Oryza brachyantha (malo sina): 102705559
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Entry
102705559 CDS
T02995
Name
(RefSeq) nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102705559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102705559
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102705559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_7th
Ig_NUP210_1st
Ig_NUP210_5th
Big_2
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_16th
Ig_NUP210_8th
Ig_NUP210_15th
Ig_TMEM132_5th
Motif
Other DBs
NCBI-GeneID:
102705559
NCBI-ProteinID:
XP_015696742
UniProt:
J3N078
LinkDB
All DBs
Position
9:15154843..15177064
Genome browser
AA seq
1957 aa
AA seq
DB search
MASPSAAAAVAAAVLLAAAAAAASPAGGPHMADLSVLLPPRMTKPVEHRLIGGDGCFTWA
WDHHDIISVKPEYNDSSRCSTSARLASIAPYTGRKETSVYATDVISGITIHCKVFVDKIS
RIRIFHHAVKIDLDEVATLRVHAFDDEDNVFSSLVGLQFLWQLTPRLHDTNNHHLVHIPL
KETHLSDCSGFCGDMNIRFELEDRNLGSDLFVVKGIEIGQEVVNSQLFEPQFEHVVDTIT
LTVAEAMSLEPPSPVLVTVGAMVKFKLKIFRQKIPQVVNLPSQHHHWHVTNSSVAQVDSS
LGVLHALSLGFTDIVVEDTRVSGHTQVSSLHVVIPQALFLYLVPVMDNSAHFHEITSIPS
SEVWYVFPGQKYMVLSKAFAEGFDFKEMLITEENDLKLASSTMEFWNLSQVPDSSARSYE
VQTSSLLTPVSQGKGYLDASLTYRTETSGPAKVLKLQQEVNVCSKVKAIWDEEMDNSRII
HLPWVPGPYQEVQLKAVGGCGKMLEDYKLSSSDETVASVSDSLIVRAKKPGRAVIKVVSV
FDALNFDEVTVEVSTPSALSILPNFPVEVPVGTELQAAVTLKTSNGHTFVRCDCLNAFIR
WSLISENEPFEVVGTDVALSIESLKHRSGSWAQYGNPCAWVSLNASSAGQATVVASFSFD
SEMFSGPIFLKATSKISAYYPLVVLQAGNGNRFGGYWVDLSRIQSGIQNTPKELYLVPGS
TMDVFLSGGPEQWDQLVDFVETVDIIGESKKYIDSSTAVQKLSSRLYRISCQSKRNFKLL
FSRGNMIGKDHPVPAVAQSELAIVCDFPFAITLIANENESRLDILEAASRAERRHNRLQA
SPVVISNGRNMRLAAAGVHENGRFFANSSSLCLSWEVTECEGLAYLDEYKDDNMLDDSSW
ERFLVLQNSTGMCTVRATVIGFSSKVDGRTREGEHMFIQSARDALTDAIQLQIVSSLRVT
PHYVLMVFHPEAQETLAVSGGTCFLDASSNDTQVVQILQHPGKALCSQLILGTRGLGTAT
VTIQDVGLSPRALTDSLVRVANVDWIKINSEEHISLMEGSIEDFHISAGTQDGQIFRDSQ
YKYMGIEVHLGDETLELINSDELLDGPKFSVKAAKIGTSSLYVTAKQYSGQRVLSQVVKV
EVYKPLQIHPEYIYLTPGASFVLSVKGGPKVGVVIEYTSLNVKTVKVQNSTGKLSAKNVG
NSTVRAVALSNEGTFICEAFGRVEVDIPVAMILSTQSDRICVGCSMPIYPSLPKGDLFSF
YETCQSYTWIIEDDKVTMFQSAISWQYGLDQGLYSEGKNYPWFSNGSTNAFINHVIGRSA
GKTKVSVSVTCDFLMAGSSVSIVYNASKTILVVPDPPLALGLPITWLFPPFYTTTDLLPI
SVDPDSDDLEITIGYSLLRNSGKSDPVLQNANTIDGSKIRTGESNAIDCIQAKDHSTGRT
EIASCLRVAEVAQAQIATAGSSIHIAYLSVHDKVELDIKYSDELGYTFSEALGIVPVKIE
TNHPDVVSILMPKEGNGTHGNHERFVLQARSHGTALVRLHISHIPKKADFIMVSVGAQMY
PRDVILRSGQQLNFTIIGDRMDVRGSSQWLSSNEKVVHINRITGEAQARGEGIAEVIFKG
PNTKLYTTVTVLKVNQIIVDAPAETLTNAAGPPGGYKFSVKLRSDSTGHSADSFFNHINV
PFDCKVEPSFVGFVEPWSDHAAKKSYCLFHPYSPAQLLPVKLNPKEGFLHVVVHANLKED
PKVIGSAHAPFVKGFYIKEPRKLNLTPSCNHSTITIGGNTDVELFWSAKDLLSASRVDTN
GRGVPSQISYKIDALKRQSFYDKITIILPATGQTEEVEVMYDTGERREPSSSVLTTLAAI
VTCIVVPIATIALFMKLLEKKPIRQGPVRHATPGPGPAPAPPPAGSPAAMADPASPATGE
FSPRTPQPFMEYVRRTIDDTPYYKRDARRRFNPQNTY
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgccgtcggccgccgcggcggtggcggcagcagttctgctggcggcggctgcg
gctgctgcttctccggcgggtggcccccacatggcagacctgagcgtgctcctgcccccg
cggatgaccaagcccgtcgagcaccgcctcatcggcggggacggctgcttcacctgggca
tgggatcaccatgatattatttcagttaaaccagagtataacgacagcagcagatgctca
actagtgctcgtttggcatcaattgcaccttacactggaaggaaggaaacttctgtctat
gccaccgatgttattagtggaatcacaatacattgcaaagtttttgttgacaaaatctcc
cggatcaggattttccatcatgctgttaaaattgacctagatgaagttgccacattgcgt
gttcatgcctttgatgatgaagacaatgtgttttcatcattggtggggttacagttccta
tggcagcttaccccgaggttgcatgataccaataaccatcatctggttcatattccattg
aaagaaacacatttaagtgactgcagtggcttttgtggtgacatgaatatacgatttgag
cttgaagacaggaatcttggttcagatttatttgtggtcaagggtattgagattggccaa
gaggttgttaactctcagttatttgaaccgcaatttgaacatgtagttgatacaatcact
ttaactgttgctgaagctatgtcactagagcctccttcaccagtccttgtcactgtcggt
gctatggtaaagttcaaactcaagatttttcgacaaaaaattccccaagtggttaattta
ccatcacagcatcaccattggcatgtgacaaactcttctgtggcccaagtggatagttcc
ttgggtgtgttacatgctttgagtttgggatttactgacattgttgttgaagacacaagg
gtttctggccacacacaagtatcatccctacatgttgttattccacaagcacttttcctt
tatctagttccggttatggacaattctgctcattttcatgagataacaagtattccatct
tcagaagtttggtatgtctttcctggacaaaaatacatggtcctttctaaagcttttgct
gagggatttgatttcaaggagatgttaattactgaggaaaatgatcttaaattggcgagc
agtaccatggaattctggaacttatcgcaggttccagacagttctgcacggtcctacgaa
gtgcaaacttctagtttgctaactcccgtttcccagggaaaaggatacttagatgcttct
ttaacgtaccgaacagagacatctggaccagcaaaggttctcaagcttcaacaagaagtt
aatgtatgcagtaaagtgaaggccatatgggatgaagaaatggataattccagaattatc
caccttccctgggttcctggaccttatcaggaagttcaactgaaggcagttggaggttgt
ggtaagatgctggaggactacaagctatcttcctctgatgaaactgttgcttccgtgtct
gactcactgatcgtgcgcgcaaaaaagcctggtcgggctgtcatcaaagtagtttctgtt
tttgacgctttgaattttgatgaggtcactgttgaagtatccactccttcagcattgtct
atcttgccaaactttcctgttgaggtgcctgttggaacagagcttcaagctgctgtgacg
ttgaaaacatctaacggacacacgttcgtgcgatgtgattgccttaatgcttttataagg
tggagcctaatatctgagaatgaaccttttgaagttgttggcacagatgtcgctttgagc
atcgaatccttaaagcatcgttctggttcttgggcacaatatggcaacccttgtgcttgg
gtatctctaaatgcatcatctgctggtcaagccacagtagtcgcatcgttttcctttgat
tctgagatgtttagtggacctatttttcttaaggccacttcaaaaatatctgcatattat
cctcttgtggtacttcaagcaggaaatggaaaccgatttggtggctattgggttgactta
tctagaatacaaagtggaattcaaaatacccccaaagagttgtacttagttcctggatca
accatggatgtatttctctctggagggccagaacagtgggaccaactggttgattttgtt
gaaactgttgatattattggtgaatcaaaaaaatatattgatagttctactgctgtgcaa
aaattatcgagtagactataccgtatatcctgccaaagcaaacggaactttaaactgctg
ttttcacgtggaaacatgattggaaaagatcatcctgtccctgctgtagcacaatcagaa
ctggcaattgtttgtgactttccgtttgccataacattgatcgcgaatgaaaatgaaagc
cgacttgatattttggaagctgcaagcagagctgaacgtagacacaatagactgcaggca
tcacctgttgtaatctcaaatggaagaaacatgcgtctagctgctgctggtgtacatgaa
aatggaagattttttgccaattcctcttctctttgcctgagttgggaggtcactgaatgt
gaaggacttgcctacttggacgaatacaaagatgataacatgttagacgactcatcctgg
gagagatttcttgtcctccagaattctactggaatgtgcactgtccgcgctacagtcata
ggcttttcttcaaaagtggatggccgaacccgggaaggagagcacatgtttattcaaagt
gcgcgtgatgctctcaccgatgctattcagttgcagattgtttcttccttacgagtgact
ccgcattatgtcttgatggttttccatccagaagcacaggaaaccttagctgtcagtggt
ggaacatgcttcctggatgcctctagcaatgatacacaggtggtacaaatacttcaacat
ccaggaaaggcactatgttctcagttgattcttggtactagaggcttgggcactgctacg
gttacaatccaggacgttggcctttctcctagagcattaaccgactctttggttagagtt
gcaaatgttgactggattaagataaattcagaagagcacatcagccttatggaaggaagc
atagaagattttcatatctcagctggaacgcaagatggacaaatctttagagattctcag
tacaaatacatgggaattgaagtgcatcttggtgatgagactctggagcttattaattca
gatgagttgctggatggaccaaaattttcagttaaagctgcgaaaattggcacgtcatct
ctatatgtcactgctaagcaatacagtggccagagagttttgagtcaggttgtaaaggtg
gaagtgtacaaaccactgcaaatacatccagagtatatctacctcacaccgggtgcctct
tttgtgctttctgttaaaggtggtccaaaagttggagttgtcatcgagtacacaagtctt
aatgtaaaaactgtaaaagttcaaaattctactggcaagctgtctgcaaagaatgttgga
aactctactgtgcgtgcagttgctttgtcaaatgaaggcaccttcatctgtgaagctttt
ggaagagttgaagtggatatccctgtggctatgatattgagtactcaaagtgaccgtatt
tgtgttggttgcagcatgcccatctacccttctctgcccaagggagatctattttcgttt
tatgaaacttgccaaagttacacttggattatagaagatgacaaggtgacgatgtttcaa
tcagctatatcttggcagtatggacttgatcaagggctatattcagaaggaaaaaactat
ccatggttttccaatggcagtaccaatgcttttatcaatcatgtgattggaagatctgca
ggaaaaaccaaagtttctgtgtctgttacttgtgatttcttgatggctggcagttctgtg
tccatagtttacaatgcatcaaagacaattcttgttgtgccagatcctcctctcgcactt
gggctccctataacatggttattcccacccttttatactactacagaccttttgcctata
tcagttgacccagactcagatgacctggagattactattggctattctctgctaaggaac
agtggtaaaagtgatcctgttttgcaaaatgctaacactattgatggaagtaaaattaga
actggagaaagcaatgcaattgattgcattcaggcaaaggatcactcaactggcagaaca
gaaatagcatcttgtctacgagttgctgaggttgcacaagcacagatagcaactgcagga
tcatcaatccatatagcctatctttctgtacatgataaagttgagttggatataaaatac
agtgatgaattaggttataccttcagcgaagcacttggaatagtccctgtaaagattgaa
acaaatcatcctgatgttgtgtcaattctcatgccaaaagaaggcaatggtacacatggt
aaccatgaacgttttgttctacaggcgagaagtcatggaacagctcttgtaaggttgcac
atcagccatattcccaagaaagcagatttcataatggtatctgttggtgcacagatgtat
cctagggatgtgatacttcgttctggacagcaactgaacttcaccattattggagaccgg
atggatgtgcgtggatccagtcagtggttaagtagcaatgaaaaagttgtgcatattaat
agaataactggtgaagcacaggcacgtggtgaaggtatagcagaagtaatatttaaaggt
ccaaatacaaaactatacacaaccgtcactgtgctgaaggttaaccagataatagttgat
gctcctgcggagacgctaactaatgctgctggaccacctggtggatacaagttctctgta
aaattgagaagtgattcaactgggcacagtgcagactcctttttcaatcatattaatgtc
ccatttgactgcaaggttgaaccttcttttgttgggtttgttgagccatggagtgatcat
gctgctaagaaatcctattgcttatttcatccatattcacctgcacaactgctgcctgtt
aagctgaacccaaaggaaggatttttacatgttgttgttcatgcaaatctaaaagaagat
ccaaaagtgattggatctgctcacgccccctttgtcaaaggattctatattaaagaacct
aggaagttaaatctgactccgagctgcaaccatagcaccattactattggcgggaatact
gatgttgagttattctggagtgctaaagatttgctgtcagccagtcgtgttgatacaaat
ggaagaggtgttcccagtcaaattagttacaagattgatgcacttaaaaggcaatcattc
tatgacaagatcactataattcttccagccaccggccagaccgaggaagtagaagttatg
tacgacactggagaaagaagagagccatcgtcatcagtcttaaccacattggctgcaatt
gtgacatgcattgttgtaccaatcgctacgattgcgctattcatgaagttgctggagaag
aagccgatcaggcagggaccagtaagacacgcaacgcctgggcctgggcctgctccagca
ccgccaccagcaggtagccctgccgcgatggctgatccagcgtcaccagctaccggtgag
ttctcgcctcgtacaccccagcctttcatggagtacgtgaggaggaccatcgacgacacg
ccctactacaagcgcgacgccaggaggcgattcaacccccagaatacgtactga
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