
04121 Ubiquitin system [BR:
oaa04121
]
100079482 (KDM2B)
03036 Chromosome and associated proteins [BR:
oaa03036
]
100079482 (KDM2B)
Enzymes [BR:
oaa01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
100079482 (KDM2B)
Transcription factors [BR:
oaa03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100079482 (KDM2B)
Ubiquitin system [BR:
oaa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100079482 (KDM2B)
Chromosome and associated proteins [BR:
oaa03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100079482 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
100079482 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_At1g61320_AtMIF1
LRR_At5g56370
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
100079482
NCBI-ProteinID:
XP_028908757
Ensembl:
ENSOANG00000006859
LinkDB
All DBs
Position
2:18390082..18519009
Genome browser
AA seq
1301 aa
AA seq
DB search
MEAEKESGRRLRSVGRQRYDENEDLSDVEEIVSVRGFSLEEKLRNPRYQGDFVHAMEGKD
FNFEYVQKEALRVPLIFRNKDGLGIEMPDPDFTVRDVKLLVGSRRMVDVMDVNTQRGTEM
SMSQFVRYYETPEAQREKLFNVISLEFSHTKLENVVKRPNVVDLVDWVDNMWPQHLKERQ
TDATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFQGGKIFWLIPPTLHNL
ELYEEWVLSGKQSDIFLGDRVERCQRIELKQGNTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIHEIEDRTRVQAKFRYPFYYEMCWYVLERYVHCLTHRSHLTQECQRESMLI
DATRKASIDGFSSDSWPEMEEESCELHPLEEKEESVDKVPKPPADSSSSPNITPSEGQEP
AGKKPKAPVMRYLKRTLSNESDDSIKSTTPTDYPKTPTGSPATELSTKWTHLTEFELKGL
KALVEKLESLPENKKCVPEGIEDPQALLEDMKNVLKEHADDDQNLAITGMPVVSWPKKTA
KAKLPSQVLDEDFLSNRAVGRPKGKLGPGSAVKLAANRTTAGARRRRTRCRKCEACLRTE
CGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNL
MLMECSICNEIIHPGCLKRKESSCACLEEEGLYLPWSLVQYLVKESDGVVNDELPNCWEC
PKCNHAGKTGKAYKQKRGPGFKYASNLPGSLLKEQKMNRDNKEGLDPAKRKGECEEAVHR
KSEEHVKKPPTDSILRRKSDEVHLRRKRKFEKPQELTTRKRLKLGKEEKLFRKKRRSWKA
TEDRAALANKPLRRFKQEPEEDLPEAPPKSKESDQSRSSSPTAGPSTEGAEGPDKKKLKI
RRKRRLPNKELSKELSKELNQEIQKTENSLANENHQPIKSEPESENEEPKRALSSSERLH
RFSKGLNGTPRELRHQLVPSLRTTPRVIARPPPSLSPPKCIQMERHVIRPPPISPPPDSL
PLDDGAAHVMQREVWMAVFSYLSHSDLCVCMRVCKTWNRWCCDKRLWTKIDLNHCKSITP
LMLSGIIRRQPVTLDLSWTNISKKQLSWLINRLPGLRDLLLSGCSWIAVSALCSSSCPLL
RTLDVQWVEGLKDAQMRDLLSPPTDNRPGQIDNRSKLRNLAELRLAGLDITDASLRLIIR
HMPLLSRLNLSYCNHVTDQSINLLTAVGTTTRDSLMEINLADCNKVTDQCLSFFKRCGNI
CQIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagaaagaatctggaagaagattgcgctcggtcggccggcagagatacgac
gagaacgaggacctgtcggacgtggaggagatcgtcagcgtccggggcttcagcctggag
gagaagctgcgcaacccacggtaccagggggacttcgtccacgccatggagggaaaagat
ttcaacttcgagtacgtgcaaaaagaagccctaagggtgcccctgatcttccgaaataag
gatggcctgggaattgagatgcccgaccctgatttcaccgtcagagatgtgaagctttta
gtggggagccggcggatggtggacgtcatggacgtgaacacacagagaggcacggagatg
agcatgtcccagtttgtgcgctactatgaaacccccgaggcccagcgggagaaactcttc
aatgtcatcagcctggagttcagtcacaccaagctggagaatgtcgtcaagcggcccaac
gtggtggacctggtggattgggtggacaacatgtggccccagcatctgaaggagaggcag
acggacgccaccaacgccatcgctgagatgaagtatcccaaagtcaaaaagtactgtctg
atgagtgtgaaaggctgcttcactgacttccacattgactttggaggcacctctgtctgg
taccacgtttttcagggtgggaagatcttctggctgatccccccgaccctgcacaacttg
gaactgtacgaagaatgggtgttgtcaggcaagcagagcgacatcttcctgggagacagg
gtggaacggtgccaaagaattgagctgaaacaggggaacacgttcttcatcccctcaggc
tggatccatgctgtctacacccccgtagattctctggtctttggtggaaacatccttcat
agctttaatgtgcccatgcagctgcggattcatgagattgaagacagaacacgggtgcag
gccaaattccgttaccctttctactatgagatgtgctggtatgtcctggagaggtacgtg
cactgtctgacccaccgatcccacctcacccaggagtgccagagagaatcaatgctcatt
gatgcaacaagaaaagccagcatagacggcttctcatccgattcctggccggagatggag
gaagaatcgtgcgagctgcatcctctggaggagaaagaggagagtgtggacaaagttccc
aagccgccggccgacagctcctcctcccccaacatcacaccctccgaaggtcaggagcct
gccgggaagaaacccaaagccccagtcatgcggtacctcaaaagaactctgtcgaatgag
tcggacgacagcatcaaatccaccacacccacggactatcccaaaacccccactggatcc
ccggccactgagctctctaccaaatggactcatctcacggagtttgaactgaagggcctg
aaagctttggtggaaaaacttgaatccctcccagagaacaagaagtgtgtccctgagggc
atcgaagatccacaggcactcctggaggacatgaagaatgtgctgaaggagcatgctgat
gatgaccaaaaccttgcaatcactggaatgcccgtggtctcctggcccaagaagacagca
aaggccaagttgccctcccaggttttggatgaagattttctgtcgaaccgggcggtcggg
cggccgaaggggaaactgggcccgggctcggcagtgaagttggccgccaaccggacgacg
gcaggggcgaggcggcggcggacgcgatgccgcaagtgcgaggcctgcctacgcaccgag
tgtggagagtgccacttctgcaaggacatgaagaagtttggggggccaggaaggatgaag
cagtcgtgcatcatgcggcagtgcatcgcgccagtgttaccgcacactgcagtatgtctt
gtgtgtggagaggccgggaaggaggacaccgtggaggaagaagaaggcaagtttaacctc
atgctgatggagtgttccatctgcaatgaaatcatccaccctggatgccttaagcgaaag
gagagcagctgtgcctgcctggaggaagaaggactctatctaccctggagcttagtacag
tacctggtgaaggagtcagacggcgtggtcaacgatgagctgccaaactgctgggagtgt
ccaaagtgcaaccatgctgggaaaaccgggaaagcgtacaagcaaaagcgcggtcctggt
ttcaagtatgcctcgaacctgccgggctcgctgctcaaggagcagaagatgaaccgggac
aacaaagaggggctcgatccggccaaacggaaaggagagtgtgaagaggcggtgcatcgc
aagtcggaagagcatgtcaagaagccgccgacggacagcatcctgcgcaggaagtctgat
gaggtgcacctcaggaggaaacggaaatttgagaagccccaggagctgaccacgcgcaag
cggctaaaactcggcaaggaggagaagcttttcaggaaaaagcggcggtcctggaaggcc
acggaggacagggcggctctggccaacaaacccctccggcgctttaagcaggagccagaa
gaggacctgcccgaggcccccccgaagagcaaggagagcgaccagtcccgttccagctcc
cccacggccgggcccagcacagagggcgccgagggccccgacaagaagaagctcaagatc
cgacggaaacggcggctcccgaacaaggagctcagcaaggagctgagcaaggagctcaac
caggagatccagaagacggaaaacagcctggccaacgagaaccaccagcccatcaagtcg
gagccggagagcgagaacgaggagcccaagcgggccctgagcagcagtgagcggctgcac
cgcttcagcaagggcctcaatgggaccccccgggagctccggcaccagctggttcccagc
ctgcggaccactccccgagtcatcgcccggccccctccctccctctcgccccccaagtgc
atccagatggagcgccacgtcatccggccgccccccatcagtcccccgcccgactcgttg
cccctggatgacggggcggcccacgtcatgcagcgggaagtgtggatggccgtcttcagc
tacctcagccacagcgacctgtgcgtctgcatgcgggtctgcaagacctggaaccgctgg
tgctgtgataagcggttgtggaccaaaattgacttgaaccattgcaaatccatcaccccg
ctaatgctcagtggcattatccgccggcagcccgtcactctggacctcagctggacaaac
atctccaaaaagcaactgagttggctcatcaataggcttccaggactgcgggacttgctg
ctgtctggctgctcgtggatcgccgtgtcagcgttgtgcagttccagctgtcctctgctg
aggaccttggacgtccagtgggtggaaggactaaaggatgcccagatgcgggatctcctg
tctccaccgacggacaaccggccaggtcagatcgacaatcgtagtaaactccggaaccta
gcggagctgcgcctggccgggctggacatcacggacgcatccctgcggctcatcatccgg
cacatgcccctcctttccaggctcaacctcagttactgtaaccacgtcaccgatcagtcc
atcaacctgctgaccgccgtggggaccactactcgcgattccttaatggaaattaattta
gcagattgcaataaggttactgaccagtgcctgtccttctttaaacgttgtggaaatatc
tgccagatcgacctaaggtactgcaagcaggtaaccaaggagggctgtgagcagttcata
gcggagatgtcagtgagcgttcagtttgggcaagtggaagaaaaactcctgcaaaaactg
agttag
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integrated database retrieval system
