Oreochromis aureus (blue tilapia): 116329079
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Entry
116329079 CDS
T07295
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04010
MAPK signaling pathway
oau04020
Calcium signaling pathway
oau04510
Focal adhesion
oau04540
Gap junction
oau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116329079 (pdgfrb)
04020 Calcium signaling pathway
116329079 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116329079 (pdgfrb)
04540 Gap junction
116329079 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116329079 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oau01001
]
116329079 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oau04090
]
116329079 (pdgfrb)
Enzymes [BR:
oau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116329079 (pdgfrb)
Protein kinases [BR:
oau01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116329079 (pdgfrb)
CD molecules [BR:
oau04090
]
Proteins
116329079 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
Adeno_E3_CR1
C2-set_2
V-set
VEGFR-1-like_Ig-like
Haspin_kinase
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
116329079
NCBI-ProteinID:
XP_031606873
Ensembl:
ENSOABG00000025030
LinkDB
All DBs
Position
LG2:complement(11063513..11091553)
Genome browser
AA seq
1104 aa
AA seq
DB search
MRKVTASPLHLTVTFTALLCFCTELRCLEITPGDKEFVLAKGSSLTLTCSGSGETTWKFK
MDDVPYFQLEPSKPGHRSYEIVQSGATSSVLTLFNVSWKHTGVYQCVDQRTRDTEEVAVF
VPDPDVWFIESSHGMVTKTSEESTIPCVVTNPKITVTLHERDTDIPVSGVYVPSEGYKAP
VEDRNYVCRGELNGEERESQDFYVISIVVPEAIDAYINASKTVLKQGEPLTVNCTVHGVE
LVNFSWDIPNRGLDFYEPLTDVLSPTSMRSCLIFSQATVDHSGKYVCHVHEGIQDQSASA
SVNITVLENGFVDIKPPQQRNISVKLQENVELRVAMEAYPPPQVYWTKDGATIQGDKIIT
TRQEHEISYVSVLTLVRVRTDQKGLYTVLVTNGDDTKEMTFDLEVQVPAQIKDLTDHSLK
GKRHLVTCVAEGVPAPTIQWYSCGSMLKCSNQTEVWKPLTPEPEVLSIHTNVSYNETRKV
SQVRSQLTFQTPQQVTVRCETSNQEGLISRRDIKLVFSSLFSQVAVLAAVLALVVIVIMS
FIILVAIWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMRRDHLVLGRTLGS
GAFGRVVEATAYGLTDSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLL
GACTKHGPLYLVTEYCRYGDLVDYLHRNKHTFLQYYAEKNQDYSCLISRGSTPLSQRKGY
VSFGSESDGGYMDMSKDEPSVYVPMQEQIDSIKYADIQPSPYESLYQHGFYQEQGGNSLD
LVISDSPSLTYEDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLAR
DIMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPM
NELFYSALKGGYRMAKPTHASDEVYEIMKKCWDEKFEKRPEFSFLVHSVGNMLTDSYKKK
YNQVNENFMKSDHPAVARTKPRLTSPFPVANPAFGTPSPVTLQSPLDAYNQNSRPRQDFR
QEAQEVIPSYNEYIIPIPDPKPEDAFTDMPSESPGSSVGLGAETDSMSQDTADTLPEEDR
LEETSERDALLGSSGTPEVEDSFL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggtgacagcatccccgctccacctgacagtcacatttacagctctgctgtgt
ttctgcactgagctgcgctgcctggagatcacgcccggcgacaaagagtttgttctggcc
aagggctcctctcttacccttacctgcagcggctcaggggagaccacgtggaagtttaag
atggacgacgtgccgtactttcagctggaaccatctaaaccgggtcaccggagctacgag
atcgtgcaaagcggagccacatccagcgttctgacattgttcaatgtgagctggaagcac
acaggcgtgtatcagtgcgttgatcagcgcactcgagacacagaggaggtggctgtgttt
gtcccagatcctgacgtgtggttcatagagagctctcacggcatggtaacaaagaccagt
gaagaaagcaccatcccctgtgtggtcaccaatccaaaaatcactgtcaccttgcacgag
agggacactgacatacccgtaagtggggtgtatgttcctagtgagggctacaaggcgccg
gtggaggacaggaattacgtgtgtcggggagagctgaacggggaagagagagagtctcag
gacttctatgtcatcagcattgtggtcccagaggccattgacgcctacatcaatgcttcg
aagacggtcctgaagcagggtgaaccactgacagtaaactgcacagtgcacggagtggag
ttggtgaatttttcttgggatattcccaacagagggcttgacttctacgagccactgact
gatgtcctgtcccccacgagcatgcgctcctgcctcatcttctcccaggccacggtggac
cacagtggaaaatatgtctgccacgtccatgagggtatacaagaccagagcgcctctgcc
agcgtcaacatcactgtgcttgaaaacggctttgtggacatcaaacctcctcagcaacga
aacatttcagtcaagctacaagagaacgtggagctgagagtggcgatggaggcgtaccct
cccccacaggtttactggaccaaggatggcgccaccatccagggagacaaaatcatcacc
acaagacaagagcatgaaataagttatgtcagtgtcctcaccttggtgagggtgaggaca
gaccagaagggcctctacactgtccttgttaccaacggagatgacacaaaggaaatgacc
tttgacctggaggtccaagttcccgctcagattaaagacctgactgaccacagtctcaaa
gggaaaagacacttggtgacctgtgttgctgaaggggtcccagccccaaccatacagtgg
tacagctgtggcagcatgctcaagtgtagcaaccagacagaggtgtggaagccgctgaca
ccagagccagaggtgctgagcatccatacgaacgtgagctacaatgagacaagaaaggtc
agtcaggtgcgcagccagctgaccttccagacacctcagcaggtcacagttcggtgtgag
accagcaaccaagaggggctcatcagcaggcgggacatcaaactggtattcagctccctt
ttctcccaggtggcagtgttggctgctgttttagccttagtggtcattgttatcatgtct
ttcatcatcctcgttgcaatctggaggaagaaacctcgctatgagatcagatggaaggtg
atagaatctgtcagccaggatggacatgagtatatctacgtggatcccatccacctgccc
tatgacctggcctgggaaatgcgtcgtgaccacctagtgctgggtcgcactcttggatca
ggagcgtttggcagggtggtcgaggcaactgcatatggtctcacagattcgcagtccagc
acaaaggtggcagtgaaaatgctgaaatctacagcgagaaggagcgaaactcaggccctg
atgtcagagttaaagatcatgagtcacctgggtcctcacctcaacatcgtgaacttgcta
ggggcttgtaccaaacatggccctctgtacctggtgactgagtactgtcgctatggcgac
ctggtggattacctgcacaggaacaagcacacgttcctgcagtactatgctgagaaaaac
caggactacagctgtctcatctccagaggaagcacccctctcagccagaggaaaggctat
gtgtctttcggaagtgagagtgatggaggatacatggacatgagcaaagatgagccctca
gtctacgttcccatgcaagagcagatagattccatcaaatatgcagatatccagccttct
ccgtacgagtctctctaccaacacggcttctaccaggaacaaggaggcaacagtttagac
ctggtgatcagcgactctcccagtctcacctacgaagatcttttaggattcagctaccaa
gtggcaaaggggatggagttcctcgcctctaagaactgcgtccatcgtgacctggctgcc
aggaacgtcctgatctgtgagggcaagctggtgaagatttgtgacttcggcctggccaga
gacatcatgcatgactccaactacatctccaaaggcagcactttccttcccttgaagtgg
atggcacctgaaagcattttccataatttgtataccaccctaagcgatgtgtggtcatat
ggcattcttctttgggagattttcacactgggagggaccccctaccctgatttgcccatg
aatgaattattctacagtgctttgaagggaggctaccgaatggccaaacccacccatgcc
tccgatgaagtttatgagattatgaagaaatgctgggatgaaaagtttgagaaaaggccc
gagttctcatttctggtccacagcgtggggaatatgctgacagacagttataaaaagaaa
tacaaccaagtcaatgaaaacttcatgaagagtgaccacccggcagtcgcccgcaccaaa
cctcggctgacctcaccctttccagtcgccaacccagcatttggcaccccatctcctgtc
acactccaatctccactggatgcctacaaccaaaactcaaggcctagacaagacttcaga
caagaggcacaggaagtcataccgtcatacaacgagtacatcattcccattccggacccc
aagccagaagacgctttcactgacatgccgtcggaaagtcctggaagctctgtgggtctg
ggggcggagaccgactccatgtctcaggacactgctgacacccttccagaggaggaccgg
ctggaagagaccagcgagagagacgctctgttgggctcctccgggacacccgaggtagaa
gacagcttcctgtag
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integrated database retrieval system
