Ovis aries (sheep): 101117944
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Entry
101117944 CDS
T03117
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X2
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
oas
Ovis aries (sheep)
Pathway
oas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101117944 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
101117944 (SMG6)
03032 DNA replication proteins [BR:
oas03032
]
101117944 (SMG6)
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101117944 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
101117944 (SMG6)
DNA replication proteins [BR:
oas03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
101117944 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
MCD_N
Motif
Other DBs
NCBI-GeneID:
101117944
NCBI-ProteinID:
XP_012040860
UniProt:
W5Q0F2
LinkDB
All DBs
Position
11:complement(22970488..23171756)
Genome browser
AA seq
1380 aa
AA seq
DB search
MKEPRQRKDNRRPDLEIYKPGLSRLRNRPKIKEPSGSDELKNEVVNDRDSSAVGNCTQLM
KDVCKDNPQQNGPVDSENIRAQESFPGTVGQEDRSLRIIKRTKKPDMQIYQPGRRLQTVN
KEATSRVEEEEILNQVEQLRVEEDECRGNVKEEVLSKPDREEAEKSLSGDRARAAKGEKG
KRVEKGEGVKKAIEDSAPGKPGSAKRYSRSDKRRNRYRTCSTSSAGSNNSAEGAGLTDSG
SRRRRQDRTKERPRLKKQVSMSSTDSLDEDRIDEPDGPRRNSERKKHSERSWSGRGEGEQ
KSNGKENRGTLRVTFDAETMNKDSPVVRSAREEVDRLKPDKGSSGGGKGSEKQESKNLRQ
ELRGRGRGILILPAHTTLSVSSAGSPESTPLGPRLLFGTGSKGTRSWGRGGTTRRLWDPN
NPEQKPALKSQTPQLHFLDTDDEVSPTSWGDSRQAQASYYKFQNSDNPYYYPRAPGPASQ
YPYTGYSPLQYPVGPTNGVYPAPYYPGFPAPSGQYVCSPLPASTMSPEEVEQHVRNMQQQ
ELHRLLRVADNQELQLSNLLSRDRISPEGLEKMAQLRAELLQLYERCILLDIEFSDNQNV
DQILWKNAFYQVIEKFRQLLKDPNVENPEQIRNRLLELLDEGSDFFDSLLQKLQVTYKFK
LEDYMDGLAIRSKPLRKTVKYALISAQRCMICQGDIARYREQANDTANYGKARSWYLKAQ
HIAPKNGRPYNQLALLAVYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQ
MEKKQHEELELSPDQWRKGKKSTFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENG
LGSLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRM
LQLMTINMFAVHNSQLKDCFSEECRSVIQEQAAALGLAMFSLLVRRCTYLLKESAKAQLS
SPEGEEDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSQVAVDVWS
TLADFCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDK
VIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDTMGKEMGSQEGKQLEDEE
EDVVIEDFEEDSEAEGSGGEDDIRELRAKKLALARKIAEQQRRQEKIQAVLEDQSHVRQM
ELEIRPLFLVPDTNGFIDHLASLAQLLESRNYILVVPLIVINELDGLAKGQETDHRAGGY
ARVVQEKARKSIEFLERRFESRDSCLRALTSRGNELESIAFRSEDITGQLGNNDDLILSC
CLHYCKDKAKDFMPTNKEEPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPAFLTWAQVG
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcccaggcagcgaaaagataacaggcgcccagatctggaaatctataagcct
ggtctttcccggctaagaaacagacctaaaatcaaggaaccctctgggagtgacgaattg
aagaatgaagttgttaatgacagagattcttctgctgttggaaattgtacccagctcatg
aaagatgtctgcaaagacaacccacagcaaaatggtcctgtagactcagaaaatattcgg
gcacaggagtcctttcctgggactgttggacaagaggatcgaagcctaagaattattaag
aggacaaagaaaccagacatgcagatctatcagccaggaaggcgtttgcagactgttaac
aaagaagccaccagccgggtggaagaggaagaaatcctcaaccaggtagagcaactgagg
gtagaggaagatgagtgtaggggaaatgtgaaagaggaggtgctgagcaagccagacaga
gaggaggctgaaaagagcttaagtggtgacagagcaagggctgcaaagggagaaaaagga
aagagggtagaaaagggggagggggtgaagaaggcgatcgaagactcggccccgggcaag
ccgggttctgccaagcgttattcccgctcagacaaacgcaggaaccgctaccgcacttgc
agcaccagctcagccgggagcaacaacagcgccgagggggctggcctgactgacagtgga
agtcgccgccgccgccaggatcggaccaaggagaggcctcgactgaagaagcaggtgtct
atgtcctcaaccgactccttggatgaggacagaattgatgagcccgatggaccacggagg
aactcagagaggaagaaacattcagaaagaagctggtctggccgaggggagggagagcag
aaaagcaatggtaaagaaaatcgaggtactcttcgagtgactttcgatgcagaaaccatg
aacaaagattccccagtggtgaggtctgccagggaagaggtggataggttaaagccagac
aaaggctcgagcggtgggggcaaaggctctgagaagcaggagtccaaaaacctgagacag
gagcttcggggtcgcggccggggcattctcattctccctgcccacaccactctgtcggtc
agttcagccggttctccagagtcgacacctttgggacctcggcttttatttggaactggt
agcaagggaactcggagttggggccggggaggcaccactcgacgattgtgggacccaaac
aatcctgaacagaaacccgctctaaagagccagacgccgcagctacatttcttggacact
gatgatgaagtcagccctacctcttggggtgactcacgccaggcccaagcctcttactat
aagtttcagaactccgacaacccctattattacccccgggcaccaggccctgcctcccag
tatccttacacaggctacagccctctgcagtacccggtgggccctacaaacggtgtgtac
ccagcgccttactacccgggcttcccagctccatcaggacagtatgtgtgtagccctctc
cctgccagcaccatgagtcctgaggaggtggaacagcacgtgaggaacatgcagcaacag
gaactgcaccggctcctccgggtggctgacaaccaagaactgcaactcagcaacctgctc
tccagggaccgcatcagtcctgagggcctggagaagatggctcagctcagagctgaactg
ctgcagctatatgagcgctgtattctattagatattgagttctctgataatcagaatgtg
gatcagatcctgtggaagaatgctttctatcaggtgattgagaagttcaggcagcttctc
aaggatccgaatgttgagaacccagaacagattcggaacagacttttggagctcttggat
gagggtagtgacttctttgatagtttgcttcagaagctgcaggtcacttacaagttcaaa
ctggaggactacatggatggtcttgccattcgcagcaagccattacgaaagacagtaaaa
tatgccttgatcagtgcccagcgatgtatgatttgccaaggagatattgccaggtatcgg
gagcaagccaacgacacggcaaattatgggaaggcacgcagttggtacctgaaggcccag
catattgctccaaagaatgggcgcccttataaccagttggctctgctggctgtgtatacg
aggaggaagctggatgctgtctattattatatgcgcagtttagctgccagcaaccctatc
ctgactgccaaggagagtctcatgagcttgtttgaagagaccaaacggaaggcggaacag
atggaaaagaagcaacacgaagaactggagctgagccctgaccagtggcggaaagggaag
aaatccactttccggcatgtaggagacgacaccactcgcctggagatctggattcatcca
tcccatccccggtcctcccagggcaccgagtctgggaaggattctgagcaggagaatggg
ctgggcagcctgagccccagcgatctgaacaaaaggttcatcctcagttttctccatgcc
catgggaagctgtttacccggattgggatggagacgttccctgcagtggctgagaaggtc
ctcaaggagttccaggtgttgctgcagcacagcccctctcctattggaagtacccgcatg
ctacagcttatgaccatcaacatgtttgctgtacacaactcccagttgaaagactgcttc
tcggaggagtgtcgctctgtgatccaggagcaggctgcagccctgggcctggccatgttt
tctctcctggtgcgacgctgcacctacttactgaaggagtcagccaaagctcagctgtcc
tctcctgagggggaagaggatcaagatgacatcaaggtgtcctcctttgtcccggacctg
aaggaactgctccccagtgtgaaggtctggtcagactggatgctcggctacccagacacc
tggaaccctccgcccacctccctggacctgccctcacaggttgctgtggatgtgtggtcg
acgctggctgacttctgtaacatactgactgcggtgaatcagtctgaggtgccactgtac
aaggacccggacgatgacctcaccctcctcatcttggaagaggatcggcttctctcgggc
tttgtccccttgctggctgcccctcaggacccctgctacgtggagaaaacctcggataag
gttattgcagccgactgcaaaagggtcacagtgctgaagtattttctggaagccctttgt
ggacaagaagagcctctgctggcattcaagggtggaaaatatgtgtcagtggcacccgtc
ccagacaccatgggaaaggaaatgggaagccaagagggaaaacaactggaagatgaggag
gaggacgtggtgattgaagactttgaggaagactcggaggccgaaggcagcgggggcgag
gatgacatcagggaacttcgggccaagaagctggctctggccaggaagatagcggagcag
cagcgtcgccaggagaagatccaggctgtcctggaggaccagagtcacgtgaggcagatg
gagctcgagatcagacccttgttcctcgtaccagacaccaacggcttcattgaccacctg
gccagcctggcgcagctgctggaaagcaggaactacatcctggtggtgcccctcatcgtg
atcaatgagctggacggcctagccaaggggcaggagacagaccaccgggccgggggctat
gcccgcgtggtacaggaaaaggcccggaagtccattgagttcctcgagcggagattcgag
agtcgggactcttgcctgcgggccctgaccagccgtggcaatgaactcgaatccatcgcc
ttccgcagcgaggacatcactggccagctgggtaacaacgatgacctgatcctctcctgt
tgcctccactactgtaaagacaaggcgaaggacttcatgcccaccaacaaagaggagccc
atccggctgctgagggaggtggtgctgttgacggacgaccggaacctgcgtgtgaaggcg
ctgaccaggaacgtgcctgtgcgggacatcccagccttcctcacgtgggcccaggtgggc
tga
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