KEGG   Opitutales bacterium ASA1: ASA1KI_31870
Entry
ASA1KI_31870      CDS       T10563                                 
Symbol
ligA_2
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
oba  Opitutales bacterium ASA1
Pathway
oba03030  DNA replication
oba03410  Base excision repair
oba03420  Nucleotide excision repair
oba03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:oba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ASA1KI_31870 (ligA_2)
   03410 Base excision repair
    ASA1KI_31870 (ligA_2)
   03420 Nucleotide excision repair
    ASA1KI_31870 (ligA_2)
   03430 Mismatch repair
    ASA1KI_31870 (ligA_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oba03032]
    ASA1KI_31870 (ligA_2)
   03400 DNA repair and recombination proteins [BR:oba03400]
    ASA1KI_31870 (ligA_2)
Enzymes [BR:oba01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     ASA1KI_31870 (ligA_2)
DNA replication proteins [BR:oba03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ASA1KI_31870 (ligA_2)
DNA repair and recombination proteins [BR:oba03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     ASA1KI_31870 (ligA_2)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ASA1KI_31870 (ligA_2)
   MMR (mismatch excision repair)
    DNA ligase
     ASA1KI_31870 (ligA_2)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      ASA1KI_31870 (ligA_2)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 HHH_5 Nlig-Ia PTCB-BRCT MacB_PCD RNA_ligase DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: BET68269
LinkDB
Position
complement(3991323..3993464)
AA seq 713 aa
MARATSLRVVFCLFASWLLVCGLRAEETATTKREGESRIEFLRTEIARHDELYHRHASPE
IGDAEYDALKRELHALLAAYPEFGDRERTPVFDDRDGRFATARHAVPMRSLAKTYEEEGL
RRFHRAVVERAGRANVRFVVEPKMDGIAISAVYEHGRLVRVVTRGNGEEGDDVTRNASAI
ASLRAELRADFGGSAMPERIELRGEVFMDWAEFERINRTEAREGTAGTFAHPRNLAVGSL
KASDDSTTRERTLDVVFFGWGEWTPQDSAPATQDEFRNRVRAWGLPVPEPIVFAEDEDGL
VRAVLQAGEVRRGLAFPTDGVVVKLDRVDARETLGEGSEGPRWAVAYKFPADEAATTLRD
VRWQVGRSGAVTPVAEFDPVVVAGANVARASLYNPAWFARLGLHVGDTIRVARAGEIIPV
VVGVDASRRLPGADAFTVPTACPSCAAVLSNTMGGNAIRCVARACPARVARSVEHFASDA
CLDIDGLGTATIERLVSAGLVRSPADLYALRIEDLETMGGLGANAARALVLSIERTRSAE
AWRWLQGLGIPRVGATNARRLATLFPEPTELLHAITDEAVGAVLGSQLGAATAIEVRAWF
EDAENREVFERLFAQRMGRPSSEVSDGPLAGLVFVFSGQLAGATRKEASARVKALGGETS
GEVSRRTSHLVVGARPGASLRKAESLGMTILDEAAFERLLEAASTSATALDAP
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggcgcgcgcaacttcgctccgggttgttttctgtctgttcgcgtcttggctgcttgtc
tgtgggctgcgcgccgaggagacagcgacgaccaaacgcgagggagagtcgcggatcgag
ttcctacggacggagatcgcacggcacgatgagctctaccaccgacacgcgtcacccgag
atcggtgatgcggagtacgacgcactgaagcgcgaactgcatgcactcctcgcggcgtat
ccggaattcggtgacagggaacgcacgcccgtgttcgacgatcgcgacggacgattcgcg
accgcgcgccacgccgtgccgatgcgcagcctcgcgaaaacgtacgaggaggagggcttg
cgacgttttcatcgagccgtggtcgagcgcgcgggccgcgcgaacgtccgtttcgtggtc
gagccgaagatggacggcattgcgatcagcgcggtctacgagcacggcaggctcgtgcgt
gtcgtcactcgaggcaacggagaggagggcgacgacgtgacgcgcaacgccagcgcgatc
gcttcgcttcgggccgagttgcgagcggacttcggaggaagtgcgatgcccgagcgcatc
gagttgcgcggtgaagtcttcatggattgggcggagttcgaacggatcaatcgcacggaa
gcgcgcgaaggtaccgcaggcacgtttgcgcatccgcgcaacctcgcggtcggcagcctc
aaggcctccgacgattcgacgacgcgtgagcgcacgctcgatgtcgtcttcttcggttgg
ggcgagtggacgccgcaggactcggccccggcgacacaggacgagtttcggaaccgcgtg
cgcgcttgggggctgccggtgccggaaccgatcgtgttcgcggaggacgaggacggtctc
gtccgtgcagtgcttcaggcgggcgaggtacggcgcggtctggcgtttccgaccgatggc
gtggtcgtgaagctcgatcgtgtcgatgcgcgcgagaccctgggtgaaggatcggaggga
ccgcgttgggcggtggcgtacaagttccctgcggacgaagccgcgacgactctgcgcgac
gtccgctggcaagtcgggcggagcggagccgtcacgccggtcgcggagttcgatccggtc
gtcgtggcgggagcgaacgtcgcgcgggcgtcgctgtacaatccggcgtggttcgctcgc
ctcggcttgcacgtcggcgacacgatccgcgtggcgcgcgccggggagatcatcccggtg
gtcgtcggcgtcgacgcgagccgtcgtctaccgggtgccgacgcgttcacggtgcccacg
gcgtgtccgtcgtgtgcggcagtcttgtcgaacacgatgggcggaaacgcgattcgctgc
gtggcgcgggcgtgccctgcgcgcgtggcgcgcagcgtggagcacttcgcatccgatgcg
tgtctcgacatcgatggactcgggacggcgacgatcgagcggctcgtgagtgccgggttg
gtacgatcgccggccgatctctacgcgctgcgtatcgaagatctggagacgatgggcggc
ctcggcgcgaacgcggcacgcgccctcgtactctcgatcgagcgaacccggtcggccgaa
gcgtggaggtggctgcaagggctcgggatcccgcgcgtcggagcgacgaacgctcgtcgg
ttggcgacgctgtttccggaaccgacggagttgttgcacgccatcaccgacgaggcggtc
ggagcggtgctcgggtcgcaactgggcgcggccacggcgatcgaggtgcgggcgtggttc
gaggatgctgagaaccgggaggtgttcgagcggttgttcgcccagcgtatggggcgcccg
tcttcggaggtgtccgacgggccgctcgccggactcgtattcgttttctcgggacagctc
gctggggcgacgcgcaaagaggcttcggctcgggtaaaggccttgggcggcgagacttcg
ggagaagtgagtcgcaggacgagtcatctcgtggtcggtgcgcggccgggagcttcgttg
cgaaaggcggagtcgctcggcatgacgatcttggacgaagccgccttcgaacgcttgctc
gaagcagcgtcgacgtccgccacggcgctcgacgctccttga

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