Octopus bimaculoides (California two-spot octopus): 106881589
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Entry
106881589 CDS
T04127
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi02010
ABC transporters
obi04146
Peroxisome
obi04977
Vitamin digestion and absorption
obi04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106881589
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
106881589
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
106881589
04980 Cobalamin transport and metabolism
106881589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106881589
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
obi02000
]
106881589
Enzymes [BR:
obi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
106881589
Membrane trafficking [BR:
obi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
106881589
Transporters [BR:
obi02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
106881589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_29
AAA_16
DUF815
nSTAND1
RsgA_GTPase
NACHT
AAA_5
MCM
AAA_22
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
106881589
NCBI-ProteinID:
XP_014787530
UniProt:
A0A0L8FRU1
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All DBs
Position
11:complement(42021987..42122750)
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AA seq
613 aa
AA seq
DB search
MDHTQNNTQKLQFDLLFVKRFLKLFTFMFPSFLSLPTLLCTFLLLLSMLEQFIIYKLGLI
PSQYYKILGNKDAVSFKSITIRALLIIVTEAFISSTLRYTVSMLHIQWREHLTLTFHKEY
FKDVLYYYVNMFSRDIDNPDQRIAEDINNMCDTFSQIFAPIILAPFIIGYYVHQTIVISG
YIGPLVVFGFFLVFSFINRFIMSSVVYYVYKKEKLEGDFRFKHMQIRVNSEPMAFYQSGA
TEYLKSNSILFELLRSQYRVAQKNYLLNFFVKMSDYIGIILNYIILAIPIFAGFYNDLSA
AELSSVISKNAFIIIYLINNFTRLIDLSVNAAMTAGLAHRVGLLFETLLQLKNSEKPLIT
TYANSTERRFINDCSFYRSSLTEDSFSCSNVAFKVQNVSYNIPRSNVILCKNLTFQLQIG
TNVLLTGESGCGKSSLLRVISGLWPHASGTISCPHYLGSDGIMFLPQKPYLTNGSLLQQI
IYPEYEKTFIHDSITTERIFNYLDRVQLNDLVSCVGRLDAKVEWNWYNELSPGQQQRLCF
VRLFYHKPKFAVLDESTNQISPESEEIMYSMCKELGITVLSVGHRQSLTKYHQMLLHIEG
DGNWTMKPIINSS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggatcatactcagaacaatacacaaaagctccagtttgatcttctgtttgtgaaaagg
tttctcaaactgttcacctttatgtttccatcattcctcagcctcccaacattactctgc
acctttctgttattgctgtccatgttagaacaatttatcatttataaactcgggttaata
ccaagtcagtattataagatcttgggaaacaaagatgctgtgagttttaaaagcattaca
atccgagctctccttattattgtcacggaagcttttataagtagcacacttcgttacact
gtctccatgttacatatacaatggcgtgaacatttgacattgactttccataaagaatat
ttcaaagatgtgctttactactatgtcaatatgttcagtagagacattgataatccagac
caacgtatagctgaggacataaataacatgtgtgatactttcagccaaatatttgcacca
attatccttgctcctttcattattggttattatgtccatcaaactattgtaataagtggt
tatattggtcctttggtagtgtttggatttttccttgtttttagcttcatcaaccgtttt
atcatgtctagcgtggtgtattacgtgtataaaaaagaaaaactcgaaggagattttagg
tttaaacacatgcagataagagtcaattctgaaccaatggccttttaccaatcaggtgca
actgaatatttaaaatcaaacagtatattatttgagctcttacgaagtcagtacagagtt
gcacagaagaattatttactcaatttttttgtcaagatgtcggactatattggtataata
ctaaattatatcattcttgccattccaatatttgctggtttctataatgacttgtctgct
gcagaattatcttcagtcataagtaagaatgccttcattataatatatttaataaacaac
ttcaccagactaattgatttgtctgtgaatgctgctatgacagctggtcttgctcaccgt
gttggactgctgtttgaaactttgcttcaactgaagaacagtgagaaacccttgataacc
acgtatgccaattcaacagagagaagatttataaatgactgttctttttatagatcttcc
cttacagaagattccttcagttgctcaaatgttgctttcaaagtacagaatgtttcatac
aacatacctagatctaatgtgattctttgtaaaaacttgacctttcaactccaaatcgga
acaaatgtattattaactggtgaaagtggatgtggtaaaagctccttgttacgagtaatc
agtggcttgtggccacatgcatcaggaactatcagttgtccccattaccttggttctgat
ggaattatgttcttgccacaaaaaccatatcttaccaatgggagtttattacaacaaatt
atttaccctgaatatgaaaaaacttttatacatgatagtattacaactgaaaggatattt
aattatttagacagagtccaactcaatgatttggtttcttgtgttggccgtcttgatgcc
aaggtagaatggaattggtacaatgaattatcacctggacaacagcagcgactttgtttt
gttagattattctatcataaacccaaatttgcagttcttgatgaatctacaaatcaaata
agtcctgagtccgaagagattatgtattccatgtgcaaagagttgggtattacagtcctc
agtgttggacatagacagagtttaacaaaatatcaccaaatgctacttcatatagaaggt
gatggtaactggactatgaaacctataataaattctagttga
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