KEGG   Ornithorhynchus anatinus (platypus): 100082104
Entry
100082104         CDS       T01045                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
oaa  Ornithorhynchus anatinus (platypus)
Pathway
oaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100082104 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oaa03041]
    100082104 (SMNDC1)
Spliceosome [BR:oaa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100082104 (SMNDC1)
 Complex B
    100082104 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    100082104 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 100082104
NCBI-ProteinID: XP_028937064
Ensembl: ENSOANG00000001598
UniProt: F7F0X9
LinkDB
Position
16:31144449..31157923
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLTS
SDSSASAQPSHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagatctagcaaaacaacttgccagctacaaggctcaactccagcaagttgag
gctgcgttatctggcaatggagaaaatgaagacctactaaaattgaaaaaagatttacag
gaagttatagaattaaccaaagaccttctatcaacacaaccttccgagacccttacaagt
tcggacagttctgcttctgcccagccctctcactcctggaaagtgggggataaatgtatg
gcagtctggagtgaagatggacagtgttatgaagcggaaattgaagagattgatgaagag
aatggtactgctgccatcacgtttgctggctatggcaatgccgaagtcaccccactgctg
aatctcaaacctgtggaggaaggaaggaaggccaaagaagatagtggcaacaagcccatg
tcaaaaaaagaaatgattgcccagcaacgagaatataaaaaaaagaaagcattgaaaaaa
gcccagagaatcaaagaacttgagcaggaaagagaagaccaaaaggtgaaatggcaacaa
ttcaacaatcgagcttattcaaaaaacaagaaaggacaggtcaagaggagtatttttgct
tcccccgagagtgtaactggcaaagttggcgtaggaacttgtggaattgccgataaaccc
atgacacagtatcaagatacctctaaatacaatgtcaggcatctaatgcctcagtaa

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