Oreochromis aureus (blue tilapia): 116325269 Help Entry 116325269         CDS       T07295                                  Symbol thbs1b Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism oau  Oreochromis aureus (blue tilapia) Pathway oau04115   p53 signaling pathway oau04145   Phagocytosis oau04148   Efferocytosis oau04350   TGF-beta signaling pathway oau04510   Focal adhesion oau04512   ECM-receptor interaction oau04518   Integrin signaling oau04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oau00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     116325269 (thbs1b)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116325269 (thbs1b)    04518 Integrin signaling     116325269 (thbs1b)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     116325269 (thbs1b)    04148 Efferocytosis     116325269 (thbs1b)   09143 Cell growth and death    04115 p53 signaling pathway     116325269 (thbs1b)   09144 Cellular community - eukaryotes    04510 Focal adhesion     116325269 (thbs1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     116325269 (thbs1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oau04131]     116325269 (thbs1b)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oau00536]     116325269 (thbs1b) Membrane trafficking [BR:oau04131]  Endocytosis   Phagocytosis    Opsonins     116325269 (thbs1b) Glycosaminoglycan binding proteins [BR:oau00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    116325269 (thbs1b) SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF EGF Laminin_G_2 TSP1_CCN DUF859 Laminin_G_1 Motif Other DBs NCBI-GeneID:  116325269 NCBI-ProteinID:  XP_031601970 Ensembl:  ENSOABG00000012665 UniProt:  A0A668TN02 LinkDB All DBs Position LG15 Genome browser AA seq 1168 aa AA seqDB search MKLPGIFLLLMLWTCEAARVAESRDDNSVYDLFELVKVPSKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPENSFRDLIDSIHAERGFLLLLNFKQFRRTRGSLLTVEKKDGSGPVFEIVS NGKANTLDIVFSTENKQQVVSIEDVGLATGQWKNITLFVQEDWAKLYVGCDEVNTAELDA PIQSILTQETPASAQLRVGKGAVKDKFTGVLQNVRFVFGTTLEAILRNKGCQSAMTDTMV LRNLNGSSAIRTEYSGHKTKDLQMVCGFSCEDLLSMFKELKGLGVVVKELSTELRKLTDE NKLIKSRIGIHSGVCIHNGIVRKNRDEWTVDDCTECTCQNSATVCRKISCPLIPCANATV PDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTRD CYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCVGEGRQTE TCTKSPCPINGNWGPWSPWDSCSLTCGGGQQTRKRLCNNPAPQYGGKECVGEAKDIQRCN KTPCPIDGCLSNPCFAGAKCTSFPDGSWKCGKCPAGYTGNGIKCKDIDECKEVPDACFEF NGVHRCENTVPGYNCLPCPPRYSGPQPFGHGVEQAAANKQVCSPRNPCLDGSHDCNKNAR CNYLGHFADPMFRCECKPGYAGNGHICGEDTDLDGWPNSDLVCVENATYHCKKDNCPNLP NSGQEDYDKDGIGDACDNDDDNDSIPDDRDNCPFVYNPRQYDYDRDDVGDGCDNCPYNSN PDQTDTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHNP DQLDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDNDG IPDDKDNCRLVFNPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKFQM VPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNAVDFSGTFFINTDRDDDY AGFVFGYQSSSRFYVVMWKQITQTYWSHKPTKAQGYSGLSIKVVNSTTGPGEHLRNALWH TGNTPGQVRTLWHDPKNIGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSIYDKT YAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3507 nt NT seq  +upstreamnt  +downstreamnt atgaagctgccggggatatttttgttattgatgctttggacctgcgaggctgcgagagtc gcagagagtcgagacgacaatagcgtgtatgatttgtttgagctcgtcaaagtccccagc aagaaccacggggtgaccctggtgaaaggagacgacccgtacagccccgcctacaagatc ctcaacccggacctgatccccccggtccccgagaactcctttagggacctgatcgattcc atccatgccgagcggggtttcctcctactgctcaactttaagcagttcagacgcaccagg ggaagcctcctgactgtggagaagaaggatggatccggacccgtgtttgagatcgtctca aacggcaaagcgaacaccttggacattgttttctccaccgagaacaagcagcaggtggtt tccatcgaagatgtgggtctggctacgggtcagtggaagaatatcacgctgttcgtgcag gaggactgggcaaagctgtacgtgggatgcgatgaggtgaacaccgccgaactggatgcg ccaattcagagcatcctgacgcaggagactccggccagcgcgcagctcagggttggcaag ggagccgtgaaggacaagttcacgggggtcctacaaaacgtgcggtttgtgtttggaacg actctggaagcgattctacgcaacaaaggatgccaaagcgccatgactgacaccatggtc ctgaggaacctcaatggctcctcggccatcagaactgagtacagtggccataagactaaa gacctgcagatggtgtgtggcttctcctgcgaggacctgctcagtatgtttaaagagctg aagggtcttggtgtggtagtcaaggagctgtccactgaactccgcaagctgacggatgaa aacaagctgattaaatcccgcattggaattcacagtggtgtctgtatccacaatggcatc gttcgcaagaacagagacgagtggaccgtggatgactgcaccgagtgcacttgtcagaac tctgctactgtgtgtcgcaagatctcctgccccctgatcccctgtgctaatgctactgtt ccggatggggagtgctgcccacgctgtggaacaccgagcgactatgcagaggacggctgg tcgccgtggtctgaatggacccattgttccgtgtcatgtgggcgtggcatccagcagcgt gggcgctcttgcgaccgtatcaataacaactgtgagggcacctctgtgcaaacccgagac tgttacctccaggagtgtgacaagcgcttcaagcaggacggcagctggagccactggtca ccatggtcatcgtgctcggtcacctgtggtgctggtgtcatcacccgaatccgcctctgc aactccccaactcctcagctaggaggcaaggactgtgttggagaaggccggcaaactgaa acgtgtacaaagtccccgtgtcccatcaatggcaactggggtccctggtctccctgggat tcatgcagtctcacctgcggaggtggtcaacagacccggaaacgcctgtgcaataatcct gcaccacagtatggcggtaaagagtgtgtcggtgaagccaaggacatccagaggtgcaac aagaccccctgcccaatcgatggatgcctgtccaacccttgctttgctggtgccaagtgc acaagttttcccgatggttcctggaagtgtgggaagtgcccagcaggatacactggcaat gggatcaagtgtaaagatatcgatgagtgcaaagaggttcctgatgcatgctttgagttt aatggggtgcaccgctgcgagaacaccgttccaggctataactgtttgccctgcccacct cgttactcaggaccccagccgtttggccatggtgtggagcaggctgctgctaataagcag gtgtgctcaccccgtaatccctgccttgatggaagccatgactgtaacaaaaacgcccgc tgtaactatcttggacactttgctgaccccatgttccgatgtgagtgcaaacctggttat gctggcaatggccatatctgcggagaggacacagatctggatggatggcccaattcagat ttggtgtgtgtggaaaacgccacctaccactgcaaaaaagacaactgtcccaacctcccg aactcagggcaagaagattatgataaggatggcattggagatgcttgtgacaatgatgat gacaacgatagtattcctgatgatagggacaactgtcctttcgtgtacaatcccaggcag tatgactatgaccgtgatgatgtgggtgacggctgcgacaactgcccctacaatagcaac ccagaccagacagacaccgacaacaacggagagggagatgcctgtgcagtggacattgat ggagatggcatactgaatgagaaggacaactgtccctatgtgtacaatgttgaccagaga gacacagatctggatggagtgggagacatgtgtgataactgcccactagaacataatcct gatcagttggattcagatgatgaccgcgtgggagacaagtgcgacagcaatcaggacatt gatgaggatggacaccagaacaacctggacaactgcccgtatattcccaacgccaatcag gctgaccatgacaaggacggcaaaggtgacgcctgtgaccatgatgacgacaacgatggc atccctgatgataaagacaactgcaggctggtgttcaatcctgatcagctggactctgat ggtgacggccgtggagatgcttgcaaagatgactttgatcaggacaatgtgcctgacatc tatgacgtgtgtcccgagaactttgacatcagtgagacagacttccgcaagttccagatg gttcctttggatccaaaaggcacctcccagattgatcctaactgggtcgtccgccaccag ggcaaagagctggttcaaactgttaactgtgaccctggcattgctgttggctaccatgag ttcaatgcagtcgacttcagtgggactttcttcatcaacactgacagggatgatgactat gccggctttgtgtttggctaccagtccagttccaggttctatgtggtgatgtggaagcaa atcacacagacctactggtcacataagccaactaaggcacaaggttactctggcctgtcc atcaaagtggttaattccaccaccggcccaggagagcacctcagaaatgccctctggcac acaggcaacaccccaggacaggttcgcactctctggcatgacccaaagaacattggatgg aaagacttcactgcctacagatggcatctgatccacagaccaagaacaggacacattcga gttgtcatgtatgagggtaagaagatcatggctgactctggtagcatctatgacaagaca tatgcaggtggcaggctaggtctttttgtcttttcacaagagatggtatacttctcagac ctcaagtatgaatgcagagatgcataa

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