Ornithorhynchus anatinus (platypus): 100079932
Help
Entry
100079932 CDS
T01045
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04015
Rap1 signaling pathway
oaa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100079932 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100079932 (RAPGEF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
PDZ
RA
cNMP_binding
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
100079932
NCBI-ProteinID:
XP_028906099
Ensembl:
ENSOANG00000006961
LinkDB
All DBs
Position
X1:41964883..42251932
Genome browser
AA seq
1661 aa
AA seq
DB search
MTSPLDPGTKEALRKKPPERTQEDLNIIYSYLHGMEILSHLREHQLRLISSRARYERYNT
NQVLFCSETIARGWYILLSGSVLMKDSMRLPPCSFGKQSGGKRGCKCLVLEPSEIIVVEN
AKDNEENILQREIPARQSRRRFRKINHKGERQTITDNVDANSYLSLPADLTKMHLSDNPH
PQVTHVPSSQSGCSIASDSGSSSLSDIYQATESEMGDMDLTGLPEAPVDSEDEEEEDEEI
DRTSDPLLGRDVVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFE
VVEQAGATILEHGQELDSWYVILNGTVEISHPDGKSESLCMGNSFGIIPSLDKQYMNGVV
RTKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVQEHRELDRSGTRKGHIVIKA
TPERLIMHLIEEHSIVDPTYIEDFLLTYRTFLTSPLEVGDKLLEWFKLDSLRDKVTRVVL
LWVNNHFNDFEGDPAMTHFLEEFEKHLEDTKMKGHLRLLNIACAAKAKWRQIILQKPSRE
SPLLFSLNGGSEKGFGIFVEGVDAGSKAADAGLKRGDQIMEVNGQNFENITFTKALEILR
NNTHLSLTVKTNIFVFKELLSRTGLEKNGVPHIPKIAEKKSNRYSIPDMSGEMEQMFPRE
KGNKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGSVSQSQDDSIVGTRQCRHSLAI
MPIPGTLSSSSPDLLQPTTSMLDFSNPSAVGFYYIPDQVIRVFKADQQSCYIIISKDTTA
KEVVCHSVHEFSLTGAPENYSLCEVSVSPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNN
METETLCSDEDAQELLRESHISLLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLYKLDS
KTGNAHLKEFEDIINQETFWVATEILAEPNQLKRMKIVKHFIKIALHCRECKNFNSMFAV
ISGLNLAPVARLRGTWEKLPSKYEKHFRDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLF
PVVKKDITFLHEGNDSKVDGLVNFEKLRMIAKEIRQVIRMTSANMDPAVMFRQRKKRWRS
LGSLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSNLNVETDEE
RFQIMSLQCEPAYSTLTKNLSERRSAKSSEMSPVPLRSVGQTTKVHLHQQNRMSQVLQVP
AVNLYPIRKKGQGKDHITFSTSSQKLQGTSEEVINKKPAEDTISVASSLHSSPPASPQGS
PRKVGNVRSDNGSQMNLSGLSSPLTSDTNFKNSGQRSYGIGFALIPSAKSDNFSDSSHSE
ISSRSSIVSNCSVDSMSAALQDERGFPHAPSAPDPSGSMERKDYPPAAVDCGHHGPGWSL
SRPPTLRGLAVVPSMSNEEISHEHITIEAADSGRGSWTSCSSSSHDNFQNLQNQKSWDLL
NAYRQTHLDGPIAEVEPSNCCTEDPHLSPGGSSRTNRQPRDREVLDQSRQSWASSSSLSD
TYETNYGTIKRKTLENSVERPEGLDSKSGTETIYKTVTSSTEKGLIVYCVTSPKKDDRYR
EPPPTPPGYMGISLADIKEGPPHHPHLKPPDYSVAVQRSKMVHSDLSRLSSASLGSEPVT
CGPSKILTQPQWHYLQPPHPKVADLPAADSEADDDEQVSAV
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgacctctccattggaccccggcactaaagaggctttgaggaaaaagccccccgagagg
acccaagaggacttaaatattatttattcgtatcttcatggaatggagatattatcacat
ctcagggaacaccagctaagattaatatcttcaagagcccgatatgaaagatacaatacc
aatcaagttcttttttgctctgaaacaattgcccggggttggtatattcttctctctgga
tctgtgcttatgaaggactccatgcgtcttcctccttgcagttttggaaagcagtctgga
ggaaaaagaggatgcaaatgtcttgtattagaaccatcggaaattattgtggtagagaat
gccaaagataatgaagagaacatcctgcagagagaaattcccgctagacaatctcgtcgg
agatttaggaaaattaaccacaagggagaacgccagaccatcacggataatgttgatgct
aatagctacctttcgcttccagcagaccttaccaagatgcacctgtcagacaatcctcat
ccacaggtgacccatgtcccttctagtcaatccggatgcagcattgctagtgactctgga
agcagcagtttgtctgatatctaccaggcaaccgaaagcgagatgggagatatggatttg
acaggtcttccggaagcccctgttgattctgaggatgaagaggaggaagatgaggagatt
gaccgaacttcagatccactattgggtcgagatgtcgttcgagaatgccttgaaaaagaa
cctgcagacaaaaccgatgatgacattgaacaattactagaatttatgcaccaactcccc
gcctttgcaaatatgaccatgtctgtaagacgagagctgtgctcagtgatgatctttgaa
gtggtcgagcaagccggagccaccatcctggaacatgggcaagaacttgattcttggtac
gtgattttaaatggcactgtagagatcagtcacccagatggaaaaagtgaaagtctttgc
atgggaaatagctttggaattattccttccttggataagcagtatatgaatggagtcgtt
agaaccaaagtagatgattgtcagtttgtatgcatagcccagcaggactactggagaatc
ctaaaccatgtggaaaaaaacacccataaagtagaggaagaaggtgaaattgttatggta
caggagcacagagagctagatcgcagtggaaccagaaaagggcacatagtcattaaggca
acaccagaacggctcatcatgcacttaatagaagaacattctatcgtggatccaacttac
atagaagatttcttgttgacatacaggacgtttctcacaagtcccttggaagttggggac
aaactcctggagtggtttaaacttgacagtttaagggacaaggttactcgggtagtgttg
ttgtgggtcaacaatcatttcaatgatttcgaaggagatccagcaatgactcattttctg
gaggaatttgaaaaacatctggaagatacaaaaatgaaggggcacctccggttgttaaac
atcgcctgtgctgcaaaggcgaagtggaggcagattatcttgcagaagccttccagggaa
tcaccactccttttcagcctgaatgggggcagtgagaaggggtttgggatttttgtggaa
ggagtagatgcaggcagcaaagctgcagatgctggactgaaacggggtgatcagataatg
gaagtaaatggacaaaactttgaaaatatcacatttacaaaagcccttgaaatactgagg
aataatactcatctctctcttacagtaaaaaccaacatttttgtgttcaaagaacttctt
agtaggacaggactagagaaaaatggtgttccccatattcccaaaattgctgaaaagaaa
agtaatcgctactcaatcccggatatgtctggcgagatggaacagatgtttccacgggaa
aaaggaaacaagaaaattaaagcaaacactgtatcaggaggaagaaacaaaatcaggaaa
attttggacaagacacgatttagcatcctgcctccaaagctgtttagcgatggtagcgtg
agtcagtcacaagatgacagcattgttggaacgagacaatgtaggcacagtctagctata
atgcctattcctggaactctctcgtcaagcagccctgatctcctgcagcccaccaccagc
atgttggatttctccaacccatcagctgttggtttttactacattccggatcaagttata
agagttttcaaagcagatcaacaaagctgctatattatcattagtaaggacactactgcc
aaagaggtcgtttgtcattcggtgcatgaattcagtttgactggagcccctgagaattat
tctctctgtgaagtttctgttagtcctgaaggagtcataaagcagagaagacttccagac
caattttccaaattagcagatagaattcaactgaatggaaggtattatctcaaaaataac
atggaaacagagaccttatgctcagatgaggacgcacaagagttacttagagaaagccat
atctcccttttgcagcttagcaccattgaagtagcaacccagctatcaatgagagacttt
gatttatttcgcaacattgaacctactgaatacattgatgacctttataagttggactcc
aaaacaggaaacgctcacttgaaagaatttgaggacataattaaccaagaaacattttgg
gtggccacagaaattttggccgaacccaatcagctcaaaaggatgaagatcgttaagcat
tttatcaagattgcccttcactgtcgagagtgcaagaatttcaattccatgtttgcagtc
ataagtggcttgaatttggcacccgttgcacgactcagaggaacctgggaaaagttacca
agcaaatatgaaaaacacttcagagaccttcaagatctttttgatccatctagaaacatg
gccaagtaccgaaatattcttagtagtcaaagcatgcaacctcccattattccgctcttc
ccagttgtcaagaaggatatcacatttttacatgaaggaaacgattcaaaagtggacggt
ttagtaaactttgagaaactcagaatgattgccaaggaaatccgtcaagttatccgtatg
acctccgctaatatggaccctgctgtaatgtttcggcaaaggaagaagaggtggaggagt
ttggggtccctgagccagggcagcaccaattcaaacatgcttgatgttcagggaggggct
cacaaaaaacgcgctcgccgcagttccttgctcaatgccaagaagctttacgaggatgcc
caaatggccaggaaggtgaaacaatacctctccaatctgaacgtggagaccgacgaggaa
aggtttcagataatgtcgttacagtgtgagcctgcatatagcactttgaccaagaattta
agtgagagaagatcagcaaaatcatcagaaatgtctccagtgcccctgaggtcagttggc
caaaccacaaaagtccatctgcatcaacaaaacagaatgagccaagtgctgcaagttcca
gctgttaatttataccccatccggaaaaaaggtcaagggaaagaccacattacatttagc
accagttcccaaaagcttcaaggaacttctgaagaagtgatcaacaaaaaaccggccgaa
gacacgatatcagtggcatcatctttgcattctagtcctcctgcctcccctcaaggctct
ccccgcaaagtgggcaatgtcagatctgataatggcagccagatgaacctttcggggttg
tcttctccgcttactagtgataccaacttcaagaacagtggacagcgcagctacggaata
ggcttcgccctgataccgtccgccaagtcggataacttctccgactcgagccacagcgag
atttcctccaggtccagcatcgtgagtaactgctctgtcgactccatgtctgcggccctg
caggatgagcggggctttcctcatgctcccagtgccccagacccatcgggcagcatggag
aggaaagactatccaccagcggcagtggactgtggccaccacggccctgggtggtccctc
tctaggcctcccacactgcgaggcttggctgttgtgccttccatgagcaacgaagagatt
tcccatgaacacatcaccatagaagccgccgacagtgggcggggaagctggacttcgtgc
tccagtagctctcatgacaacttccagaaccttcagaaccagaagagctgggatctctta
aacgcctatcgtcagacgcacttagatggccccatcgccgaggtggaaccctccaactgt
tgcactgaagatccccatctgtctcccggaggctcttcccgaacgaaccggcagcccaga
gacagggaggtgctcgatcagtcccggcagagctgggcatcctcaagctccctgtcggac
acgtacgagacaaattacgggacgattaaacggaagacgttggagaactcggtggagcgg
ccggaaggtctggactctaaatcggggactgagaccatttataaaaccgttacttcaagc
acagaaaaaggcttgatagtgtactgtgtcacctcacctaagaaggacgataggtatagg
gagccacctcccacccctccgggatacatggggatctctttagcggacataaaggaagga
ccgccccaccacccgcacttaaaacctccagactatagcgtggcagtgcagaggtcaaag
atggtacatagcgacctctctagactctcatcagcttctctcggtagcgaacccgtgacc
tgtgggccatcgaagatcctaactcagcctcagtggcattacctgcaaccgccccatcct
aaagtagcagatctgcctgctgcagatagtgaagcagacgatgacgagcaagtttcggcc
gtgtaa
DBGET
integrated database retrieval system