Octopus bimaculoides (California two-spot octopus): 106869626
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Entry
106869626 CDS
T04127
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obi03036
]
106869626
03400 DNA repair and recombination proteins [BR:
obi03400
]
106869626
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106869626
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
106869626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
Ig_SMCHD1_1st
Ig_SMCHD1_8th
Ig_SMCHD1_4th
Ig_SMCHD1_6th
Ig_SMCHD1_2nd
Ig_SMCHD1_5th
Ig_SMCHD1_7th
HATPase_c_3
SMC_hinge
HATPase_c
Motif
Other DBs
NCBI-GeneID:
106869626
NCBI-ProteinID:
XP_014770922
UniProt:
A0A0L8HN42
LinkDB
All DBs
Position
3:complement(60666992..60743573)
Genome browser
AA seq
2065 aa
AA seq
DB search
MASSMNASNDDDDAFVYIFDRRNGASPEIKLHTGGLFTFEDFKVKVKQELKSDNDDFVIA
STNRDGICDDSSWDSVEKGDTLYILNTLLQELCAPAQQRVNFLPHYDTIVKGGMYEYYAS
EGQNPLPYAFAELIDNALTATANNNADRNIEIRLHFDEGNPNRNCIFVLDNGKGMTPRQL
NNWAIYRLSKFIRKDKRRRNSVDRDDNSAVRYEPPRSLNSDISYFGVGGKQAIFYIGNAT
KMITRPAGSKDIHELTISKDDFEKKEKNNESIYSGFIRNRKPSDSSHVAPEDEIFRKIIT
EEEYRESFTVVAITGINSGHIPYLKHNLREWCRQLAHIYHYYLHGPNGNQDPPAHDPNRV
MRPASPFRHINIEIKLFKGLVLMKNLNLRDINDDLQSQFVKTGASVFDFKAKVEGAGVVE
GVLRYHPFLYDHETFPTDFIDPRYSEPEDDHDYAINDRPARGRRPVFECYWNGRLIPYTL
IEEFDWCSAPKKSKVVPADCYNRVSGVLWTNDKFQVSTNKLTFIDLEMKLKEKSTVFCRI
INGHEKRTGIDKEFVNWLKECHEKFDKQIHFSEFKGHALRPDLPKHRQTPWSVYEQVEWD
GKIFKKGNLVRISRTVPTILGTIKCFLLYGDHEGEVYATGGDIQLIQEPRCLYNEVKVQP
LFKLDRLATPHQVKKAIEEEEAKLPDQLVVSWPDDNEVVEGERRPAGKTIGDIKVEIINK
KGETIKQLPGTAPAHKKLLVELKIIWHSSNGDEVIVSHISQHGKNWPYWFRKMENIKNLG
HHTLQLQVVLNESGATTFAGKDLPSHRIKFFVTEAEPKKFTVALLDGPFRVGVPFQIPLE
FQDEFNHITAPNSDCKPTLEASGLDISYDSLQVKGNHLLIKGISAKGLVNCTTGKNFNLT
VKVDELEEKQTLKIRLLPGPPYQLSVKPDQNLNLENGTAPVFNVEVLDIAGNVTTENKLV
VTCKFQGISGLPVYSLDCSSSGTGILTGESLYMKKVKSNQEVVAKIELQNSKDVKTVERK
LCLIPSGKTASIDLSYNLYNEDGTVEKTVRIKNSQEVVAVAGEYMQGLTFLLLDEAGREI
KMDEKISSKIKVNWTPKMNKELLLQKKLPDIKIPTSISDQKYCHVSILDGSDTHFSFTIK
AKAGEPSQMKCKVKGSCSLRIKEQMESEIQVSIRDKNGNEIIDFQASELQELNISGDGLI
TDKIQKYKGQQCAFCVKGIQLEDVHTGSKELMFQWKKLKDYIRIELVSGPPSQLIIPGWD
LDEPIVVYDGGKINQHLVVSLCDDRGNQCKEKDVKILLNKDQKIKIVPSATTLKTDNEGQ
VDFGTFSVNGPKGVYELSVKALLGGSRTIAGPRIKISIRPDPTKPLRLEVDCKSNIAVEA
GSKLPVYTVKVLAEDGNPLTLAKHSHLSMKQWPSDSSHQSIPPPKAISYAPDNVNNEKGI
FTFSNKRCPELAGKFSIMFVYYDGKYNVDSEVISLTVLPSVPTKLVPLETLGTPTVSNSK
NNTSRCLIESLLLELRDQFDNPVEPKFDGSVKIVVKALDEVDEIPAFVGPSKQLLVPLLK
GRALLQKITLQENTPGKDGFEYVLSCTVSAQNIKEKIEPLEIPFLFYNDCKKQSRMASLS
KERDTIQIAIRAYKSMFETTEQLINELKISNHEASHLEQQLRMELKKQNIPLAQLQSIEQ
IDILLQTRMTERDELLSRPRRLCGLAQTPSDPEILGKIGQLAELQDHDIARVLSWHMSAD
MDCVVTTTTKKAKEIYNQTSGKQQVLPLDSIYKKTLPEWDKPLPHEKFRPQWKPPGNPVY
ARKLLKFSHQEEKCKLVFGMLLGDTMFLDSLDYANSYRQEVVKFAHCPTILTRDGDRIRS
NGKFGGLMNKALPLDKLRGAVFGEPLPVAYHAICTQIDTLHNYRAAVKKRQNSETDLLEQ
QRAMNNPEMKMKMKECSEAEERLRVIEQKLGMCLAQSQSSAMTSKGKLYEQYETPVSTKK
PRLSTSSIPYSVDTGNVEMSSPALNGTGAGKSHNIMNNSGMASNSGAVGVSTPTNNNFAP
TRQSKRIASMTPVTSDDGRKRLRKT
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtctatgaatgcctccaacgacgatgacgacgcttttgtctacattttcgac
agaagaaatggagcttcgccagaaattaaactgcatacgggtggattgttcactttcgaa
gacttcaaagttaaagtgaaacaggagcttaaatctgataatgatgattttgtaattgca
tccacaaacagagatggaatttgtgatgactcttcttgggatagcgttgagaagggggac
actctctacatactcaacactcttctgcaagagttgtgtgcccctgcacagcaaagggtc
aatttcctcccacattatgacactattgttaaaggtggcatgtatgaatattatgcttca
gaaggccagaatcctttaccttatgcatttgctgagttgatcgacaatgccttaacagca
acagcaaataacaatgctgaccgtaacatcgaaatcagattgcattttgatgaagggaat
ccaaatcgaaactgtatctttgtccttgataatggcaaaggtatgacacctcggcaactt
aacaactgggctatctacagactttcaaagtttataagaaaggataaacggcgcagaaat
tcagttgatcgagatgataacagtgcagtaagatatgaaccaccgaggtctttaaacagt
gacatatcctattttggagttggtggcaaacaggctatcttttatataggaaatgctact
aaaatgataactcgaccagctggttcaaaagatattcatgaattaactatatcaaaagat
gattttgaaaagaaagagaaaaataatgagtcaatttacagtggtttcattagaaacaga
aaacctagtgactctagccacgttgctccagaagatgaaattttcagaaaaattattact
gaagaagaataccgtgaaagttttacagtggttgccattactggtatcaattcaggtcac
attccatatctaaaacacaatctgagggagtggtgtcggcaattagctcacatttaccat
tattatctacacggccccaatggcaaccaagatcctccagcccatgatcctaacagagta
atgcgaccagctagtccattcagacatatcaacattgaaatcaaattattcaaggggttg
gtgctgatgaaaaacttgaaccttcgcgatattaacgatgaccttcagagtcagtttgtc
aagacaggagcttcagtatttgatttcaaagctaaagtagagggtgccggagtggttgaa
ggagtcctcagatatcatccatttttatatgaccatgaaacattccccacagactttatt
gatcccagatattcagaacccgaagacgaccatgattatgctatcaatgaccggccagca
cgtggaagacgccctgtatttgaatgctactggaatggtagattaattccttatacactt
attgaagaattcgattggtgtagtgctccaaaaaagtcaaaagttgtcccagcagattgc
tataacagagtttctggtgtgttgtggactaacgacaaattccaagtcagtactaacaaa
ctgactttcattgatttggagatgaagctcaaggaaaaaagtactgttttctgtcgaatt
attaatggccatgaaaagcgaactggtattgacaaggaatttgttaattggcttaaagaa
tgtcatgaaaaatttgacaaacaaattcacttttcagaatttaaaggtcatgctctccgg
cctgatctccccaaacatagacaaactccttggtctgtttatgaacaagttgaatgggat
gggaaaatatttaaaaagggcaacttggttagaatcagtcgcactgttcctacaattctt
ggtaccattaaatgctttttattgtatggagaccatgagggagaagtgtatgcaactggt
ggcgacattcaactcatacaggaaccacgttgcttgtataatgaagtaaaagtccaacct
ctgtttaaattagatcgtttggccacacctcatcaagttaaaaaagcaattgaagaagaa
gaagccaagttacctgatcaattagttgtttcttggcctgatgacaatgaagttgtagaa
ggtgaacgcagacctgcagggaaaaccattggtgatattaaggtagaaattataaacaaa
aaaggtgaaaccatcaagcagttacctggaactgccccagcacacaagaaattgttagtg
gaactcaagattatctggcattcttccaatggtgatgaagtgattgtatcacatattagt
caacatggaaaaaactggccatattggttcagaaaaatggaaaacatcaaaaacttaggg
catcacacacttcagctccaagttgttttgaatgagagtggtgcaacaacttttgctgga
aaagatctgccgtcgcaccgtatcaaattttttgtcactgaagctgaacccaaaaagttt
acagttgctttactggatggaccctttcgtgttggggttccatttcaaattcctcttgaa
ttccaagatgaattcaaccacataacagcaccaaacagtgattgcaaacctactcttgag
gctagtggactggatattagttacgatagtttacaagtgaaaggtaaccatctgttgatt
aagggtatttctgcaaaaggcctggttaattgtactacaggaaagaatttcaatttgacc
gtgaaagtggatgagttagaagaaaaacaaaccttaaaaatccgtttacttcctggtcct
ccctatcagctctctgtgaaaccagatcaaaacttgaaccttgaaaatggaactgctcct
gtgttcaatgtagaagttctagatattgcaggcaatgttactactgagaataaactggtg
gttacttgtaagttccaaggaatctctggtttaccagtttatagtcttgactgttcaagt
agtggcactggaatattgactggagaatcattatacatgaaaaaagtgaaaagtaaccag
gaagttgtggccaaaattgaactgcagaatagcaaagacgtgaaaacagtggaacggaag
ttatgtttgataccaagtggaaagactgcaagcattgatttgagttataatttgtacaat
gaagatggcactgtggagaagacagtacgcattaaaaactctcaggaagtagttgctgtt
gcaggtgaatacatgcagggtttaacattcttacttcttgatgaagctggtcgggaaatc
aagatggatgaaaagatctcctccaagataaaggtaaactggacccctaaaatgaataaa
gaacttctacttcaaaaaaaattgcccgatatcaaaattccaacttcaatttctgaccaa
aagtattgccatgttagtattctagatggatcggacactcactttagtttcacaataaaa
gccaaagcaggagagccttctcagatgaagtgcaaggtaaaaggaagttgcagtttacgt
attaaggagcaaatggaaagtgaaattcaagttagcatcagagataaaaatggcaatgaa
ataatagatttccaagcttcagaactacaagaactgaacattagtggtgatggcttaata
actgacaaaatccagaagtataaaggtcagcaatgtgccttctgtgtaaaaggcatccag
ttagaggatgttcacactggttccaaagagttgatgtttcaatggaagaaactcaaggat
tacattcgcattgagttggtatcagggcccccttctcagcttattattccaggatgggac
ttggacgagcctattgtggtgtatgatggtggaaaaattaatcaacatttagttgtatcg
ctgtgtgatgacaggggcaaccaatgtaaagagaaagatgtaaaaatccttttgaataag
gatcaaaaaattaagattgtgccttctgctactacattgaaaaccgataatgaaggacaa
gtagactttggaaccttctctgtcaatgggccaaagggtgtctatgaattgtcagtgaaa
gctctgcttggagggagtagaaccatcgcagggccaagaattaagatcagcattcgacca
gatccaaccaaacctttacgtcttgaggtggattgtaaaagtaatatagcagtagaagct
ggctcaaagttgcctgtatacacagtgaaagtattggctgaagatggtaatccattaact
ttggcaaagcattcacatctgtcaatgaaacaatggccttcagattctagtcaccagtca
ataccacctcccaaagcaatttcatatgcacctgacaacgtgaacaatgagaaaggaatc
tttactttcagcaacaaacgctgtccagagttggctggcaagttcagtattatgtttgta
tattatgatgggaaatataatgtagatagtgaagtgatctcacttactgtgctccccagt
gtgccaaccaagttagtgccattagagacactagggactcccacagtgagcaattccaag
aataataccagtcgttgcctaattgaatctcttcttcttgagctcagggaccagtttgat
aatccagtagagccaaaatttgatgggtcggtcaaaatagttgttaaagccctagatgag
gtggatgaaatacctgcttttgtagggccttcaaaacagcttttggttccattactcaaa
gggcgagcccttttacagaaaattaccttacaagaaaatacaccaggaaaagatggtttt
gagtatgttttatcctgcacagtctctgcacagaacattaaagaaaagatcgaaccatta
gagattcctttcttgttctataatgattgcaagaagcaatctcgtatggccagtctctct
aaagaaagagacaccattcaaattgctatcagagcctacaaatcaatgtttgaaacaaca
gaacagcttataaatgaattaaaaatctcaaaccatgaagccagccacttagaacagcag
ctacgcatggagttgaagaagcaaaacattccgctcgcacaacttcagtcaattgaacaa
attgatattcttcttcagacaagaatgacagaacgagatgaactgctcagcaggccacgc
cgactctgtggtcttgcacaaacacctagtgatcctgagatattgggaaaaatcggtcag
cttgcagaacttcaagaccatgatatagctcgtgtcctctcatggcacatgtcagctgat
atggactgtgttgtaactacaactactaaaaaggccaaagaaatctacaaccaaactagt
ggcaaacagcaagtgttaccattagattctatttataagaaaacccttccagaatgggac
aaacctctacctcatgaaaaattccgacctcaatggaaacctcctgggaatccagtctat
gcaaggaaacttcttaaattcagtcaccaagaagaaaaatgtaaattggtgtttggaatg
ctgttgggtgatacaatgttcttggattctttagactatgcgaattcctacagacaagag
gttgtgaagtttgcccattgcccaaccattttgacaagagatggagatcgtatccgcagt
aatggcaaatttggaggattaatgaacaaagcattgcctttagataagctacgtggagca
gtgtttggtgaacccctaccagttgcttatcatgcaatctgcacacaaattgacacactc
cataactaccgggctgctgtgaagaaacgccagaactctgaaactgatttacttgaacag
caaagagcaatgaacaatcctgagatgaagatgaaaatgaaggaatgttctgaagcagaa
gaaagactacgagtcattgaacagaaattaggtatgtgccttgctcagtcacaatcgtca
gcaatgacttcaaaaggaaaattatatgaacaatatgagactccagtgagcaccaaaaaa
cctcgtttgtcaacatcctcaattccttacagtgttgatactggtaatgttgaaatgtca
tctcctgctttgaatggcactggagctggtaaatcccacaatattatgaataatagtgga
atggcaagcaactcaggggcagtgggtgtctcaacaccaaccaacaacaattttgctcct
acgcgacagagtaaacgcattgcttccatgacaccagtcacttcagatgatggtagaaag
aggttgcgtaaaacttga
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integrated database retrieval system
