Oreochromis aureus (blue tilapia): 116330964
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Entry
116330964 CDS
T07295
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116330964 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116330964 (eftud2)
Spliceosome [BR:
oau03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
116330964 (eftud2)
Complex C
U5 SnRNP specific factors
116330964 (eftud2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
116330964
NCBI-ProteinID:
XP_031609309
Ensembl:
ENSOABG00000008175
LinkDB
All DBs
Position
LG4
Genome browser
AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSEDDDDDLDAEDRDVDEGDEDDEDEPADADDDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKNKQFTLMEQELPATVYDMEFLAD
LMDGPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRLSDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLILELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHIPSPQEGARNKIEHTYTGGLDSDLGEVMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQISWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatttgtatgacgagtttgggaactacatcggtccagagctggactctgaa
gacgatgatgatgacctggatgcagaggacagagacgtcgacgagggtgatgaagatgac
gaggatgagccagcggatgctgatgatgatgtccctggcatggaggtggtcctgcatgag
gacaagaagtactatcctacagcagaggaggtctatgggcctgaagtggaaactattgta
caggaggaagatacacaaccacttacagagccgatcatcaagcctgtgaagaacaagcag
ttcaccctgatggaacaggagttgcctgccacagtttacgatatggaatttcttgcagat
ctgatggacgggccagagctgattcgtaacgtcaccctctgcggtcaccttcaccacggc
aagacctgttttgtggattgcctgattgagcagacacacccagaaatcaggaagagagat
gatgtggatctccgatacacagacatcctctttaccgaacaagagagaggagttggcatc
aaaagtacccctgtcacaatggtcctgcctgactccagaggaaaatcctaccttttcaat
ataatggatacaccaggccacgtgaatttctctgatgaggtcacatctagcatccgcctc
tcagatggcgttgtcctcttcatagatgcagcagaaggagtgatgctgaacacagagcgt
ctcatcaagcatgcggttcaggagcgaatggcaatcaccatctgcatcaacaaggttgat
cgtctcattctggagctcaaactgccgcccacagatgcttattataaacttcgccacatt
gtagatgaggtcaatggtttgctgagcacatattccacagatgagaacttggtggtgtct
cctctccttggaaatgtctgcttcgccagctctcagtacagcatctgtttcaccctgggg
tcctttgcaaagatctactcagatacctatggtgacatcaactataatgagtttgccaag
aggctctggggagatatttatttcaaccccaaaactcgcaagttcacgaaaaaagctccc
agtagtaactcccagcgcagctttgtggaatttgttctggagcctctgtacaagatcctc
tcacaggtggttggggatgtggacacgtctctccctcgagttttggatgagctgggtatc
caccttactaaggaggagctgaagctgaacattagacccctgctgaggctcgtctgtaat
cgcttctttggagagttcactggctttgtagacatgtgcgtgcaacacattccttcacca
caagagggtgctaggaacaagattgagcacacctacaccggaggtctcgactcagacttg
ggggaagtcatggcagagtgtgatcctgatggtcctctgatgtgccacaccactaagatg
tacagcacagaggatggtgttcagttccatgctttcgggcgggtgctgagcgggaccatt
caggcaggtcagcccgtcaaggtcttgggagagaactacacacttgaagatgaggaggac
tctcaggtctgcactgtggggcgtctctggatttctgtggccaggtatcagattgaagtg
aatcgagtgcccgccggcaactgggttctcattgagggctgtgaccagccgatcgtcaag
accgccacaatcacagagcccagagggaacgaagaggctcagatttttaggccgttgaag
ttcaacacagcatcagtcatcaagatcgcagtggagcctgtgaatccatcagagctgccc
aaaatgctcgacggactaaggaaggtcaacaagagctatccttctctcaccacaaaggtg
gaggagtctggagagcatgtcatcttggggacaggagagctttacttggactgcgtcatg
cacgacttgaggaagatgtactctgaaatcgacattaaagttgccgaccctgttgtgact
ttctgtgaaacagttgtggagacatcgtccctgaagtgctttgctgagacgcctaataaa
aagaataagatcaccatgattgctgagcccttggagaaggggctggccgaggacatcgaa
aatgaagtagtgcagatatcttggaacaggaagaagctgggagagtttttccagaccaag
tacgactgggatttgctggctgccagatctatttgggccttcggaccagacactacagga
ccaaacattcttgtagatgacacactgccttctgaggtggacaaagcactgcttggttca
gtcaaagacagcattgtgcagggcttccagtggggcaccagggaaggacctctgtgtgat
gaacccatcagaaatgtcaagttcaagatcctggacgcagtcatcgctcaggagcctctc
cacagaggaggaggtcaggtcatcccaacagcaaggagagtggtgtactctgctttcctc
atggccactccgaggttgatggagccatattactttgtagaggttcaggctccagctgat
tgtgtgtctgcagtttacacagtgctggctcgaaggaggggtcacgtcacccaggatgca
ccaattccaggctctcctctctacacaattaaggctttcatcccagccattgactcgttt
ggctttgagacagaccttcgcacacacacacagggtcaggcctttgctctgtctgtgttc
caccactggcagattgtgcccggtgaccctctagataagagcattgtgatcaggcctctc
gagcctcagcctgccccccatctagccagagagttcatgatcaagacccgaagacgcaaa
ggtctgagcgaggatgtgagcatcagcaagttcttcgacgaccctatgttgttggagctg
gccaaacaagacgtggtgctcaactatcccatgtga
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