KEGG   Ooceraea biroi (clonal raider ant): 105276098
Entry
105276098         CDS       T05778                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03018  RNA degradation
obo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105276098
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105276098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obo03019]
    105276098
   03041 Spliceosome [BR:obo03041]
    105276098
Messenger RNA biogenesis [BR:obo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105276098
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     105276098
Spliceosome [BR:obo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    105276098
 Complex C
  U2 snRNP components
    105276098
SSDB
Motif
Pfam: LSM TIG_SUH HMMR_N
Other DBs
NCBI-GeneID: 105276098
NCBI-ProteinID: XP_011331746
LinkDB
Position
9:149896..150880
AA seq 98 aa
MAEEAEQLPPIDVKEPLDLIKLSLEERIYVKMRNDRELRGKLYAYDQHLNMVLGEVEEIV
TVVETDEETFEEVYRQKKRNIPMLFVRGDGVILVSSPT
NT seq 297 nt   +upstreamnt  +downstreamnt
atggctgaggaggcggaacagttaccaccgatagacgtgaaggagccgctggacctcata
aaactgagcttggaggagcgaatttacgtgaaaatgaggaacgatcgggaactacgaggg
aaattatacgcttatgatcagcacttgaatatggtgctgggtgaagtggaagagatcgtg
actgtggtggagaccgatgaggaaacgttcgaggaggtctatcgccagaagaagagaaac
attcccatgctgtttgtacgcggtgacggtgtgatcctggtgtcttcacccacgtaa

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