Ornithorhynchus anatinus (platypus): 100681912
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Entry
100681912 CDS
T01045
Symbol
SLIT1
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04360
Axon guidance
oaa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100681912 (SLIT1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100681912 (SLIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oaa00536
]
100681912 (SLIT1)
Glycosaminoglycan binding proteins [BR:
oaa00536
]
Heparan sulfate / Heparin
Axon guidance molecules
100681912 (SLIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
hEGF
LRRCT
LRR_1
EGF_TEN
LRR_9
LRR_14
EGF_Teneurin
EGF_DL_JAG
EGF_3
EGF_4
SPE9_EGF_3rd
LRR_NXF1-5
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100681912
NCBI-ProteinID:
XP_028916284
Ensembl:
ENSOANG00000041489
LinkDB
All DBs
Position
3:124989037..125221505
Genome browser
AA seq
1551 aa
AA seq
DB search
MGVKRPFGGLRAALWVLAWQAAFPPEARGCPALCTCTGTTVDCHGTGLRAVPKNIPRATE
RLELNGNNITRISKNDFAGLKQLRVLQLMENQIGVIERGAFDDMKELERLRLNRNQLHVL
PELLFQNNQALSRLDLSENAIQAVPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLE
VLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLSWLSQWLRQRPTIGLFTQCAG
PAALRSLNVAEVQKNEFSCSGQGDASRASICTLSSGSCPAMCTCSNGIVDCRGKGLTAIP
ANLPETMTEIRLELNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLNSLVL
YGNKITDLPRGVFGGLFTLQLLLLNANKINCIRADAFQDLQNLSLLSLYDNKIQSLAKGT
FTSLRAIQTLHLAQNPFICDCHLKWLADFLRTNPIETSGARCASPRRLANKRIGQIKSKK
FRCSAKEQYFIPGTEDYQLNSECHSDVICPNKCRCESNVVECSNLKLTKIPERIPQSTAE
LRLNNNEISVLEATGIFKKLPHLKKINLSNNKVAEIEDGAFEGAASVSELHLTVNQLDSV
RSGMFRGLEGLRTLMLRNNRIGCIHNDSFTGLRNVRLLSLYDNQISTISPGAFDTLQSLS
TLNLLANPFNCNCQLAWLGDWLRRRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCEEGQE
EVGCVPRPQCPQECTCLDTVVRCSNKHLRALPVGIPKNVTELYLDGNQFTLVPGQLSTFK
YLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNSLQCIPPLAFEGLRSLRLLSLHGNDI
STLPEGIFTDVTSLSHLAIGANPLYCNCHLRWLSSWVKTGYKEPGIARCAGPPEMEGKLL
LTTPAKKFECQGPPTLAVQAKCNPCLSEPCRNQGVCQDDPFEFYRCTCPSGYKGKDCEIS
LSSCSSSPCENSGTCQALEGEGARFTCACAKGFEGPTCGVNVDDCQGHNCENGGLCVDGV
GNSTCLCPPPYTGEACERLMDFCSPEQNPCQHGASCVSTAEGPKCECAPGYVGDNCSVDY
DDCSDHRCQNQAQCVDEVNGYSCLCPEGYSGQLCEMPPRAGAPLSPCERADCQNGADCAM
LGSRPVCRCRPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGILL
YNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNLSIDG
GSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGSSFHGCIRNLYINNELQ
DFTKTQMKPGVVPGCEPCRKLYCLHGICQPNAAPGPVCHCQPGWGGPHCDQPTGDPCQGH
KCAHGTCTALDALSYSCRCQDGYRGALCNQPGTQPETQQATQQGTQQGTQQGTPSEPCAA
LRCLHGRCQVSADGAARCACDSGFTGDLCEQESECRGDPVRDYHQVQRGYAICQSSRPLS
WVECRGPCVGQGCRCSGLRPKRRKVTFQCSDGSSFVDQVEKPTECGCAHCM
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgaagcggcccttcggggggctccgggccgccctgtgggtcctggcctggcag
gccgccttccccccggaggcccgaggatgcccggccctctgcacctgcacggggaccacc
gtggactgccacggcaccggcctcagggccgtgcccaaaaacatcccccgcgccaccgag
aggctagagctcaatgggaacaacatcacccggatcagcaagaacgactttgcgggcctg
aaacagcttcgggtgctgcagctgatggaaaaccagattggagtcatagagcgaggagca
tttgatgacatgaaagagctggaaagacttcgactgaaccggaaccagctgcatgtgttg
ccagagctgctgttccagaacaaccaggccctctcaaggctggacctcagtgagaacgcg
atccaggctgtgcccaggaaagccttccgaggagccactgacctgaaaaacctacagttg
gacaagaaccagatcagctgcatcgaggacggggccttccgagccctccggggcctggag
gtgttgactttgaacaacaacaacatcaccaccattccagtgtccagcttcaaccacatg
cccaaactgcgcaccttccgcctgcactccaaccatctcttctgcgactgccacctctcc
tggctgtctcagtggctgcgtcagcgcccaaccatcgggctgttcacccagtgcgcgggg
cctgccgctctccgcagcctcaacgtggccgaggtccagaagaacgagttcagctgctca
ggccagggagatgcgtcccgagcatccatctgcaccctgtcctcgggctcctgccctgcc
atgtgcacctgcagcaatggcatcgtggactgtcgtggcaaggggctcactgccatccct
gccaacctgccggagaccatgacagagatacgtctggaactcaatgggatcaagtccatc
cctcctggagccttctcgccctataaaaaactgcgaaggatagacctgagcaacaaccag
atctcagagatcgcacctgacgccttccagggccttcgttccttaaactcactggtgctg
tatggaaacaagatcacagacctgcccagaggggtcttcgggggcctcttcaccttgcaa
ctgctgctgctgaacgccaacaagatcaactgcatccgggccgacgccttccaggacctc
cagaacctgtccctgctctccctgtatgacaacaagatccagagcctggccaagggcacc
ttcacctccctgcgggccatccagaccctacacctggctcaaaacccattcatctgtgac
tgtcacctcaagtggctggcggactttctgcggaccaaccccatcgagaccagcggggcc
cgctgtgccagtccccgacgcctcgccaacaagcgcatcgggcagatcaagagcaagaag
ttccggtgctcagcaaaggagcagtactttattccaggtacggaggattaccagctgaac
agcgagtgtcacagtgatgtgatctgccccaacaagtgtcgctgcgagtccaacgtggtg
gagtgctccaacctgaagctgaccaagatccccgagaggatcccgcagtctacggccgag
ctacgattgaacaacaatgaaatttcagtcctggaggccactgggatcttcaaaaagctt
cctcacctgaagaaaattaacctgagcaacaacaaggtggccgagatagaagatggcgcg
ttcgagggggcggcctcggtcagcgagctgcatctgactgtcaaccagctggactctgtc
cgcagcggcatgttccgggggctggagggcctgaggaccctgatgctgaggaacaaccgc
atcggctgcatccacaacgacagcttcaccggcctgcgcaacgtccgcctcctctcgctc
tacgacaaccagatcagcaccatctccccgggggccttcgacacccttcagtccctctct
accctgaacctgttggccaatcccttcaactgcaactgccagctggcctggctcggggac
tggctgcgcaggaggaagatcgtgaccgggaacccgcgctgccagaacccggacttcctg
cgccagatccccctgcaggacgtggccttcccagacttcaggtgtgaggaagggcaggaa
gaggtgggctgcgtcccacgcccccagtgcccccaggaatgcacctgcctggacacggtc
gtccgctgcagcaacaagcacctccgcgccctgcccgtgggcatccccaagaacgtcacg
gaactctatttggacggaaatcagttcacattagtcccaggacagctctccaccttcaaa
tacctgcaactggtggacttgagtaacaacaagatcagttctttaagcaattcttccttc
accaacatgagccagctcaccaccctgatcctcagctacaattccctgcagtgcatccct
cccctggcctttgaggggctccgctccctccgccttctgtccctccacggcaacgatatc
tccactcttcccgagggcatcttcaccgacgtcacctctctctcccacctagccatcggg
gctaaccccctctactgcaactgccatctgcgttggctgtccagctgggtcaagaccggc
tacaaggagcctgggatcgcccgctgtgccggtcccccagaaatggagggcaagctgctc
ctcaccactcccgccaagaagtttgaatgccaagggcctcccacattggctgtgcaagcc
aagtgcaacccctgcctgtccgagccgtgccgaaaccagggggtctgccaggatgacccc
ttcgagttctacaggtgcacctgtcccagtggctacaagggcaaagactgcgagatctcc
ctgagcagctgctccagcagcccctgcgagaacagcgggacgtgccaagccctggaggga
gagggagccagattcacgtgtgcctgtgccaaggggttcgaggggccaacctgtggggtg
aacgtggacgactgccaaggtcacaactgtgagaacggcggcctgtgcgtggacggagtc
gggaactccacctgcctgtgccccccgccctacacaggagaggcctgtgagaggctgatg
gatttctgttccccagagcaaaatccctgccagcatggggccagctgcgtgagcacggct
gaggggcccaagtgcgagtgtgccccaggctacgtgggagacaactgcagtgtggactat
gacgactgctcagaccatcgctgccagaaccaagcccagtgcgtggacgaagtcaatggc
tactcttgtctgtgcccggaaggctacagcgggcagctgtgtgagatgcctccccgggcc
ggggcgcccttgagcccctgcgagcgggccgactgccagaacggagccgactgcgccatg
ctggggagccggcccgtgtgccggtgccggcccggtttcggcgggcccgagtgcgagaag
ttgctgagcgtcaactttgtggatcgggacacctaccttcagttcacggacctgcagaac
tggccgcgggccaacatcacgctgcaggtgtccacggcggaagacaacgggatcctgctt
tacaacggcgacaacgaccacatcgcagtggagttgtaccagggccacgtgcgggtcagc
tacgatcctggcagctaccccagctctgccatctacagtgccgagaccatcaacgatgga
caattccacacggtggagctggtcacctttgaccagatggtgaatctttccatcgatggc
ggcagccccatgaccatggacaactttggcaagcactacaccctcaacagcgaggccccg
ctctacgtgggggggatgcccgtcgacgtgaactcggcggccttccgcctgtggcagatc
ctgaacggctccagcttccacggctgcatccggaacctgtacatcaacaacgagctgcag
gacttcaccaagacgcagatgaagccgggcgtcgtgccgggctgcgagccctgccggaag
ctctactgtctccacggcatctgccagcccaacgccgcccccgggcccgtgtgccactgc
cagccggggtgggggggccctcactgcgaccagccgaccggagacccctgccaagggcac
aaatgtgcccacgggacctgcacagccctggacgcgctgtcctacagctgccggtgccag
gacggctaccggggggcgctgtgcaaccagccggggacgcagccggagacgcagcaggcg
acgcagcaggggacgcagcaggggacgcagcaggggacgccctccgagccctgcgcagcc
ttgcggtgcctgcatgggcgctgccaggtctccgccgatggggccgcgcgctgcgcgtgc
gacagtggctttaccggggacctgtgtgagcaagagtccgagtgccggggggaccccgtc
cgggactaccaccaggtccagaggggctatgccatctgccagagcagccgcccgctgtcg
tgggtggagtgtcggggcccttgcgtgggccagggctgccgctgctcgggtctgcggccg
aagcggaggaaggtcacgttccagtgcagcgacggctcctccttcgtggaccaggtggag
aagcccaccgagtgcggctgcgctcactgcatgtag
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