Brucella anthropi OAB: DR92_1238
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Entry
DR92_1238 CDS
T03251
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
oah
Brucella anthropi OAB
Pathway
oah03030
DNA replication
oah03410
Base excision repair
oah03420
Nucleotide excision repair
oah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DR92_1238 (ligA)
03410 Base excision repair
DR92_1238 (ligA)
03420 Nucleotide excision repair
DR92_1238 (ligA)
03430 Mismatch repair
DR92_1238 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oah03032
]
DR92_1238 (ligA)
03400 DNA repair and recombination proteins [BR:
oah03400
]
DR92_1238 (ligA)
Enzymes [BR:
oah01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
DR92_1238 (ligA)
DNA replication proteins [BR:
oah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DR92_1238 (ligA)
DNA repair and recombination proteins [BR:
oah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
DR92_1238 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DR92_1238 (ligA)
MMR (mismatch excision repair)
DNA ligase
DR92_1238 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DR92_1238 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
HHH
Zn_ribbon_PADR1
TubC_N
DZR_2
Motif
Other DBs
NCBI-ProteinID:
AIK44361
LinkDB
All DBs
Position
1:1304335..1306500
Genome browser
AA seq
721 aa
AA seq
DB search
MTDTPVEKLTEPEAVSELERLAREIAHHDELYHANDRPEISDAEYDALKRRNDAIEARFP
HLVRTDSPSLRVGTAPVSKFAQVVHARPMLSLGNAFSDDDVRDFVGSVYRFLGPLPDNSI
AFTAEPKIDGLSMSIRYENGILISGATRGDGTTGENVTTNIRTIAEIPNRLPAGAPSVVE
VRGEVYMAKSDFLALNEQMAAEGKQTYVNPRNTAAGSLRQLDAKVTASRKLKFFAYAWGE
MSDMPADTQMGMVEIFREWGFPVNPLTKRLHGADELLAHYRAIGLERAQLDYDIDGVVYK
VDRLDLQTRLGFRSRSPRWAIAHKFPAEQATTILRGIDIQVGRTGALTPVARLEPITVGG
VVVTNATLHNEDYIKGIGLKGERIRADEHDIRVGDTVIVQRAGDVIPQIVDVVLEKRKAD
ATPFVFPHECPVCHSHAVREEGEAVYRCTGGLTCAAQAVERIRHFVSRNAFDIEGLGEKQ
VEFFFHAEDDKLKIKSPADIFTLQQRQAESPLKKLENIEGFGATSVKKLYDAINDRREIA
LHRFLFGLGIRHVGEVNAKRFARAYLSYAAFEEAALEAVPPKEGDRTDKGNEAWQELIAV
EGIGSIVAEAVVDFYAEPHNREVLDNLFKAGVTPVDEVALVSTGSPVEGKTVVFTGSLER
MSRDEAKAMAERYGAKTAGSVSKKTDLVVAGPGAGSKLAKASELGIEVIDEDAWFTLVGE
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatactcccgtcgaaaaactgaccgaacctgaagccgtttcagaactggaacgt
ctggcgcgcgaaattgcgcatcatgatgagctctatcacgccaatgaccggccagagatt
tccgatgccgagtatgacgcgctaaagcggcgtaacgatgcgattgaagcgcgcttcccg
catctggtgcggacagacagcccgtccttgcgtgttggtacagcacctgtttccaaattt
gcgcaggttgttcatgcacgcccgatgctttcgctcggcaatgcgttttcagacgatgac
gtccgcgatttcgtgggcagtgtctatcgcttcctggggccgctgccggataattccatt
gcatttaccgctgaaccgaagatcgatgggctttccatgtcgatccgttacgagaatgga
attctgattagcggcgcgacgcgcggtgacggcacaaccggcgagaatgtcacgacgaat
atccgcaccattgccgaaattccgaaccggcttccggctggagcgccttccgtcgttgaa
gtacgcggtgaggtctatatggccaaaagtgacttcctcgcgctcaacgaacagatggcc
gctgaaggcaagcagacttatgtgaacccgcgcaacacggcagcaggttccctgcgccag
ctcgatgccaaggtgacggcgagccgcaaactgaaattctttgcctatgcctggggcgaa
atgtcggacatgcctgccgatacgcagatgggcatggtcgagattttccgcgaatggggt
ttcccggtcaatccgctgacgaagcggcttcacggtgcagacgaattgctcgcgcattac
cgcgccatcggtcttgagcgcgctcagctcgactacgacattgacggtgtcgtctataag
gttgatcggctcgatctgcagacgcggctcggtttccgctcgcgcagcccacgatgggcc
attgcgcacaagtttccggcagaacaggctacgacgatcttgcgcggcatcgacattcag
gtcgggcgcaccggcgcgctgacgccagtggcgcggctggagccaatcaccgtcggtggt
gtggtcgtcaccaatgcgacgctgcacaacgaggactatatcaagggtatcggactcaag
ggtgagcgtattcgtgctgatgagcatgatattcgcgtcggcgatacggtcatcgtgcag
cgcgcaggcgatgtgatcccacagattgtcgatgtcgtgttggagaagcgcaaagccgat
gcaacgccgtttgtgttcccgcatgaatgcccggtctgtcacagtcatgccgtgcgcgaa
gagggcgaggcggtctatcgctgcaccggcggcctgacctgtgctgcgcaggcggtcgag
cgcattcgtcatttcgtatcgcgcaatgcgttcgatattgaaggccttggcgaaaagcag
gtcgaattcttcttccatgccgaagatgacaaactgaagatcaaatcgcctgcggatatc
ttcacgctgcaacagcgacaggctgaatcgcctctcaagaaactggagaacattgaaggt
ttcggcgcgacttccgtgaagaagctttatgatgcgatcaatgatcggcgcgagattgcc
ctgcatcgctttctgttcggccttggtatccgtcatgttggtgaggtgaatgccaagcgc
tttgcgcgcgcctatctgtcttatgctgcctttgaagaagctgctctggaagcagttccg
ccaaaagagggtgaccgcaccgacaagggcaatgaagcctggcaggaactgattgccgtt
gagggcatcggttccatcgttgctgaagctgtcgtggatttttatgcggagccgcataat
cgcgaagtattggacaacttgttcaaagcaggagtgactcctgtagacgaagttgcactc
gtatcgaccggttcgccggtcgaaggcaagacggtggtatttaccggcagtctggaacgt
atgtcgcgcgatgaggcaaaggccatggctgagcgctacggagcaaagacggctggatcg
gtttcgaaaaagaccgatcttgtggtggccggaccgggggcgggttccaaactcgccaag
gcatccgagttgggaatcgaagtcattgatgaagacgcctggtttacactggtcggagaa
gaataa
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