Oryza brachyantha (malo sina): 102717564
Help
Entry
102717564 CDS
T02995
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr00906
Carotenoid biosynthesis
obr01100
Metabolic pathways
obr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
102717564
Enzymes [BR:
obr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
102717564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
DAO
HI0933_like
Pyr_redox_2
FAD_binding_2
GIDA
Thi4
Pyr_redox_3
NAD_binding_8
FAD_binding_3
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-GeneID:
102717564
NCBI-ProteinID:
XP_006644312
LinkDB
All DBs
Position
1:16756161..16760478
Genome browser
AA seq
543 aa
AA seq
DB search
MEFSGATISAPFGCWRAAWGGGQRRPAVGTPAAEGRRRTRAGHGGAAAGLAERRGGGWMV
RCVAATEKKRRGEVEFADEEDYVKGGGGELLYVQMQASKAMDDQSKISSKLLPLPDENSV
LDLVIIGCGPAGLSLAAESAKKGLNVGLIGPDLPFTNNYGVWEDEFKDLGLESCIEHVWK
DTIVYLDGNKPIMIGRAYGRVHRDLLHEELLRRCNDAGVTYLNSKVDKIMESPDGHRVVC
CEGDREVLCRLAIVASGAASGRLLEYEVGGPRVCVQTAYGVEVEVENNPYDPSLMVFMDY
RDCFKEKFSHPEQGNPTFLYAMPMSSTRVFFEETCLASKEAMPFDLLKKRLMSRLDAMGV
HIRKVYEEEWSYIPVGGSLPNTDQKNLAFGAAASMVHPATGYSVVRSLSEAPRYASVISD
ILKNRVYSGQYLPGSSQSSSPSMLAWRTLWPQERKRQRSFFLFGLALIIQLNNEGIQTFF
ETFFRLPKWMWRGFLGSTLSSVDLILFAFYMFAIAPNQMRMNLVRHLLSDSTGSTMIKTY
LTL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggagttctccggcgccaccatctcggcgccgttcggttgctggcgggcggcgtggggc
ggcgggcagcggcggccggcggtggggacgccggccgcggagggcaggaggaggacgcgc
gccggccacggcggcgcggcggcggggctcgcggagcggcgcggcggcgggtggatggtg
aggtgcgtggcggcgacggagaagaagcgccgcggcgaggtggagttcgccgacgaggag
gactacgtcaagggcggcggcggcgagctgctctacgtgcaaatgcaggcgtccaaggcc
atggacgaccagtctaagatctcctccaagctgttgcccttacccgatgaaaattcagtt
cttgatttggtaatcattggctgcggtcctgctggcttatccctagcagcagagtcggct
aagaaagggctcaacgttggtctcattggccctgatcttccattcacgaacaactacggt
gtatgggaggatgaatttaaagacctgggcctggagagctgtattgaacatgtttggaag
gatactatcgtatacctagacggtaacaagccaattatgattggccgtgcatatggcagg
gttcacagggacttactgcatgaggagttgctgagaagatgtaatgacgctggcgtcaca
tacctcaactcgaaggtggacaagatcatggaatctccagatggacatcgggtagtctgt
tgtgaaggggatcgtgaggtactttgcaggcttgccattgttgcgtctggagcagcatct
ggtaggcttctcgagtatgaggttggtggtccacgtgtctgtgtgcagactgcatatggt
gtagaagtcgaggtggagaacaatccatatgaccccagcttaatggttttcatggactac
agagattgcttcaaagagaaattctcacatcccgagcaaggaaatccaaccttcctctat
gccatgcccatgtcatccacacgagttttctttgaggaaacatgcctagcttctaaagaa
gcaatgcccttcgacctccttaagaagcggttgatgtctcggctggatgcgatgggagtt
catattcgaaaagtatacgaggaggaatggtcctacattcctgttggaggatccttacca
aatacagaccagaaaaatctcgcatttggtgcggcagcaagtatggtgcatcctgcaacc
ggatactcggtggttagatcattgtctgaagctccaagatatgcctctgtgatatctgat
atcttgaaaaaccgtgtctactctggacaatatttacctggaagctctcaaagttctagt
ccatcaatgcttgcatggagaacactatggcctcaagaacggaaacgtcaacgatcattc
ttcctttttgggttggctttgataatccaactgaataacgaaggcatccagacattcttt
gaaacctttttccggttacccaaatggatgtggcgaggattccttggttcgacgctttct
tcggtggatctgatactctttgcattctacatgttcgcaattgcgccgaaccaaatgagg
atgaacctcgtcagacatctcctctctgactcgaccggctcaacgatgatcaagacctac
ctgaccttgtaa
DBGET
integrated database retrieval system
