Afipia carboxidovorans OM5 (Mississippi): OCAR_5004
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Entry
OCAR_5004 CDS
T00783
Name
(GenBank) putative F420-dependent oxidoreductase
KO
K12234
coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:
6.3.2.31
6.3.2.34
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00680
Methane metabolism
oca01100
Metabolic pathways
oca01120
Microbial metabolism in diverse environments
oca01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
OCAR_5004
Enzymes [BR:
oca01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.31 coenzyme F420-0:L-glutamate ligase
OCAR_5004
6.3.2.34 coenzyme F420-1:gamma-L-glutamate ligase
OCAR_5004
SSDB
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Paralog
GFIT
Motif
Pfam:
F420_ligase
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
ACI92139
UniProt:
B6JBS3
LinkDB
All DBs
Position
975352..976119
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AA seq
255 aa
AA seq
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MVKSVTYTALPGLPLVEPGDDLGNIIAEGVRRAEIVVADGDIFVIAQKIVSKAENRYVDL
NEIVPSAQALELAKTVGKDPRHIEVVLSESTEVVRFRQNVMIVAHRLGFVMANAGIDESN
IAHDDGKARVLLLPKDPDASGEMLRQQLQRTFGVKIGVIINDSFGRPWRNGVVGVAIGSA
GIPSLQSMIGAPDLFNRAMRVTEIAIADELAAAASLVMGQAAEGLPVVHIRGFHSEAAHS
PASVLARPKAQDMFR
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagagcgtcacatacactgcgcttcccggattgccgttggttgagcccggagac
gaccttggcaacatcattgccgagggcgtgcgacgtgctgagattgtcgtggccgatggc
gatatcttcgtgatcgcgcagaagatcgtttccaaggccgagaaccgttacgttgacctg
aatgagattgtgccgtctgcacaggcgctggagcttgcgaagacagtcggcaaagatcct
cgtcatatcgaagtcgttctttcggaatcgaccgaggtggtgcgtttccgccagaacgtg
atgatcgtagctcatcggctcggctttgttatggccaatgccggcatcgacgaatccaat
attgcccatgacgatggaaaggcacgcgttctgctgctgccgaaagacccggatgcaagc
ggtgagatgctccggcagcaactgcagcggacgtttggcgtcaagatcggtgttattatc
aatgacagcttcggccgcccatggcgaaatggggtggttggggtcgcgattggaagcgcg
ggcattccgtcattgcaaagcatgatcggcgcgcccgatctgtttaatcgtgccatgcgt
gtcaccgagattgcgatagctgatgaattggccgccgccgcttcattggtgatgggacag
gccgctgaagggctgccagtcgttcacatccgcggttttcacagtgaagccgcgcactct
ccggcttcggtgctggcacggccgaaggcgcaggatatgttccgatga
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