Oreochromis aureus (blue tilapia): 116313766
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Entry
116313766 CDS
T07295
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116313766 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116313766 (irf5)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116313766 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
116313766
NCBI-ProteinID:
XP_031587415
Ensembl:
ENSOABG00000000247
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All DBs
Position
LG17:23688743..23694400
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AA seq
474 aa
AA seq
DB search
MSVQPRRVRLKPWLLAQVNSGRYPGLQWLSADHRLFQIPWKHATRHTPVSDEENTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVQPYKIYEVCEHPGST
DGAEDDDEEMPNLMDLSINPRLGDSAPFASFPAPSEMNQFSLPPNGTFGPPHIPVPLLPD
ITMTSDLQGQAHFLHNGLQDLNAAAVQPEPDLMEASGMVGVQNQAEPQNHQPCKYDLLSS
VPLTDLDLKFQYRGRTVGSLTVSNPQGCRLYYGHLEPTPEQVDLFGPVNLQQVLFPGTSE
MQNEKQRFYTEALLDVMDRGLILEIWEQDIYAVRLCQCKVYWSGPGMPEHGPPNPMEREK
KIKVFSLNDFLQGLILFQKGEAPNPPPFEIYFCFGEDWPDKKPKEKKLIMVQVIPVVARI
LTEMFSGELSWSTDSIRLQISNPDVKDRTVAQFKELQRLLQSQNIQGPWNPTGP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccagccccggcgtgtccgcctgaagccctggctgctggcgcaggtgaacagc
ggtaggtaccccggcctgcagtggctcagcgcagaccaccgcctcttccagatcccctgg
aaacacgccacgcgccacacgcccgtgtcagacgaggagaacaccatcttcaaggcatgg
gctctggagacggggaagtaccaggagggagtagatgaacccgaccctgccaagtggaag
gcaaatctgcgctgtgctctgaacaaaagccgtgagtttcagctgaagtacgacggcacc
aaagagacgccggttcagccgtacaagatctacgaagtgtgcgagcaccccgggagcaca
gacggcgctgaggacgatgatgaggagatgcccaacctgatggacctctccatcaacccc
aggctgggtgactccgccccctttgcctccttcccggctccctcagagatgaaccagttc
agcctaccccctaacgggacatttggaccgccgcatatcccagtgcctctgcttcctgac
atcaccatgacctctgacctccagggtcaggcacacttcctccataacggacttcaggat
ctgaacgctgccgccgtgcaaccagagccggacctaatggaggccagcggcatggtgggc
gtccagaaccaggcagagcctcagaaccaccagccctgcaagtatgacctgctgagcagc
gtcccactaacagatctggacctgaagttccagtaccggggccgtacagtgggctctctg
accgtcagtaaccctcaggggtgccggctgtactacggacacctggaaccgaccccagag
caggtggacctgttcgggcccgtcaacctccagcaggtgctgttcccgggaacatcagag
atgcagaacgagaaacagcgattttacaccgaggccttgctggacgtgatggaccgcggc
ctgatcctggagatctgggagcaggacatctacgccgtccgcctttgccagtgtaaggtg
tactggtctggaccgggcatgcccgaacacggcccgcccaaccccatggagagagagaag
aaaatcaaggtcttcagcctcaacgacttcctgcaggggctgatcctgtttcagaaaggc
gaagccccgaacccgccacccttcgagatctacttctgctttggggaggactggcccgac
aaaaagcccaaagagaagaagctcatcatggtgcaggtgattcctgtggtggcccggatc
ctgacagagatgttctccggagagctgagctggtccacggacagcatccggctgcagatc
tcaaatcccgacgttaaggatcggacggtggcacagttcaaagagttgcagaggctcctg
cagagccaaaacatacaggggccctggaaccccactggcccctga
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integrated database retrieval system