Oryza brachyantha (malo sina): 102700814
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Entry
102700814 CDS
T02995
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obr03400
]
102700814
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
102700814
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-C3HC4_4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
102700814
NCBI-ProteinID:
XP_040382378
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Position
7:11925246..11933060
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AA seq
867 aa
AA seq
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MPRRNASSGSTSRGRRRPRNEDEEEEDDEVVGGVPSDDSADSDFLAGTEEEEAADYDDDD
YASDGDGAVPAAAAAAPAVAPPPPPPRYPRRLIRRRARRGRGKKKVAGDDGKPPLPWEVW
EEANEKWLDEWEAMADKREPSEPAVAAMPAAEPAPEVLLPLLRFQKEWLAWALAQEASVS
RGGILADEMGMGKTIQGISLVLTARRLRPPTPPPPHQHASSSSLRLGQSKRWVGCTLVVC
PVVAVIQWAQEIDRHTAKDSVRVLLYHGGRRAAQKRDFNEYDFVITTYSTIEADYRKHIM
PAKVRCEYCDKLFYPDKLKVHLRYYCGPDAQRTENQAKQESKKWDNEKGTWKSSAQKKKN
GSDGEDFVECDGGSGSQSRGQSPLHSVRWERIILDEAHFIKDRRCNTARAVFALESEYKW
ALSGTPLQNRVGELYSLVRFLQIFPYSNYFCKECNCEILDTLLKKQCECGHSSVRHFCWW
NKNISTPIQFGSASDEGRRAMILLKEKVLKGIVLRRTKKGRAADLALPPKIVSLRRDSFD
RNEMEFYEALYTQSRTQFDSYVVAGTLMNNYAHIFDLLTRLRQAVDHPYLVAFSKTADGD
RGKSEGNENMKSQCGICHDLAEDAVVTSCEHVFCKNCLIDYAATLGNVSCPSCSIPLTVD
LTTHNSGDKVTANVKGGKRSGILGRLQNLAAFKTSTKIDALREEIRNMVEHDGSAKGIVF
SQFTSFLDLIEFSLQKSGIKCVQLNGKMNIAEKGKAIDTFTNDPDCRIFLMSLKAGGVAL
NLTVASHVFLMDPWWNPAVENQAQDRIHRIGQFKPIRSTRFVIKDTVEERILQLQEKKRL
VFEGTVGDSPEAMSKLTEADLKFLFQN
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccgcaacgcctcctccggctccaccagccgcggccggcgccgcccccgcaac
gaggacgaggaggaggaggacgacgaggtggtggggggtgtcccctccgatgactcggcc
gactccgacttcctggccggcacggaggaggaagaggcggcggactacgacgacgacgac
tacgcgtccgatggggatggcgcggtgccagcggccgcggcagctgctcctgcggtggcc
ccgccgcctccgccgccgcggtacccgcggcggctgatccggcggcgagcgaggaggggt
aggggtaagaagaaggtggccggtgacgacgggaagccccccctgccgtgggaggtgtgg
gaggaggccaacgagaagtggctcgacgagtgggaggctatggcggacaagcgggagccc
tcggagccagccgtggcggcgatgcccgcggcggagccggccccggaggtgctgctcccg
ttgctgcgcttccagaaggagtggctcgcctgggcgctcgcgcaggaggcctccgtctcg
cgcggcggcatcctcgccgacgagatggggatggggaagaccatccagggtatctcgctt
gtcctcaccgcgcgccgcctcaggccccctaccccgcctccgccccaccaacatgcctcc
tcgtcatctctgcggctgggccagtcgaagcggtgggtgggatgcacgctagtcgtctgc
cccgtggtggccgtcatacagtgggcgcaggagattgaccgacacacggccaaagacagc
gtgcgtgtgctgctgtaccatggaggccggcgagcggctcagaagcgtgatttcaacgaa
tacgacttcgtgatcaccacctactccaccatcgaggcagactaccgaaagcacatcatg
ccagccaaggtccggtgcgagtactgtgataaattgttttaccccgacaagctgaaggtg
catttgaggtattactgtggccctgatgctcaaagaaccgagaatcaggccaaacaggag
agcaagaaatgggataacgaaaaggggacatggaagagtagcgcacagaagaagaaaaat
ggtagtgatggtgaagattttgtagaatgtgatggtgggtcggggagccaatcaaggggt
cagtcacctctgcactcagtgcgttgggagcgtattattttggatgaggcacacttcata
aaagacagacgctgcaatactgccagggctgtttttgcattagaatcagaatacaagtgg
gctctgagtggtacacctttgcagaatcgtgttggagaactctactcgctggtccgtttc
ttgcaaatcttcccctactcaaactatttctgcaaggaatgcaactgtgagatactagat
accctattgaagaaacaatgtgaatgcggtcactcatctgtcaggcacttttgctggtgg
aacaagaatatatcaacaccaatacaatttggatcagcaagtgatgagggccgaagagcc
atgattcttctaaaggaaaaggttctgaagggcatagtgttaaggcgcacgaaaaaagga
agagctgcggatcttgccctcccgccaaagatagtgtccttgaggcgggactcttttgat
agaaatgaaatggaattctatgaagctttatatactcagagtcgcacacaatttgattca
tatgttgttgctggtacgctgatgaacaactatgctcatatctttgacctactaacaagg
ttgagacaggctgttgatcatccatatctcgtggcattttctaagacagcagatggtgac
agaggtaaaagtgaaggaaatgagaacatgaaaagccagtgtggtatatgccatgatttg
gcagaagatgctgtggttacctcttgtgaacatgtattctgcaagaattgtttgatagac
tacgctgcaactttggggaatgtttcatgcccatcttgttcaatacccctcaccgtggac
ttaacaacacacaattctggagataaggtcactgcaaatgtgaagggtggcaaacgctca
ggaatattaggcagactacaaaaccttgcagctttcaagacaagcacaaaaatcgatgcc
ttgagagaagaaataagaaacatggttgagcatgatggttccgccaaagggattgtgttc
agccaattcacatcattcttggatttgattgaattctccctacagaagtctggtatcaag
tgtgtgcaacttaatgggaaaatgaacattgctgagaaggggaaggctatagataccttc
accaatgatccagactgcaggatttttctgatgagcttgaaagctggaggagtagctctc
aacctcactgtagcatctcatgttttcttgatggacccttggtggaatcctgcagttgag
aatcaagcgcaggatcgaatccacagaattgggcagttcaagccaatcagaagcacaagg
tttgtgatcaaggacaccgttgaagagcgcatcctgcaattgcaagagaagaagcggctg
gtgtttgaaggcaccgttggcgattcgccggaggctatgtccaagcttacagaggctgat
ctcaagttcttgttccagaattga
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