Oreochromis aureus (blue tilapia): 116316161
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Entry
116316161 CDS
T07295
Symbol
nr1i2
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2
KO
K08540
pregnane X receptor
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116316161 (nr1i2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oau03310
]
116316161 (nr1i2)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116316161 (nr1i2)
Nuclear receptors [BR:
oau03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
116316161 (nr1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF5702
Motif
Other DBs
NCBI-GeneID:
116316161
NCBI-ProteinID:
XP_031590529
Ensembl:
ENSOABG00000015065
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All DBs
Position
LG16:complement(19934017..19943626)
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AA seq
441 aa
AA seq
DB search
MSEKATGVQIISEVLARQNKGDEEEKLTDDEEPRVCGVCGDLANGYHFNALTCEGCKGFF
RRTIKRSNQLRCPFLNKCVITKNSRRSCQACRMRKCQAIGMCKDMVMSDEKVLERRVKIK
KKKILNTPVQLSSQQEKLIQELLFGHRSTFDSAFSRFSGFRPMDRNILPVNTHKQTASKL
FNPLTECPRNACSTASKSTTEPTSSPSATSCCLSSSRFHSSIKKQEHHIRNDVENRCVFT
ALPHVADLTTYMIQDVISFSKSLQDFQSLTMGDQISLLKGATFEIMQIRFNMVFNSKTST
WECGHITYCIDDAVRAGFQPLLLEPLFRFHHTLRTLGLQEEEYVLMQAMSLFSPDRPGVQ
QHSLIDKVHENLALTLKTWIDCKRSGPEKHLLYPKVIACFTEMRTMTEEYSKQILQIQDI
QPDTITPLIMEVIGKSSSNDL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaaagccactggagtgcagatcatcagtgaagtgctcgcaaggcagaataaa
ggggatgaggaggagaagctgacagatgatgaggagcccagagtgtgtggtgtctgtgga
gatctggcaaatggttaccacttcaatgccttgacctgcgaaggctgcaagggcttcttc
agacgtaccataaagaggtcaaaccaactccgctgtccattcctgaataaatgtgttata
acgaaaaacagccgccggtcttgtcaagcctgccgcatgcgcaagtgtcaggccattggc
atgtgcaaagacatggtcatgtctgatgaaaaggtgctggagagaagggtcaaaatcaag
aaaaagaagatacttaacaccccagttcagctttcatcccaacaagaaaaacttattcag
gaactgctctttggtcaccgcagcacattcgactcggcattttcccgcttcagcggcttc
aggcctatggaccgaaacatccttcctgtgaatacgcacaagcagacggcaagcaagctc
tttaaccctctgaccgagtgccctagaaacgcctgcagcactgcgagtaaatctaccacc
gagcccacatcatcgccatcggccacctcatgctgtttatcctcctcccgtttccacagt
tccattaaaaaacaagaacaccacatacggaacgatgtcgaaaacagatgtgttttcacc
gctcttccgcatgtggccgacctcacgacttacatgatccaggacgtcattagcttttcc
aaaagtctccaggacttccagtctcttaccatgggagaccaaatatctctgctgaaggga
gccacgtttgaaataatgcagatccgttttaacatggtgttcaactcaaaaacaagcaca
tgggaatgtggccatattacatactgcatagatgacgccgtacgagcgggatttcagcca
ctcctgctggagcccctgttcagatttcaccacaccctgcgcacactgggcctacaggag
gaagaatacgttctcatgcaagccatgtctctgttttctccagatcgtccaggcgtgcag
caacacagcttgattgacaaggttcatgaaaacttggcactgacgctaaaaacctggatt
gactgcaagagatcaggtccagagaaacacctgctgtatcccaaagtgatagcctgcttt
acggagatgagaacaatgactgaggagtacagcaaacaaattctacagatccaggacatc
cagcctgacaccatcactcctctcataatggaggtgatcggtaaaagctcctctaatgac
ttatga
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