Oreochromis aureus (blue tilapia): 116327980
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Entry
116327980 CDS
T07295
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04620
Toll-like receptor signaling pathway
oau04621
NOD-like receptor signaling pathway
oau04622
RIG-I-like receptor signaling pathway
oau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116327980 (traf3)
04621 NOD-like receptor signaling pathway
116327980 (traf3)
04622 RIG-I-like receptor signaling pathway
116327980 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116327980 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
Sina_ZnF
zf-C3HC4
Crescentin
ATG16
zf-C3HC4_2
zf-TRAF_2
MctB
DUF4201
DUF724
DUF1664
KxDL
Fzo_mitofusin
FapA
CENP-F_leu_zip
FlaC_arch
UPF0242
Fez1
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
116327980
NCBI-ProteinID:
XP_031605541
Ensembl:
ENSOABG00000003959
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All DBs
Position
LG19:complement(1655274..1663618)
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AA seq
591 aa
AA seq
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MSAGRSADGREVQIPLQQVAPSLISPLSAAPPSHRPANLWPSSEPTAQQGVPAGFLPLHG
GFRDHFVETPEAKYCCEACRLVLCQPRQTECGHRFCNSCICDILSRPNPVCPADMEPLFR
DKIFKDVCCHREIMSLKVYCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCKERMM
RKEIPDHLSWKCKHRETTCEFCSTKMPLTDLQKHKDTVCPAFPVMCPNHCSFTSLPRSEL
SGHQHDCPKAQVSCQFHRYGCMFKGLNQDMRQHESTFAAEHLKMMANRNLSLENKVEDVK
GELMERYKVLPALSSRLSELENQNEELREKNRQMEQKLATMQKLMSSHSEKLLEVELELH
SLRLLRDEVESLRGTLESVRTRLAALEQGGRGGSGSTTHTLASLETQLNRHDDMLSVHEI
RLADMDLRFQVLETASYNGTLIWKIRDYKRRKQDAVAAKTLSLYSQPFYTGYFGYKMCAR
VYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKPDPN
SSSFRRPVAEMNIASGCPLFVSQNVLETGTYIKDDTIFIKVTVDTSDLPDL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggggaggagtgctgacggcagggaggtgcagattcccctccagcaggtggca
ccctcccttatttcgcccctctcggcagccccgccctctcaccgcccagccaatctgtgg
ccttccagtgagcccaccgctcagcaaggtgtgcccgcaggcttcctgcctcttcatggc
ggcttcagagatcactttgtagaaactccagaagctaaatactgctgcgaggcgtgcagg
ctggtcctgtgtcagccccgccagaccgagtgtggacaccgcttctgtaacagctgcatc
tgcgacatcctcagtcgtccaaacccggtgtgtccggctgacatggagccactgttcaga
gacaagatcttcaaagacgtttgctgccaccgggagatcatgtcgctgaaggtttactgc
cgcagcgaggcaaacggctgtcaggagcagatgagtctgcagcagatacctgaccacctg
aacgtgtgtccgttcttcgaggttccctgcccgctgggaaagtgtaaggagaggatgatg
aggaaggagattcctgaccacctgagctggaaatgcaaacacagagagaccacctgcgag
ttctgcagcacgaagatgcccctgacagacctgcagaaacacaaagatacggtttgtccg
gcgttccccgtgatgtgtccaaaccactgttccttcacctccctgccccggagcgagctc
tccggtcaccagcacgactgtcccaaagctcaggtcagctgtcagttccaccgctacggc
tgcatgttcaagggtttgaaccaggacatgaggcagcacgagtccaccttcgcagccgaa
cacctgaagatgatggcaaacaggaacctatcgttagagaacaaggtggaagatgtgaaa
ggtgagctgatggagcggtacaaggtgcttcctgcgctcagcagccgactgtcggagctg
gagaaccagaacgaggagctgagggagaagaaccggcaaatggagcagaaactcgccacc
atgcagaaactaatgagctctcactcagagaagttgctggaggtggagctggagctgcat
tctctccgtctgctcagagatgaggtggagagcctgcgaggaacgctggagagcgtacgg
acgaggctcgccgctctggagcaaggtggacgcggcggatccggatccacgacacacaca
ctggcatccctggagactcagctgaatcgccatgacgacatgctgagtgtccacgagatc
cgattggctgacatggacctgcgtttccaggtgctggagacggcgagctacaacgggact
ctaatctggaagatccgcgactacaagaggcggaaacaggacgcggtggcggcaaagacg
ctgtcgctgtactcgcagccgttttacaccggatacttcggttacaagatgtgtgctcga
gtttacctgaacggagacggcatgggcaaggggacgcacctgtcgctgttctttgtggtg
atgaggggcgagtacgatgccctgctgccctggcccttcaaacaaaaggtgaccctgatg
ttgatggaccagggtccctccaggaagcacctgggcgacgccttcaaaccggacccgaac
agcagcagcttccgccgtccggtggccgagatgaacatcgcgtccggctgcccgctgttc
gtgtcacagaatgtcctggagacggggacctacattaaagatgacaccatcttcatcaag
gttaccgtggatacctctgaccttcctgacctgtaa
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