KEGG   Oryza brachyantha (malo sina): 102700814
Entry
102700814         CDS       T02995                                 
Name
(RefSeq) DNA repair protein RAD16
  KO
K15083  DNA repair protein RAD16
Organism
obr  Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:obr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:obr03400]
    102700814
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      102700814
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_2 zf-RING_6 zf-C3HC4_4 Prok-RING_4
Other DBs
NCBI-GeneID: 102700814
NCBI-ProteinID: XP_040382378
LinkDB
Position
7:11925246..11933060
AA seq 867 aa
MPRRNASSGSTSRGRRRPRNEDEEEEDDEVVGGVPSDDSADSDFLAGTEEEEAADYDDDD
YASDGDGAVPAAAAAAPAVAPPPPPPRYPRRLIRRRARRGRGKKKVAGDDGKPPLPWEVW
EEANEKWLDEWEAMADKREPSEPAVAAMPAAEPAPEVLLPLLRFQKEWLAWALAQEASVS
RGGILADEMGMGKTIQGISLVLTARRLRPPTPPPPHQHASSSSLRLGQSKRWVGCTLVVC
PVVAVIQWAQEIDRHTAKDSVRVLLYHGGRRAAQKRDFNEYDFVITTYSTIEADYRKHIM
PAKVRCEYCDKLFYPDKLKVHLRYYCGPDAQRTENQAKQESKKWDNEKGTWKSSAQKKKN
GSDGEDFVECDGGSGSQSRGQSPLHSVRWERIILDEAHFIKDRRCNTARAVFALESEYKW
ALSGTPLQNRVGELYSLVRFLQIFPYSNYFCKECNCEILDTLLKKQCECGHSSVRHFCWW
NKNISTPIQFGSASDEGRRAMILLKEKVLKGIVLRRTKKGRAADLALPPKIVSLRRDSFD
RNEMEFYEALYTQSRTQFDSYVVAGTLMNNYAHIFDLLTRLRQAVDHPYLVAFSKTADGD
RGKSEGNENMKSQCGICHDLAEDAVVTSCEHVFCKNCLIDYAATLGNVSCPSCSIPLTVD
LTTHNSGDKVTANVKGGKRSGILGRLQNLAAFKTSTKIDALREEIRNMVEHDGSAKGIVF
SQFTSFLDLIEFSLQKSGIKCVQLNGKMNIAEKGKAIDTFTNDPDCRIFLMSLKAGGVAL
NLTVASHVFLMDPWWNPAVENQAQDRIHRIGQFKPIRSTRFVIKDTVEERILQLQEKKRL
VFEGTVGDSPEAMSKLTEADLKFLFQN
NT seq 2604 nt   +upstreamnt  +downstreamnt
atgcctcgccgcaacgcctcctccggctccaccagccgcggccggcgccgcccccgcaac
gaggacgaggaggaggaggacgacgaggtggtggggggtgtcccctccgatgactcggcc
gactccgacttcctggccggcacggaggaggaagaggcggcggactacgacgacgacgac
tacgcgtccgatggggatggcgcggtgccagcggccgcggcagctgctcctgcggtggcc
ccgccgcctccgccgccgcggtacccgcggcggctgatccggcggcgagcgaggaggggt
aggggtaagaagaaggtggccggtgacgacgggaagccccccctgccgtgggaggtgtgg
gaggaggccaacgagaagtggctcgacgagtgggaggctatggcggacaagcgggagccc
tcggagccagccgtggcggcgatgcccgcggcggagccggccccggaggtgctgctcccg
ttgctgcgcttccagaaggagtggctcgcctgggcgctcgcgcaggaggcctccgtctcg
cgcggcggcatcctcgccgacgagatggggatggggaagaccatccagggtatctcgctt
gtcctcaccgcgcgccgcctcaggccccctaccccgcctccgccccaccaacatgcctcc
tcgtcatctctgcggctgggccagtcgaagcggtgggtgggatgcacgctagtcgtctgc
cccgtggtggccgtcatacagtgggcgcaggagattgaccgacacacggccaaagacagc
gtgcgtgtgctgctgtaccatggaggccggcgagcggctcagaagcgtgatttcaacgaa
tacgacttcgtgatcaccacctactccaccatcgaggcagactaccgaaagcacatcatg
ccagccaaggtccggtgcgagtactgtgataaattgttttaccccgacaagctgaaggtg
catttgaggtattactgtggccctgatgctcaaagaaccgagaatcaggccaaacaggag
agcaagaaatgggataacgaaaaggggacatggaagagtagcgcacagaagaagaaaaat
ggtagtgatggtgaagattttgtagaatgtgatggtgggtcggggagccaatcaaggggt
cagtcacctctgcactcagtgcgttgggagcgtattattttggatgaggcacacttcata
aaagacagacgctgcaatactgccagggctgtttttgcattagaatcagaatacaagtgg
gctctgagtggtacacctttgcagaatcgtgttggagaactctactcgctggtccgtttc
ttgcaaatcttcccctactcaaactatttctgcaaggaatgcaactgtgagatactagat
accctattgaagaaacaatgtgaatgcggtcactcatctgtcaggcacttttgctggtgg
aacaagaatatatcaacaccaatacaatttggatcagcaagtgatgagggccgaagagcc
atgattcttctaaaggaaaaggttctgaagggcatagtgttaaggcgcacgaaaaaagga
agagctgcggatcttgccctcccgccaaagatagtgtccttgaggcgggactcttttgat
agaaatgaaatggaattctatgaagctttatatactcagagtcgcacacaatttgattca
tatgttgttgctggtacgctgatgaacaactatgctcatatctttgacctactaacaagg
ttgagacaggctgttgatcatccatatctcgtggcattttctaagacagcagatggtgac
agaggtaaaagtgaaggaaatgagaacatgaaaagccagtgtggtatatgccatgatttg
gcagaagatgctgtggttacctcttgtgaacatgtattctgcaagaattgtttgatagac
tacgctgcaactttggggaatgtttcatgcccatcttgttcaatacccctcaccgtggac
ttaacaacacacaattctggagataaggtcactgcaaatgtgaagggtggcaaacgctca
ggaatattaggcagactacaaaaccttgcagctttcaagacaagcacaaaaatcgatgcc
ttgagagaagaaataagaaacatggttgagcatgatggttccgccaaagggattgtgttc
agccaattcacatcattcttggatttgattgaattctccctacagaagtctggtatcaag
tgtgtgcaacttaatgggaaaatgaacattgctgagaaggggaaggctatagataccttc
accaatgatccagactgcaggatttttctgatgagcttgaaagctggaggagtagctctc
aacctcactgtagcatctcatgttttcttgatggacccttggtggaatcctgcagttgag
aatcaagcgcaggatcgaatccacagaattgggcagttcaagccaatcagaagcacaagg
tttgtgatcaaggacaccgttgaagagcgcatcctgcaattgcaagagaagaagcggctg
gtgtttgaaggcaccgttggcgattcgccggaggctatgtccaagcttacagaggctgat
ctcaagttcttgttccagaattga

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