Oxalobacter aliiformigenes: NB647_08685
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Entry
NB647_08685 CDS
T08749
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
oal
Oxalobacter aliiformigenes
Pathway
oal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NB647_08685 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oal03400
]
NB647_08685 (nth)
Enzymes [BR:
oal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NB647_08685 (nth)
DNA repair and recombination proteins [BR:
oal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NB647_08685 (nth)
Prokaryotic type
NB647_08685 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_8
ORC6_2nd
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WAV88941
LinkDB
All DBs
Position
1885967..1886608
Genome browser
AA seq
213 aa
AA seq
DB search
MIPEKVVQMFERFEKANPDPRSELQFKSPFELLVAVILSAQATDISVNKATEKLYPVANT
PEAIVQLGTEGLMPYVKTINLYPTKSRNIVRMSEILLEKHHGKVPDNREDLEALPGVGRK
TANVVLNTAFHQNAMAVDTHIFRVSNRTGLAPGKNVLEVEKRLVEVIPPKFMMNAHHWLL
LHGRYVCKAKAFQCSGCLISDLCEYPDKIPNAG
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgattccggaaaaagtagtccaaatgttcgaacgctttgaaaaagcgaatcccgatccc
cgttccgaattgcaattcaagtcaccttttgaactgttggttgccgttattctctcggca
caggcaacagatatttccgtcaacaaggcaacggaaaaattgtacccggtcgcgaacaca
cctgaagcgattgtacagctcggtacggaaggcctgatgccttatgtaaaaacaatcaat
ctttatccgaccaaatccagaaatattgtaagaatgtcggaaatattgctggaaaaacat
catggaaaagtaccagacaacagagaagatctggaagcacttcccggagttggccgcaaa
acggccaatgtcgtattgaacacggcatttcatcagaatgcgatggctgtcgatacccat
attttccgcgtatccaacagaaccggactggcgcccgggaaaaatgttctggaagtcgaa
aagcggctcgtcgaagtcattccgccaaaattcatgatgaatgcacatcactggctgttg
cttcatggtcgttatgtctgcaaggccaaggcatttcaatgttccggctgtctgatcagc
gatctttgcgaatatcctgacaaaataccaaacgccggttga
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