Ooceraea biroi (clonal raider ant): 105282847
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Entry
105282847 CDS
T05778
Name
(RefSeq) LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105282847
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
obo01007
]
105282847
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obo03016
]
105282847
Enzymes [BR:
obo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
105282847
Amino acid related enzymes [BR:
obo01007
]
Aminoacyl-tRNA synthetase
Class I (U)
105282847
Transfer RNA biogenesis [BR:
obo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
105282847
Prokaryotic type
Other AARSs
105282847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
Ubiquitin_IARS1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
105282847
NCBI-ProteinID:
XP_011343417
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All DBs
Position
7:10275466..10280187
Genome browser
AA seq
1282 aa
AA seq
DB search
MPRPPSEDSREMDEKLPETIDFAKEEEATLELWKKLDVFQNSLRLSRGRPRFSFYDGPPF
ATGLPHYGHILAGTIKDVVTRYAHQSGFYVERRFGWDTHGLPVEYEIDKALDIKGPDDVA
KMGIATYNAECRKIVMRYAEEWERIVGRMGRWIDFQNDYKTLYPWYMESIWWIFKQLYNK
GLVYQGIKVMPFSTACNTPLSNFESGQNYKDVVDPSVIVTFPLLDEPGVSLLAWTTTPWT
LPSNLAVCANPTFEYVEVKDNASNNVYIMLEAQLGLVFKSPDLYTVQGKRKGTDLKGKAY
EPLFPYFARYREKGAFRVLNDAYVTAETGTGIVHQAPYFGEDDYRCCLEAGIISRDQETV
CPIDSCGCFIEPVHDFVGKYIKEADKDIIKYLQGKQRLVVNSMMKHSYPFCWRSDTPLIY
KAVPSWFIRVEEIKEQLLLANSTTYWIPDYVKEKRFGNWLRDARDWAVSRNRYWGTPIPL
WISEDRQEIVCVGSIAELEQLTGATVTDIHRENIDHLAIPSKRPGRPPLRRVSEVFDCWF
ESGSMPYAQMHYPFERRKEFDEYFPADFIAEGIDQTRGWFYTLLVISTALFGKAPFKNLV
ANGLVLASDGQKMSKRKKNYPDPVEVINAYGADALRLYLINSPVVRAENLRFKKEGVRDV
IKDVLLPWFNAFRFLMQNIQRYEKEAGTQFVFDHTTSFCSKNIMDRWIISFTQTMLTFVR
KEMEAYRLYTVVPHLIKYIDNLTNWYVRMNRRRIKGENCNMKDCLMALNTLFSVVFAMVR
TNAPFTPFLTEFMFQRMSKRLAPTDENMDSVHYQLMPSPRKHLIDDTIENAVSKMQTVIE
LGXIIRDRKTIPTKYPLREIVIIHQEKKVLDEILLMQSYILEELNIKNLKVSTDKTKYGV
TMRAEPDHKALGARLKGEFKQVMQAIKELSNVQLQKFVTDKKIDVLGHTLNEEDLRLTYN
FTSSSAERSSQQYEAHGEGCVLVLLDISMTQEMIDEGLAREVINRVQKLRKKAQLVPADE
AIAYYDFDGPERNKKNLFDVCYEYRSAIETTTKTPLLSLAELPFGAPIIIEEMQKIKEVD
MKLVLAKPVKEAPQPDPWLDDNDDSHVLPICETFVNVKLEGIEPRFGATSREGTIQLHTM
VEGRLKNKRLLEEIELVFGLYGYAYDLYLGNKKLSIKADDNIIDDELANHTIKVVRAGAS
PPPLDATEETDYICDYIRLRRGTKYNKTQGRVLLENPKGNFSLSDGELERLICLHYDIPS
YPITEKCRKRRSLIRRPELFVA
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtccgccgtccgaagattctagagagatggacgagaagctaccggagacgatt
gattttgcgaaagaggaggaggcaacgctggaactctggaaaaagctcgacgtatttcaa
aatagtttgcgcttgtcgagaggtcggcccaggttctcgttctacgatggaccaccgttt
gccactggtctgccgcattacggtcacatactcgccggcaccataaaggacgttgttacg
aggtacgcgcatcaatccggtttctacgtggagcgccgattcggttgggacacccatgga
ttaccggtggaatacgagatcgataaggccctggacatcaagggacccgacgacgtcgcc
aaaatgggtatcgccacgtacaatgcggagtgtcgtaaaatcgtgatgcggtacgctgag
gaatgggagaggatcgtaggccggatgggtcgatggatcgactttcagaacgactacaaa
accttgtacccctggtacatggaatcaatctggtggatcttcaagcagctgtacaacaag
ggcctagtctaccagggcatcaaagtgatgccgttttccactgcctgtaatacgccgctg
tcgaactttgaatcaggtcagaattacaaggatgtcgttgatccatcggtaatcgttacc
ttcccattgctggatgagccaggtgtgtccctcttggcttggaccaccactccttggaca
ctgccaagtaacctggcagtgtgcgctaatcccacttttgagtacgtcgaggtaaaagac
aacgcttccaataatgtctatattatgctagaggcccagttggggcttgttttcaaatct
ccagatctgtacactgtacaaggtaaaagaaagggtacggatttgaaggggaaagcctac
gaacctttattcccatatttcgcgcgttacagagagaagggtgctttcagagtgttgaac
gatgcttacgtcacagctgagactggaactggcattgtccatcaggctccgtactttgga
gaggatgattatcggtgctgcttggaagccggcatcataagccgagatcaagagactgtt
tgtcccatcgacagctgcggctgtttcatcgagccggttcacgattttgtcggcaagtat
attaaggaggctgataaggatataattaagtatctccaaggcaaacaacggctggttgtc
aacagcatgatgaagcacagttatccgttttgctggaggtccgacacgccgctcatttac
aaagcggtgccctcatggttcatcagggtagaggagatcaaggagcagctcttgctggct
aacagcaccacgtactggataccggactacgtgaaagaaaaacggttcggcaactggctg
cgcgacgcgcgcgattgggccgttagcaggaatcgctactggggcacgcccataccgttg
tggatctccgaggacaggcaagaaatcgtgtgcgtaggtagtatcgcagaactggagcaa
ttaacgggcgcaacggtgacggacattcatcgcgagaacatcgatcatctggcgataccg
tcgaaacgcccgggacgtccaccgctacgtcgcgtgtccgaggtgttcgattgctggttc
gagtcgggctccatgccgtatgcgcagatgcactacccgtttgaacggcgaaaggaattc
gacgagtacttcccggcggacttcatcgccgagggcatcgatcagacgcgcggctggttc
tacacgcttctggtgatatccaccgcgctgtttggtaaggcaccgttcaagaacctcgtg
gcgaacggtctggttctcgcgtctgacgggcagaagatgtccaagcgcaagaagaactat
ccggatcccgttgaggtgatcaatgcgtacggcgcggacgctctgcgtctctatctgatc
aactcgccagtcgtgagagccgagaatttgagattcaagaaagaaggagtccgggatgtc
atcaaggacgtcctcttaccttggttcaacgcgtttcgattcctcatgcagaacatccag
cggtatgagaaggaagcgggcactcaattcgtcttcgaccatacgacgagcttttgctcg
aagaatataatggacaggtggattatatccttcacgcagacgatgttgacttttgtgagg
aaggagatggaggcttacaggctgtacacggtggtaccccatctgataaaatacatagac
aatctgacaaactggtacgtaagaatgaacaggagacgcattaagggagaaaattgtaac
atgaaagattgtctgatggcgttgaacacgttgttctcagtggttttcgccatggtgcgg
acgaacgcgccgttcacgccgtttctgacggagttcatgtttcaacgtatgtcgaaacgg
ctcgcgccaaccgacgagaacatggacagcgtccactaccaactaatgccatccccgcgc
aagcatttgatcgacgatactatagaaaacgctgtgtcgaaaatgcagaccgtcatcgaa
ctaggcngtatcatacgagatcggaagaccatacctacgaagtatcccctgcgagaaatc
gtaataatacatcaggagaaaaaggtgttggatgaaatcctgctgatgcaatcgtacata
cttgaggaactgaatatcaagaacttaaaagtcagcacggacaagacgaagtacggtgtg
actatgagagccgagccggaccacaaggcgctcggtgcccgcttgaagggcgagttcaag
caggtgatgcaagctattaaggagctgtccaatgtacaactccaaaaattcgtcactgac
aagaagatagacgtgctcggtcatacgctcaacgaggaggatctgcgcttgacgtacaac
ttcaccagctcgagtgctgaaagatcatcgcagcaatacgaggcccacggcgaggggtgc
gttctggtgcttctggacatctccatgacccaagagatgatcgatgagggtttggccagg
gaagtgatcaatcgtgtgcagaagctgcggaagaaggctcaattggtgcctgctgatgaa
gccatcgcgtactacgacttcgacggcccagagagaaacaaaaagaacttgttcgacgtc
tgctacgagtatcgttctgccattgagactacgacgaaaacgccgttactgtccctggca
gagttgccgtttggcgctcccataattatcgaggagatgcagaagatcaaggaggtagat
atgaaactcgtgttggctaaaccggtgaaagaagcgccccaaccggatccctggctagac
gacaacgacgattcgcacgtactgccgatctgcgagacctttgtcaatgtaaagcttgag
ggcatagaaccgagatttggcgcaacatcccgcgagggcacgatccaactgcacactatg
gtagaagggaggttgaagaataaacgcttgctagaggagatcgagttggtgtttggtctc
tacggttatgcttacgatttgtatctcggtaacaagaaactcagcataaaggctgacgat
aatataatagatgatgagctagccaaccatacgataaaagtggtgagagcaggagcgtca
ccgcctcccctggacgcgacggaagagacggactacatctgcgattatatcagattaagg
agaggcaccaagtacaataagacacaggggagagtactcttggaaaatcctaagggtaat
ttcagtttgagtgacggagaattagaacgactgatatgtttgcactacgatataccgagt
tatcctataacggaaaaatgtcgaaagcgtcgaagtctcataagaagacctgaactattt
gtggcctga
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