Ooceraea biroi (clonal raider ant): 105283233
Help
Entry
105283233 CDS
T05778
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04350
TGF-beta signaling pathway
obo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105283233
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105283233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
obo00536
]
105283233
Glycosaminoglycan binding proteins [BR:
obo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105283233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
EGF_CA
EGF
EGF_3
hEGF
Plasmod_Pvs28
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
105283233
NCBI-ProteinID:
XP_011344137
LinkDB
All DBs
Position
1:11374058..11393832
Genome browser
AA seq
1449 aa
AA seq
DB search
MSSLAVCLMLLSTVPAILGNCPLQALPWGALREERVLENGTLQLRYFCEPGRRLKGHKVA
TCTANGWDHPVPKCVLDSDKSNLQTTEKHFNVLANKKKNQKRLFVKAELNKTIVSQLDTT
CLIEGSIQKFIKAPSIEHAHEARYAKRTNVRLPYNQFHVAIYSCMEGFVFLNLKNDRLFC
SNGTWIGRHPKCVRKTEKVKHCAKHGKECQHVCEDTPTDIKCSCFDGFRAEGSSCIDIDE
CAEGTAKCTDICRNEPGTYHCECHHGFVLGNDRHSCQDVNECLSNNRHGPCQGICRNLKG
SYECSCADIPGYKLAADNHTCEDIDECMLGNVNCSHQCYNVPGSAFCLCPSGYYLEDDWK
TCLDINECQISNPCPNDTVCRNIVGSYKCVSKVRMEKVLRFEGTNVDEDRDDYEEIFTEE
PNLLRKNPWSTHHVCRKGFKLKSVNGTSKCVDINECKLWKRRCQHKCVNEPGTYHCTCHS
GYELKEDGRHCRDIDECTPGTHTCFHSCTNLVGSYECGCPPDTPLDKDCVPSNACEIANC
SHICDLGRASYRCDCPSGYVMQDDKKTCKDIDECLENNECYKCINTPGSYRCICPPGARL
AEDGFNCVYKLWDFAKSNCSLGLKYMSNGHCEDVDECLESEHGCSQLCINKYGSYRCDCE
IGWILKNDGFTCIKFNHCFNSTCSHSCISTSLSYKCECPLGYILNEDGNTCKDVDECENI
AMNDCSHDCINLKGSYSCSCPPGFKLGEDNRTCIVIIPYTCANSEGDDCTCPEGHTYLQE
EHICKDIDECQDESRHNCSHFCINTSGSYYCECPSDLHMLADFKTCRQWDSFCVNEVGCS
YSCKQDNDEVRCVCPTGYELIKYKKTCKDVNECDTGLHDCSHDCRNHDGGFTCHCPNYFI
LDKDNKTCLNMEHCIRSEFDCVRDCITFFDGYTHYCQCPYGYEPSSFDNTTCYKINYCDR
DHDCDHKCISEFDDFRCQCFSGYELWTRDNKTCINILECELNNPCSPHRCINLDGQFMCV
CSVGHPLTEDEETCEGYEDDCIQEDGGCSYLCAYTDMDFMCLCPNYEFADDDSTCKIDPC
YIDNGGCSHFCHYDGNVTCTCPVDMILIEDDRLCVHKKSCLVNNGGCSDICTFVNDTSIC
DCSVGYRLSLQDNTTCWDINECSELRDICNQICINTPGSFKCSCRDGYAQMPYAPEICID
VNECEVIENGGCSHICVNTPGSYHCDCPVGYRLSPQDKITCKDINECVEQHVCDHTCINT
PGSFKCSCWHGFVQSPNDPALCEDRDECEIENGGCSHTCMNVIGTYLCRCPEKYELTNDW
KTCIWDGCKHNNGKCSHYCHPVLGPASVPGAIYCSCPRGYDLWHDGRTCKDIDECMEQHV
CDHTCINNPGSYECRCRQGFRLVNGSTCVDIDECIEKAPCSKICINIPGSYYCTCPIGFK
LQEDECVGK
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcttggcggtttgtttgatgctcctctcgacggtgccggcaatcctcggcaac
tgtcccctgcaggcacttccatggggagcactgagagaggagagggtccttgaaaatggc
actttgcagctgagatacttctgcgaaccgggacgtagactcaaaggtcacaaggtggcg
acttgcaccgccaacggttgggaccatcccgtcccgaaatgcgtgttagactccgacaag
agcaatctgcaaactacggaaaaacattttaacgtgctggcaaacaagaagaagaaccaa
aagcgccttttcgtcaaagcagagctaaacaagaccatagtgtcccaactggatactacc
tgtctcatagagggatccatacagaaattcattaaggctccttcgatcgaacacgcgcac
gaagcgagatacgctaaacggacaaatgtacgcttgccttataatcagtttcatgttgca
atttactcgtgcatggaaggtttcgttttcctgaatctaaagaatgataggctgttctgt
agcaacggtacctggattggacgtcatccgaaatgtgtgagaaaaactgagaaagtgaaa
cattgcgctaaacatggaaaagaatgccagcacgtgtgcgaggatacaccaactgatata
aaatgttcttgcttcgatggattccgagctgaaggatcctcttgtatagacattgatgaa
tgcgccgagggcacagcaaaatgcactgatatctgccgcaatgaacctggtacttaccat
tgcgagtgtcatcatggtttcgtactgggaaatgatcgccactcttgccaagatgtgaac
gagtgcctctcgaacaacagacacgggccttgccaaggtatttgtcgtaatcttaaaggc
agctacgagtgcagttgcgccgatattcccggttacaaattagctgccgacaatcacact
tgcgaagacatcgacgagtgtatgttaggcaatgtcaattgttctcatcagtgttacaac
gttcctggaagcgctttctgtctttgtccgtccggttactacctagaagatgactggaaa
acctgtttagatattaacgaatgtcaaatatcaaacccttgcccgaacgatactgtatgc
aggaacatagtaggatcatacaaatgtgtatccaaagtacgcatggaaaaagtacttcgt
ttcgaaggtacgaatgttgacgaagatcgagatgattatgaagaaatatttaccgaagaa
cccaatctgttacggaaaaacccatggtccacacaccatgtatgtaggaaaggttttaaa
ctgaagagtgtgaacggaacgtcgaagtgcgttgatataaacgagtgcaagctttggaag
cgtcgctgccagcataagtgcgtgaacgaaccgggtacctaccattgtacttgtcacagt
ggttacgagctcaaagaggatggtcgtcactgcagagatatagacgaatgcaccccaggc
acacatacatgttttcacagttgcacgaacttggtaggatcctacgaatgtggatgtcct
cctgatacgcctttagataaagattgtgtgccatctaatgcgtgcgaaatcgcgaactgc
agtcatatatgtgatctaggtcgtgcttcgtaccggtgcgactgtccaagcggatacgta
atgcaggacgataagaagacttgcaaggacattgacgagtgtctcgaaaacaatgaatgc
tataagtgtattaatactcccgggagctatagatgcatctgtccaccgggtgcgaggctc
gccgaggatggcttcaattgcgtatacaagctttgggattttgctaaaagtaactgtagt
ctgggattgaaatatatgagcaacggtcattgcgaagacgttgatgagtgtcttgagagc
gaacatgggtgctcgcagttgtgtatcaataaatacgggtcctaccgttgcgactgtgaa
atcggatggatcttgaagaatgatggtttcacctgtataaaattcaaccattgtttcaac
tccacgtgctcacattcgtgcatctcgacaagtttaagttacaaatgtgagtgtccttta
ggttacattttgaatgaggatggtaacacctgcaaggatgtggacgagtgcgaaaacata
gcgatgaatgattgtagccacgactgcataaacctcaaaggatcttattcatgttcttgt
ccgccaggattcaagttaggagaagataatcgcacgtgtatcgttattatcccatacaca
tgtgccaattctgagggcgatgattgcacttgtcctgagggacatacttatttgcaagaa
gaacacatttgtaaggacatcgacgagtgccaggacgaaagcaggcacaattgttcccac
ttttgcattaataccagcggctcgtattattgtgagtgtccttctgacttgcacatgcta
gcggatttcaagacctgtcggcaatgggacagtttttgcgttaacgaggtgggttgttca
tactcatgcaaacaggacaacgacgaggttcgttgcgtttgtccgacgggatatgaattg
ataaagtataaaaagacttgcaaggatgtaaacgaatgtgatacgggtctgcacgactgt
tcacatgactgtagaaatcatgatggaggttttacttgccattgtccgaattattttatc
cttgataaggataacaaaacttgcctcaatatggagcactgcatcaggtcagaatttgat
tgcgttcgtgactgcataactttcttcgatggctatacacactattgccaatgtccctat
ggttatgaaccatcatcctttgacaacaccacctgctataagattaattattgcgatcgg
gatcatgactgcgaccataaatgcatcagcgaatttgatgattttcgctgccaatgtttc
tcgggatatgagctgtggacacgggacaacaagacctgtataaacatacttgagtgcgag
ttaaacaatccttgttctccccaccgttgtataaatctcgatggtcaattcatgtgcgta
tgctctgtgggacatccgctcacagaggacgaagaaacttgcgagggctacgaagatgat
tgtattcaagaggatggtggatgttcttatctgtgcgcgtatacggacatggactttatg
tgtttgtgtcccaattatgaatttgcggacgatgacagtacatgcaagatagatccatgt
tacatcgacaacggcggatgctcgcatttttgtcattacgacggaaacgtgacctgtacc
tgcccagttgacatgattttgattgaggatgacaggctttgtgtgcataagaaaagttgt
ttggttaataatggcggctgctcagatatctgtacgttcgtgaacgacacgagtatttgc
gactgttccgtcggttatcgcctatcactgcaagacaataccacctgctgggacatcaat
gagtgttcagaattgcgagatatctgtaatcaaatatgcatcaacactcccggcagtttc
aagtgcagctgcagggatggctatgcgcagatgccatatgccccagaaatctgcattgac
gtgaacgagtgtgaagtcatcgagaatgggggctgctcgcacatatgcgtgaacacaccg
ggtagttaccattgcgactgtcccgtcggttatcgcctatcgccgcaagacaaaatcacc
tgcaaggacatcaacgaatgcgtggagcaacacgtctgcgaccacacttgcatcaacact
cccggcagtttcaagtgcagctgctggcatggctttgtgcagagcccaaacgacccggcg
ctctgcgaagaccgggacgagtgcgagatcgagaatgggggctgctcacacacttgtatg
aacgtgataggtacctatctgtgccgatgtccagagaaatacgagctaacaaacgactgg
aagacatgcatttgggatggttgcaagcacaataacggtaaatgctcccattattgtcac
ccggtactggggcccgcgagcgtcccaggagccatttactgctcttgtccacgcggctat
gacttgtggcacgatggccggacctgcaaggacatcgacgaatgcatggagcaacacgtc
tgcgaccacacttgcatcaacaatcccggctcgtacgaatgcagatgcagacagggtttt
cgactggtgaatggttccacctgtgttgacatcgacgaatgcatcgagaaggcgccctgc
agcaagatatgcattaacatacccggttcgtattattgcacgtgcccaatcggatttaag
ctgcaagaggacgaatgcgtaggcaagtaa
DBGET
integrated database retrieval system