Oreochromis aureus (blue tilapia): 116326860
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Entry
116326860 CDS
T07295
Symbol
ldlra
Name
(RefSeq) low density lipoprotein receptor a
KO
K12473
low-density lipoprotein receptor
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03272
Virion - Hepatitis viruses
oau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116326860 (ldlra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116326860 (ldlra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116326860 (ldlra)
Membrane trafficking [BR:
oau04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
116326860 (ldlra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
DUF5050
Vgb_lyase
EGF
Trp_oprn_chp
Motif
Other DBs
NCBI-GeneID:
116326860
NCBI-ProteinID:
XP_031604148
Ensembl:
ENSOABG00000019964
UniProt:
A0A668V264
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All DBs
Position
LG4:complement(28606438..28616502)
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AA seq
921 aa
AA seq
DB search
MRLLCCASLLFLINLVLQTNALITCGTNQFQCGNGRCITLRWVCDGSDDCGDGTDELPGT
CAVKTCKPTEFSCAGRLNQCIPSTWHCDGKADCENGADEVNCAAKQCTESEFRCKSGQCV
SSSFVCDDDVDCEDGSDEESCPPVTCSSASFQCNNTVCLPRLWACDGDRDCSDGSDEWPE
TCGTKTPDLVSIHHCSSMEWRCGSGECIHVSWKCDGQADCLDQADEANCSRVTCSPDEFE
CGDGTCIHGSLQCNHQYDCRDMSDEIGCVNATHCEGPTRFKCRSGECISMEKVCDKKRDC
RDWSDEPLRECDSNECLYNNGGCSHICKDLKIGYECLCPPGYSLVDTRRCEDIDECANPD
TCSQICINQMGSYKCECEEGYQVDPATKHCKAIGTIAYLFFTNHHEVRKMTLDKSEYTRV
IPRLKNVVALDMNMATKEIYWSDISQKKIYKTPMDSAEDSTQHHIVIGNDIDAPEGIAFD
WVHGNLYWTDSVRGTVSVVTADGSRRKTLFHQDLSKPRAIVVDPQSNFVYWTDWGNPAKI
EKAGLNGGDRTALVTDNIMWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGGRRTLIIDE
HKLAHPLGLAVFEEKVFWTDVSNSAILSANRLTGEDIVPLAEHLSSPEDIILFHNLKQPA
GRDWCQVFSGGCEFLCLAAPQIGRHPPKYTCVCPDNMTLARDMRTCVPAVPTPEATGLPQ
VPATSPPHLLPVSPSTTLRTILRTTPRTTPRTILRTTPRTIVKPKFHTTTTVPVLTPSTV
ARPVLRLTSPPFRPTTPQPRTPLLQPGNPKVSQTTAQAPVTSPNIRPEFTEVLTETVSTT
PIALYVILPLVVAALVAVGGVLLWRNYRLKNTSTIHFDNPVYQKTTEDQVHIWRSLDGYS
YPKRQVVSLHDEADNPVFADN
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagattgctgtgttgcgcctccctgctgtttctcatcaacctcgtccttcagacaaat
gcactgataacatgtggaaccaaccagttccagtgtgggaatgggagatgtatcacactg
aggtgggtgtgcgacggctctgatgactgcggagatggcacagatgaacttcctggtacc
tgtgcggtcaaaacatgcaaaccaacagagttcagctgtgcagggcgtcttaaccagtgc
atcccgagcacgtggcactgcgatggtaaagctgactgtgagaacggcgctgatgaggtg
aattgtgcggccaagcagtgcacggagtccgagttccgctgcaagagcggccagtgcgtg
tcgtcctcctttgtgtgtgatgacgacgtggactgcgaggacggcagtgacgaggaatcc
tgcccgcccgtcacctgcagttccgcttccttccagtgcaacaacacagtttgccttcct
cgcctgtgggcctgcgacggggaccgcgactgctccgacggctcggatgagtggcccgaa
acctgcgggacaaagactcctgacctcgtgagcattcatcactgctcctcgatggagtgg
cgttgtggcagtggagagtgcatccatgttagctggaagtgtgatggacaggctgactgc
cttgatcaagcagatgaagctaactgctctcgtgtcacctgttctcctgacgagtttgaa
tgcggcgatggtacttgcatccatgggagcctgcagtgcaaccatcaatatgactgcagg
gacatgagcgatgagattggctgcgtgaatgcgacccactgtgagggcccaacccggttt
aaatgccgcagcggagagtgcattagtatggagaaggtgtgcgataagaaacgtgactgc
agggattggtcggatgagcctcttagggaatgtgactccaatgagtgcctgtacaacaac
ggcgggtgctctcatatttgcaaagacctgaagatcggttatgagtgcttatgtccccct
ggatacagcctagttgacacaaggcgctgtgaagatatcgacgagtgtgccaacccagac
acctgcagtcaaatctgcatcaatcagatgggcagctacaaatgtgagtgtgaggagggt
taccaagttgacccagcaactaaacactgcaaggccattggaacaatagcctaccttttc
ttcactaaccatcatgaggtcagaaagatgactctggacaaaagtgaatacacgagagta
atccctcgcctaaagaacgtcgtggcgctcgacatgaacatggccaccaaagagatctac
tggtcagacatatcccagaagaaaatctacaaaactccaatggactcggctgaagactcc
actcaacaccacatcgtgatcggtaatgacatcgatgctcctgagggaattgccttcgac
tgggtccatggtaacctttactggaccgacagcgttcgtggcacggtctcagttgtaact
gctgacggtagccgacgcaaaaccctcttccaccaggacttatcgaaaccccgcgctatt
gtggtagacccccaaagcaattttgtttactggaccgactgggggaatccagctaagatt
gagaaggcaggtcttaatggaggagaccgcaccgcactggtcactgacaacatcatgtgg
cctaatggcatcacactcgacctgctaaaccagcggctctactgggtggactctaagctg
cacaccctctccagtatcgatgttcagggcggtggtcgacgcacgctcatcattgatgaa
cacaaactcgctcacccactagggctcgctgtatttgaggaaaaagtgttttggacagat
gtgagtaacagtgccatcctcagtgccaacagactgactggtgaggacattgtgccgctg
gcggagcacctatcgtcaccagaagacattatcctgttccataacctcaaacaacctgct
ggaagagactggtgtcaggtgttcagcggtggttgtgaattcttgtgcctggcagctcct
caaataggaagacatccccccaaatatacctgtgtctgtccagataacatgacgctagcc
agggatatgaggacatgtgtaccagctgtgccgacacctgaagctactgggctgcctcaa
gttccggccacaagtcctcctcatctgctaccagtatcacccagcaccacactgagaacc
atactcaggactacacccaggaccacaccgaggaccatactcaggactacacccaggacc
atagtgaagcctaagtttcacacaactactacagtgcctgtcttaacccccagcactgtc
gccaggccagtgctacggcttaccagtcctccattcaggcccaccacaccccaaccaagg
acgcctttgctccagccagggaatcctaaagtctcccagaccaccgcacaagctccagtc
acctctccaaatatccgacctgaatttactgaagtgctaaccgagactgtctctaccacc
ccaatagcactttacgttatactacctcttgtggtcgccgctctggtggctgttggtggc
gttctgctctggaggaactacaggctgaagaacaccagcacaattcactttgacaacccc
gtttatcaaaaaaccactgaggaccaggtgcacatttggaggagccttgatggttactca
tacccaaaaagacaagttgtgagcttgcatgatgaggcagacaatccggtcttcgcagac
aactga
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