KEGG   Oryza brachyantha (malo sina): 102705439
Entry
102705439         CDS       T02995                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102705439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:obr03400]
    102705439
Enzymes [BR:obr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     102705439
DNA repair and recombination proteins [BR:obr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     102705439
 Prokaryotic type
     102705439
SSDB
Motif
Pfam: HhH-GPD zf-Vps39_C USP47_C
Other DBs
NCBI-GeneID: 102705439
NCBI-ProteinID: XP_006655955
LinkDB
Position
6:complement(5377945..5381072)
AA seq 303 aa
MGHGHPYPPPPSSSSPAIASQSATGQPRRASGMTRKPGRKLPPPPSPEPYPEHPSPSPAQ
CLAVRDVLLAFHGFPEEFAPFRRLRGSPEDTDDATPSPGAPAVLDGLVTTLLSQNTTDAI
SRRAFTSLKAAFPTWDQVVDEEGKRLEDAIRCGGLAATKAARIRAMLRGVRERRGRICLE
YLRELSVEEVKTELSRFKGIGPKTVACVLMFYLQKDDFPVDTHVLRITKAIGWIPATASR
EKAYLHLNSKIPDDLKFDLNCLFVTHGKLCQSCAKKLGGKKAMGPNSVCPLTSYCCTEEK
MTQ
NT seq 912 nt   +upstreamnt  +downstreamnt
atgggccatggccacccctacccaccgcccccttcctcgtcgtcgccggcaatcgccagc
cagtccgccaccggccagccgcgcagggccagcgggatgacccggaagcccgggcggaag
cttccgcctcccccctcgccggagccgtaccctgaacacccctccccttcccccgcgcaa
tgcctcgccgtccgcgacgtcctcctcgcgttccacggcttccccgaggagttcgcgccg
ttccgccgcctccgcggctccccggaggacacggatgatgcgacgccgtctccgggggcg
cccgccgtcctcgacgggctcgtcacgaccctcctctcgcagaacaccaccgacgccatc
tcgcgtcgcgccttcacgtccctcaaggccgcgttccccacctgggaccaggtggtggat
gaggaggggaagaggctggaggacgccatccggtgcggggggctggcggcgacgaaggcg
gcgaggataagggcgatgctgaggggcgtgagggagaggaggggcaggatctgcctcgag
tacttgcgggagctgtccgtggaagaggtgaagacggagctctcgcggttcaaagggatc
gggccaaagactgtggcctgtgtgctgatgttctatctccagaaggatgattttccagta
gatactcatgtactccgaattacaaaggctattggttggattccagcaacagctagcaga
gagaaggcatatcttcatctgaatagcaaaattcctgatgatctgaaatttgatttgaat
tgtctatttgtaactcatggaaagctttgtcaatcatgtgccaaaaagctaggaggcaag
aaagcaatgggtccgaattctgtgtgccccctaacaagttattgttgcactgaagaaaaa
atgacacaatag

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