Oreochromis aureus (blue tilapia): 116318534
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Entry
116318534 CDS
T07295
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oau04040
]
116318534
Ion channels [BR:
oau04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116318534
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
116318534
NCBI-ProteinID:
XP_039469275
LinkDB
All DBs
Position
LG6:complement(28056369..28090326)
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AA seq
1638 aa
AA seq
DB search
MSFFDFWSSTKERGALVRRANQLRLNPSQLTLLLGDNKIRAALQDDSMVSLLPPVGTEVF
RRFTTASQEVQQQHVAEAKERKTWKDKWVTEKNLPKPAAHLETGKSLPLIYGDPPPQLLN
TPLEDLDPFYQSRKTFVVLSKGNIINRFSADSSCYLLSPFYPLRTLAIKTLLHPFFSIFI
LLAILSLGVLRFNFPVMNYVYMAIFIFEALVKIVARGFCVGLFTFLRDPWNWLDIIIIST
LLVSQFIDLGKFAVLMTISLLLKSFTCSQGLKKTVEALVQSVKRLDCVIILTVFCLSILA
MIGLQLFMGTLKYKCVIWSMNTNTTEFDFHNHTTSPENYYYIPGHPDPLVCGNQSDAERC
PDGFNCVKAGSNPNFGYTSYDSFFWSLMSLFRLMMHDFWEGLMQLTLRAAGKSYLIVFLL
VFFPGCFFMLSLILAVVVMTRAEQEEAQGAEAIQREEEFGRIVEVLKRREEEEEQASSRA
ETPEQQDSLQKKKPAAGIRATKQEHVEEAEEHHRPLCCTCTDAFLKGDCCGCWRWLKQQF
HTFITNPFFDLVIISCIIVSTIITAIEHYPMMVEFMETLVIAHLVFHGIFAAEMIIKLVA
LGLHGYFQVRWHIFDFILVIISLVHLGLADVEGLSLLRSFLPFRVFRLARWWPMLHMFLK
IVWASVGNLTLVLFITVFMFSVAGVQLFQSDYKANVCRISYDCQLPRWHMEDFFHTFMLV
FRVLCGQCLEYLWDCMEVSNDGVCVTFFMIVLIVGKLLILHLFLNLLFINDQLVDSEDKT
TNTLQRTMKQTRTWIPKSIWTLWEKNYADQDHKGETKKDNKEEYLALSSVSSDQLTLDDN
HTNMAAWEAPVAVAEIEFRTPENTQEKETQHCDVMQKLKDETHPEPEDCCCNRCYICCPF
LEIDTSRGTGRVWSNFRRACLCIVQHKFFEGFIVFIILLSCAALVFEDIYLEHRPVLQRV
LKMADLVFTFVFLVEMLLKWIAFGFKKYFTSFWCWLDFLILDVTLFSLMGNMLGYTSRPL
RALRTLRVPSRFKGMRVVLKVLAVTLPSMFSMLLVILVIWLFFSVIGVNLFAGKFYYCYN
ETSEEIFSFYVVNNKTECFSLMVMNFSEVNWKTWTFNFDNVGMGFLSLLIMGTSSGWMDI
MYAAVDSTQVEDQPRYEINVYMYMYFICFIIIGCFFTLNLFIRVIIDTIHQQRHKFGGKH
VFVTDQQQKYLNTIKKRFSEKRNNTIPRPQHCCLAWLFHLVTALYFEIFMVVVIFFNMVV
LMVETDDQSMEKSHVLHWIHFILVAIFLVEFILKIIALRQHYFRNGLHIVDFVVLTLSII
GLLLSDIFEKYFGSPSLFSVMRLGRLFALCGPFHHIRFARRIWMLIMGFVMSLPALFNIG
LLFFLIVYTFSIIGMFNFAYVKNEMMIDDMFNFKTFGNSIISMTMITTSSGWDSLLSLIM
NTPPDCDLRLPDPGNCANPTVGIVFFSSYILLFCLLVIHLFIVVILELFNTASPEDAEML
SDDHLQMFYETWRKFDPSGSQVIQYSELADFCDGLQDPLRIPKPNTIKLTHLNLPLLPGD
QISCLDVLRTITTQVFDEPAEVDALKAKLDEIVRIHSQGSREPTTTSPAQEETDMIQKHV
QGGDTERTLVQAVGGELQ
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttttgatttctggagcagcacgaaggagagaggcgcgctggtgaggagagcc
aatcagctgaggctgaatccttcacagctaaccctgctgctaggtgacaacaagatccgg
gcggcactgcaggatgacagcatggtgtctctgctgccacctgtgggtacggaggtcttc
agacgcttcacaacagcctcacaggaagtccaacaacaacatgtagctgaggcaaaggag
cgaaagacatggaaggacaaatgggtaactgagaaaaacctgcccaaaccagctgctcac
ctggagactgggaagtccctccccttaatctatggggacccaccccctcagcttctcaac
accccattggaggatctagatcccttctaccaatcacggaagaccttcgtggttctcagt
aaaggaaacatcattaacaggtttagtgctgactcgtcttgttacctgctgagtccattc
tacccgctgaggaccctcgctatcaagacccttcttcatcctttcttcagtatattcatc
ctactggcgatcctgagcttaggtgttctgcggttcaactttcctgtaatgaactacgtg
tacatggccatcttcatctttgaggctctggtgaaaatcgtggcgagaggcttctgtgtg
ggactcttcaccttcctcagagatccctggaactggctggacatcatcatcatcagcacc
ctattggtgtcacagttcatagatttggggaagtttgctgtgctgatgacgatttctctg
ctgctgaagagcttcacatgcagccaaggtctgaagaagacggtcgaagctcttgtccaa
tcggtgaagaggcttgattgtgtcatcatcctgacggtgttctgcctgagcatcttggct
atgattggtttacagctcttcatgggaaccctgaaatataaatgtgtcatctggtcgatg
aacacaaacacgacagaattcgatttccacaaccacaccacctctccagaaaactattac
tacattcctggacatcctgatcctctggtgtgtggaaaccagtcagacgctgagcgctgt
ccagatggtttcaactgtgtgaaagcaggaagtaacccaaacttcggatacaccagctac
gactcgtttttctggtctctgatgtcacttttcagactcatgatgcatgacttctgggaa
ggcctgatgcagttgacgttgcgagctgcaggaaaatcctatctgatcgtctttctgctc
gtcttcttcccgggttgtttcttcatgctcagtctcattttggcggtggttgtcatgaca
cgagcagagcaagaagaggctcaaggtgccgaggccatacaaagagaagaggagttcgga
cggattgtggaggtgctgaagaggcgagaggaggaggaggagcaggcttccagcagggca
gagactccagagcaacaggactcactgcagaagaagaaaccagctgccggtatacgagct
accaagcaagaacacgttgaagaggcagaggagcaccaccggcctttgtgctgcacctgc
actgacgccttcctgaagggggactgttgtggctgctggcgatggctcaaacagcagttt
cacacctttatcacgaaccctttctttgacctggtcatcatcagctgcatcattgttagc
accatcatcacagccattgaacattaccctatgatggtggagttcatggagaccctggtc
atcgctcatctggtcttccatgggatctttgctgctgagatgatcatcaaacttgttgca
ctgggcctgcatggatacttccaggtgcgctggcatatcttcgactttatcctcgtcatc
atttctctggtgcacctgggactggctgacgttgagggtctatctttgctgcgcagtttt
cttccattccgagtgtttaggctggcccgttggtggccgatgctccacatgtttttgaag
atcgtctgggcctcagtggggaacctgactctggttctattcatcacggtcttcatgttc
tctgtggcgggtgtgcagctgttccagtcggactacaaagctaacgtctgtcgcatttct
tatgactgccagcttcctcgttggcatatggaagactttttccacaccttcatgctcgtc
ttcagggtcttgtgtggacagtgtttagagtatttatgggactgcatggaggtctcgaat
gatggcgtgtgtgtgaccttcttcatgattgtcctgattgttggaaagctgctgatccta
catctgttcctgaatttattgttcatcaatgatcagctggtggattcagaagacaaaaca
acaaacaccctgcagagaaccatgaaacagaccagaacctggatccccaagagtatctgg
actttgtgggagaagaactacgctgaccaagatcacaaaggtgaaactaagaaagacaac
aaggaggagtatctggccttaagctctgtgagctcagaccagctgaccctcgatgataac
cacacaaacatggccgcctgggaggcccccgtcgctgtggctgagattgagtttaggacg
cctgaaaatacacaagaaaaggagacgcagcattgtgacgtcatgcagaaacttaaagat
gaaactcatccagaacctgaggactgctgctgcaacaggtgttacatctgctgtccgttc
ctggaaatagacacatcccggggtaccggcagggtctggtctaacttcaggagagcctgc
ctctgcatcgtgcaacacaaattctttgagggcttcatcgtcttcatcatcctgctgagc
tgtgcagctctggtttttgaggacatctacctggagcatcgtccagtcttgcagagagtt
ttgaagatggcagacctggtgttcaccttcgtgtttctggtggagatgctactgaagtgg
atcgcttttggattcaagaaatacttcacaagcttctggtgttggctcgacttcctcatc
ctagatgtgactctgttctccctgatgggcaacatgcttggatacaccagccggcctctg
agagctctgaggactctgagggtcccgtctcgcttcaagggcatgagggtggtgctgaag
gtacttgccgtgacgctgccctccatgttcagcatgctgctggtgattctggtcatctgg
cttttcttcagtgtgataggagtgaatctgtttgcaggaaagttttattactgttacaac
gagacatcagaggagattttctccttttacgtggtgaacaacaagactgaatgcttttca
ctgatggttatgaatttctctgaggtcaactggaagacgtggacgtttaattttgacaat
gtggggatgggtttcctgtcgctgctgatcatggggacatcttcaggctggatggacatc
atgtatgcagctgtggactccacacaagtggaagaccagccacgctacgagatcaatgtg
tacatgtacatgtacttcatctgtttcattatcatcggctgcttctttacgttgaacctc
ttcattagagtcatcattgatacgatccaccagcagagacacaagttcggagggaaacat
gttttcgtgacggaccagcagcagaaatatttaaacaccataaagaaacgattctctgaa
aaacgcaacaacaccattccacgacctcagcattgctgcctggcttggctgtttcacctg
gtcaccgctctgtattttgagatcttcatggtggtggtgatcttcttcaacatggtggtt
ctaatggtggagactgatgatcagagtatggagaagtcacatgtcctgcactggatccat
ttcatccttgtggccatcttccttgttgagtttatcctgaagatcattgcactcagacag
cattacttcagaaatggcttgcacattgtggactttgtggttctcactttgtccattata
ggtctcttgttatctgatatcttcgaaaaatatttcggtagcccctcgctcttttctgtt
atgcgattgggtcgtttgttcgccttgtgtggaccattccatcacattcggtttgccaga
aggatctggatgctgattatgggctttgtgatgtcacttcctgcccttttcaacatcggc
ctgctcttcttcctcattgtgtacacattctccatcattgggatgtttaactttgcctac
gtgaagaatgagatgatgatcgatgacatgtttaacttcaagacatttggaaacagcatc
atcagcatgactatgatcaccacgtcctcggggtgggacagcctattgagtctcatcatg
aacacgcctccagactgcgacctgcgattacctgaccctggtaactgtgccaacccgacg
gtggggattgttttcttcagctcctacatcctcctcttctgcctgctggtgattcatctg
ttcatcgttgtcatcctggagctcttcaacacagcgagccctgaggacgctgagatgctg
agtgatgatcacctccagatgttttatgaaacctggaggaaatttgaccccagtggctcg
caggtcatacagtacagtgagctggcagacttctgtgatggtctccaggatcctttgagg
attcccaaaccaaacaccataaaactgacccacttgaatctgcctctgcttcctggagac
cagatcagctgtttggatgttctgcgcacaattactacacaggtgtttgatgaaccagca
gaggtggatgccctcaaagccaaactggatgaaatagtcaggattcacagccaggggtca
cgtgaaccaaccaccacctcaccagcacaggaggagacagacatgatccagaaacatgtg
caaggtggagatactgagcgaacgctagtccaggctgtgggtggagaattacagtga
DBGET
integrated database retrieval system
