Ornithorhynchus anatinus (platypus): 100080064
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Entry
100080064 CDS
T01045
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa02010
ABC transporters
oaa04146
Peroxisome
oaa04977
Vitamin digestion and absorption
oaa04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100080064 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100080064 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
100080064 (ABCD4)
04980 Cobalamin transport and metabolism
100080064 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oaa04131
]
100080064 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oaa02000
]
100080064 (ABCD4)
Enzymes [BR:
oaa01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
100080064 (ABCD4)
Membrane trafficking [BR:
oaa04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
100080064 (ABCD4)
Transporters [BR:
oaa02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
100080064 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
IRK
ArsP_1
SbmA_BacA
AAA_7
PIF1
ATP-synt_ab
AAA_29
T2SSE
Motif
Other DBs
NCBI-GeneID:
100080064
NCBI-ProteinID:
XP_028920301
Ensembl:
ENSOANG00000045221
LinkDB
All DBs
Position
1:complement(38036719..38058017)
Genome browser
AA seq
560 aa
AA seq
DB search
MTPRGAPRAGARPRLDLRFLRRFWTIQTILFPSWSSRNSLMFLTLLGVALWLKSLDQFIC
NLLYVSWRKVLTEHLHRHYFLGRVYYTLNVLRDDIDNPDQRISQDVERFCRQLSSISSRL
LISPFTLVYYTYQCFRSTGWLGPGSIFAYFVVGTLVNRVLMGPIVAKLVQQEKLEGDFRF
KHVQLRVNAEPAAFYRAGYVEHARTDRRLQRLLRTQKELMTRELWLYIGINTFEYLGSIL
SYVVIAIPIFSGVYGDLSPADLSALVSKNAFVSIYLIGCFSQLIDLSTTLSDVAGYTHRI
GELRETLAELAPQSQDLESDRNDWNSDKAPGEQTGPADAAFLLDRISVSAPSSDAPLIRD
LSLTVSRGQSLFITGNTGTGKTSLLRVLGGLWETARGSVRMLTCFGPHGVLFLPQRPFFT
DGTLREQVIYPLKEIYPASGSVDDERILRFLELAGVAGLATRTGGLDAQVDWNWYDVLSP
GEMQRLSFARLFYLQPRYAVLDEATSALTEEAESELYRICQQLGMTLISVGHRRSLEKFH
SSILNLCGDGRWELRRVKKE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgactcctcggggggcgccgcgcgccggggctcggccccggctggacctgcgtttcctc
cgaaggttctggaccatccagacgatcctctttccctcctggtcatcccggaattccctg
atgttcctgactctccttggcgtggcactttggctgaagagcctcgaccagtttatctgt
aacctgctgtacgtcagctggaggaaggttctcacggagcatttacaccgccactacttt
ctgggccgggtgtactacacgctcaacgtgctgcgagatgacatcgacaacccggaccag
cgcatcagccaggacgtggagaggttctgccgccagctcagctccatctccagcaggctg
ctcatctcgcccttcacgctcgtctactacacctaccagtgcttccgcagcacgggctgg
ctggggcccgggagcatcttcgcctacttcgtcgtggggacgctggtgaaccgagtcttg
atgggccccatcgtggcgaagctggtgcagcaggagaagctggagggagacttcagattc
aagcacgtgcaacttcgggtgaatgccgagccagcggccttttatagagctggctacgtg
gagcacgcgcggacggaccgccggctgcagagactcctgcggacgcagaaggaattgatg
acccgagagctgtggctgtacattggcatcaacaccttcgaatacctgggcagcatcctg
agttacgtggtgatcgccatccccatcttcagtggcgtctacggcgacctgagccccgcg
gacctcagtgccctcgtcagcaagaatgccttcgtgtccatttacctcatcggctgcttc
tcccagctcatcgacctctccaccaccctctccgacgtggccggctacactcaccggatc
ggagagctgcgggaaacgttagcggagttggccccgcaatcccaagatttggagtccgac
cggaacgactggaactctgacaaggctccgggggagcagacggggccggcggacgccgcc
ttcctcctggaccggatctccgtctcggcgccttcctcggacgcgccgctgatccgagac
ctgagcctgaccgtctcccggggccagagcctcttcatcacgggcaacacgggcaccggc
aagacctccctgctcagggtcctggggggcctctgggagaccgcccggggcagcgtgcgg
atgctgacgtgtttcggaccccacggggtgctcttcctgccgcagagacccttcttcacg
gacgggacgctgcgggagcaggtgatttatccgctgaaggagatatacccggcttcaggg
tccgtggacgacgagaggattctgagattcctggagctggcaggggtggccggcttggcg
accaggaccgggggactggatgcacaggtggactggaattggtacgacgtcctgtccccg
ggggagatgcagagactctccttcgcccggctcttctatctccaaccccgatacgcagtc
ctggacgaggccaccagcgcgctgacggaggaagcggagagcgagctgtatcggatctgc
cagcaactgggaatgacgctcatcagcgtgggccatcgccgcagcctggagaagtttcac
tcctcgatcctgaacctctgcggagacgggagatgggaattgaggcgcgtcaaaaaggaa
tga
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