Ooceraea biroi (clonal raider ant): 105284276
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Entry
105284276 CDS
T05778
Name
(RefSeq) RING-box protein 1A
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03420
Nucleotide excision repair
obo04120
Ubiquitin mediated proteolysis
obo04141
Protein processing in endoplasmic reticulum
obo04310
Wnt signaling pathway
obo04341
Hedgehog signaling pathway - fly
obo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105284276
04120 Ubiquitin mediated proteolysis
105284276
09124 Replication and repair
03420 Nucleotide excision repair
105284276
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105284276
04341 Hedgehog signaling pathway - fly
105284276
04350 TGF-beta signaling pathway
105284276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105284276
03400 DNA repair and recombination proteins [BR:
obo03400
]
105284276
Enzymes [BR:
obo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
105284276
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
105284276
Multi subunit type E3
SCF complex
Ring finger protein
105284276
Cul2 complex
105284276
Cul3 complex
105284276
Cul4 complex
105284276
Cul7 complex
105284276
Cul8 complex
105284276
Cul9 complex
105284276
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105284276
TCR (transcription coupled repair) factors
Cul4-CSA complex
105284276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
PHD_NSD
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
105284276
NCBI-ProteinID:
XP_011345947
LinkDB
All DBs
Position
12:8350224..8351489
Genome browser
AA seq
113 aa
AA seq
DB search
MATTMDVDDDECDLPTSSSGKGEKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccatggacgtcgacgatgacgagtgtgatttgccgacctccagcagtgga
aaaggcgagaagaagcgtttcgaggtgaagaagtggaacgcggtggcattatgggcctgg
gatatcgtagtggataattgcgctatctgccgtaaccacattatggacctctgcatcgag
tgccaggcaaaccaggcatctgccaccagtgaggaatgcacagtggcctggggagtatgc
aaccacgcctttcactttcactgcatctcacgttggctaaaaacacgacaggtttgccca
ttggacaatcgcgagtgggaatttcagaaatatggtcattaa
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