Oreochromis aureus (blue tilapia): 116321393
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Entry
116321393 CDS
T07295
Symbol
ldlrb
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03272
Virion - Hepatitis viruses
oau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116321393 (ldlrb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116321393 (ldlrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116321393 (ldlrb)
Membrane trafficking [BR:
oau04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116321393 (ldlrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
DUF5050
Psg1
Vgb_lyase
NADH_B2
Motif
Other DBs
NCBI-GeneID:
116321393
NCBI-ProteinID:
XP_031597089
Ensembl:
ENSOABG00000020566
UniProt:
A0A668V8Z3
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Position
LG6:25003860..25026691
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AA seq
864 aa
AA seq
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MFGIWKGLAGLSACWCLLMLTHCLPQTDAAYICNANQFKCGNGRCITRRWICDGSDDCGD
GTDELPASCGVKICRDSQFSCGDPMSQCIPKDWQCDGKADCTNGADEKNCTAKQCDDHEF
RCANGQCISKSFVCDSDNDCSDGSDEASCPKPTCNPHSFQCNNSMCVPMVWRCDGDSDCS
DGSDEWPQNCEGRKPEKTPRCSSHEFQCANGDCIHGNWKCDGGFDCLDRSDEANCTHSTC
RSDEFQCKDGSCINKSLQCNGHHDCRDFTDEIECDTVCEGSDKFQCRSGECIDMEKVCNK
QNDCKDGSDEPAKECDNNECLSGNGGCSHHCNDLKIGYNCSCPAGYRLKADNKTCEDIDE
CAEPDTCTQICINLPGSYKCDCGDRYMIDPATKTCKAESGTVPTLYFTNRHEVRKLTVDR
SDYVRVIPQLKNAVALDMDMPNKMIFWSDLSLKKIYSSMIDVAGNSSHHSVVVEGGIEAP
EGIAVDWIHGNIYWTDSVLKTISVATTDGSKRKTLIATDLDKPRAITVDPVNNLMYWTDW
GEEAKIEKSGLNGADRTILVKDNIVWPNGITLDMVSQRLYWVDSKLHSLSSIDVNGGARH
SLIINEEKLSHPLSLTVFEEKVFWTDLSNAAVFSANRLTGSDITELAKDLVQPEDIVLHH
ELKQPASSNWCTNGGCEFLCLPAPQNDPQSPRYTCACPDGMVLGPDMKKCVAESTAAPPK
TAAPLPPKGPTNPATPRQPDPTTTTTTTKKPTTTSAVQPSQKTEKPAVTAQGDRQAAVQP
EEAPPSSHPVALYVVLPLMIMALLVFGAMYFWRHWHRKNTNTIHFDNPVYQKTTEDELHI
CRNGSDGYVYPERQMLSMDDTDMA
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatttggaagggacttgccgggctgtccgcttgctggtgtctgttgatgctt
actcattgtttgcctcaaacagatgcagcctacatatgcaacgccaatcagtttaagtgc
ggaaatgggaggtgcatcacccgcaggtggatttgtgatggaagtgatgattgtggtgat
ggaactgatgagctgcctgctagctgtggagtcaaaatctgtcgggattcacagttcagc
tgtggcgatcccatgagccagtgcataccaaaagactggcaatgtgacggcaaagccgac
tgtactaacggcgctgatgagaaaaactgcacggccaagcagtgtgacgatcatgagttt
cgttgtgccaatggccagtgcatatccaagagctttgtttgcgacagcgacaacgactgc
tcagacggctcagatgaggcttcctgtcccaaacccacctgtaaccctcactccttccaa
tgcaacaactcaatgtgcgtgccgatggtgtggcgctgcgatggagacagtgactgctcc
gatgggtctgatgagtggccccagaactgtgagggaaggaagccagagaagacgcctcgc
tgcagctctcacgagttccagtgtgcgaatggggactgtatccatggcaactggaagtgt
gacggagggttcgactgcctggatcgttcggacgaggctaactgcactcattctacttgc
cgctcagatgagttccagtgtaaggacggctcctgcattaacaaaagcctccaatgtaat
ggacatcatgactgcagggacttcactgatgagattgaatgtgatacagtatgtgaaggc
tcagacaagttccagtgtcgcagtggggaatgcatcgacatggagaaagtgtgcaacaag
cagaacgactgcaaggacgggtctgatgaaccagcgaaagagtgcgacaacaatgagtgt
ttgagcggaaatggcggctgctctcaccactgcaatgatctgaagattggctacaactgc
tcctgccctgctggatacaggctgaaggcggacaacaaaacctgcgaagacattgacgaa
tgtgctgagccggacacttgcactcagatctgcatcaacttgcctggcagctacaagtgt
gattgtggagaccgctatatgattgaccctgcgaccaaaacctgcaaggctgaatcaggc
acagtgcccaccttgtacttcaccaacagacacgaggtgaggaagctgacagtggaccgc
agcgattacgtgcgtgtgatcccacagctgaagaacgcagtggctctcgacatggatatg
ccaaacaagatgatcttctggtctgacctgtctctgaagaaaatctacagctctatgata
gatgtggctggcaattcctctcaccacagtgtggtggttgagggtgggatagaggcccca
gagggcattgcggtggactggatccatggcaacatctactggactgacagtgttttgaag
actatttctgtagcaacaacggatggcagtaagaggaagaccctgatcgcaacggacctg
gacaagccacgagccatcacagtcgatccagtaaacaatttgatgtactggacagactgg
ggtgaagaagctaagattgagaagagtgggctgaacggtgcagatcgcactattttagta
aaagacaacattgtgtggccgaatggcatcaccctggacatggtcagccagcgtctatac
tgggtggactccaagctgcactctctctccagcatcgatgtgaatggaggggcccgacac
agtctcattattaatgaggaaaaactctcccacccgctctccctgaccgtctttgaggag
aaagtgttttggacagacttgagcaatgctgctgtgtttagtgccaaccgcttgacagga
agcgacatcaccgagctagcaaaggacctcgtccagccagaagacatcgtactgcaccac
gaactcaagcagccagccagttcaaactggtgcactaatggaggttgtgagttcctgtgc
ctacctgcccctcagaacgacccacagtctcccagatacacctgtgcctgtcctgatggc
atggtcctgggaccggacatgaagaaatgcgtggcagaaagcacagctgcgcctcccaaa
actgctgctccgctcccaccaaaaggtcccacaaatcctgctacacccaggcagccagac
ccgaccaccacaactacaaccaccaagaaacccacaactacctctgctgtgcagcctagt
cagaaaacagagaagcctgccgtcactgctcaaggtgacagacaagcagccgtgcagcct
gaagaagccccaccctcctcccaccctgttgctctctacgttgtgttgccactgatgatt
atggccctgctggtatttggagcaatgtacttctggagacactggcataggaaaaacacc
aacaccatccactttgacaaccccgtgtaccagaaaaccaccgaggatgagttacacatc
tgcaggaacggctctgacggctacgtgtatcctgagcggcaaatgctaagcatggatgac
acggatatggcttga
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