Opitutaceae bacterium TAV5: OPIT5_14930 Help Entry OPIT5_14930       CDS       T03683                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism obt  Opitutaceae bacterium TAV5 Pathway obt03030   DNA replication obt03410   Base excision repair obt03420   Nucleotide excision repair obt03430   Mismatch repair Brite KEGG Orthology (KO) [BR:obt00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     OPIT5_14930    03410 Base excision repair     OPIT5_14930    03420 Nucleotide excision repair     OPIT5_14930    03430 Mismatch repair     OPIT5_14930  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:obt03032]     OPIT5_14930    03400 DNA repair and recombination proteins [BR:obt03400]     OPIT5_14930 Enzymes [BR:obt01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      OPIT5_14930 DNA replication proteins [BR:obt03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      OPIT5_14930 DNA repair and recombination proteins [BR:obt03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      OPIT5_14930    NER (nucleotide excision repair)     GGR (global genome repair) factors      OPIT5_14930    MMR (mismatch excision repair)     DNA ligase      OPIT5_14930   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       OPIT5_14930 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 Nlig-Ia DNA_ligase_ZBD HHH Motif Other DBs NCBI-ProteinID:  AHF91314 UniProt:  W0J3N1 LinkDB All DBs Position 3476136..3478010 Genome browser AA seq 624 aa AA seqDB search MNRLIPAIVLLLGCLAPAAPGAGPASTVRAGGDAASTDTEARARIDFLRTEIARHDDLYY RKAAPEISDEAYDRLKRELAALERRFPDAAAAAGGGAPAGETVGDDRVPEARFAPWRHRA PMPGLEKAYDEATLRRFLGRVAGVAGEHALACTVEPKIDGVAISLVYENGRLVRAATRGN GLIGDDVTANVLAIPGIPPVLRSGDGEAPPARVEVRGEICITPGDFAELNRQRIAAGLAP HASPRNLAAGSIKLRDPAEVARRRLTLVCYGIGAMEPAPVVETQSALLARLGVWGLPVIG HWQLALTPDEILAAVRRLGQARTRGELPWPTDGVVVKVDAFAVRTLLGATGFAPRWAIAC KFGTTRVETRLRAITLQIGRTGVLTPVAELEPVAVGGATIARATLHNADEIARLDLRVGD TVVLERAGDVIPRIVEVVPEARPEKTVPYLFPDTCPFSGDRLERVAGEAAWRCPSSACPG RLRQRIAWYAGKPCMDIPGLGAARIDRLVASGRVASPADLYRLTAADLGSGKSAEKLLLA IAASKRRPLDRLVLALSIPQVGPAAARALVERFDTLDALISASPAALASANGVGDSSAAA IHSWLHDPVNRALMDDLRQLGVGP NT seq 1875 nt NT seq  +upstreamnt  +downstreamnt atgaaccgcctcatacccgccatcgttctcctgctcggatgcctcgctccggccgctccc ggagccggaccggcgtccaccgtccgggccggtggtgacgcggcgtcgaccgacaccgaa gcccgcgcccgtatcgattttcttcggacggagatcgcccgtcacgacgatctttattac cggaaggccgctccggaaatcagcgacgaggcctacgaccgcctcaagcgcgaactggcc gcgctcgaacgccggtttcccgatgcggcggcagcggcaggcggcggggcgccggccggc gaaaccgtgggggacgatcgcgtgccggaggcgaggttcgctccgtggcggcaccgcgcg ccgatgccgggtctggaaaaggcctacgacgaagccacgctgcggcgctttctcgggcgc gtcgccggagtggccggcgagcacgcgcttgcctgcacggtcgagcccaagatcgacggc gtcgcgatcagtctcgtctatgaaaacggccggctcgtccgcgccgccacacgcggcaac ggcctgatcggcgacgacgtcaccgccaacgttctcgccatcccgggcattccgcctgtc ctccgctccggagacggagaggcgccgcccgcccgggtcgaggtgcgcggcgaaatctgc atcacgcccggcgactttgccgaactcaaccggcagcgcatcgccgccggtctcgccccg catgccagtccgcgcaacctcgcggccggctcgatcaagctccgcgatcccgccgaagtg gcccgccggcggctgacgctcgtgtgctatggcatcggtgcgatggagccggcgccggtt gtcgaaacccagtcggcgcttctcgcccggctgggggtctggggattgccggtgatcggc cactggcaactcgcgctcacgccggacgagatcctcgccgccgtgcgacgcctggggcag gctcgcacccgcggagagcttccctggccgaccgacggcgtggtggtcaaggtggacgcg ttcgccgtccggaccctcctcggcgccaccggtttcgctccgcgctgggccattgcctgc aagttcggtacgacccgcgtcgaaacccggctccgtgccatcacgctgcaaatcggccgg accggcgtgctcacgcccgtggcggagctggagccggtcgcggtcggcggcgcgaccatc gcccgggccacgctgcacaatgccgacgaaatcgcccgcctcgacctgcgcgtcggcgac acggttgtcctcgaacgagcgggcgacgtgattccgcgcatcgtcgaggtcgtccccgag gcccgtccggagaaaacggttccgtatctgtttccggatacatgtccgttttccggagac aggctcgaaagagtcgccggcgaggccgcctggcggtgtccgtcgtcggcatgtccgggg cggcttcgccagcggatcgcctggtatgcgggcaaaccctgcatggacatccccggcctc ggcgcggcgcgtatcgacaggctggtggcatcggggcgggtggcatcgcccgccgatctg taccggctgacagccgccgatctcggttccggaaaaagcgcggagaaactcctcctggcg atcgccgccagcaagcggcgtccgctcgatcgcctcgtgctggcgctttcgatcccgcaa gtcggcccggccgccgcccgtgctctggtggaacgcttcgacacgctggatgcgctgata tcggccagcccggctgctcttgccagcgccaacggtgtcggcgattcctcggccgccgcg atccattcatggctccacgatccggtgaatcgcgccctgatggacgacctgcggcagctt ggtgtgggcccctga

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