Afipia carboxidovorans OM5 (Mississippi): OCAR_5237
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Entry
OCAR_5237 CDS
T00783
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00300
Lysine biosynthesis
oca00550
Peptidoglycan biosynthesis
oca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OCAR_5237
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
OCAR_5237
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oca01011
]
OCAR_5237
Enzymes [BR:
oca01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
OCAR_5237
Peptidoglycan biosynthesis and degradation proteins [BR:
oca01011
]
Precursor biosynthesis
Amino acid ligase
OCAR_5237
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACI92369
UniProt:
B6JCF3
LinkDB
All DBs
Position
1212113..1213555
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AA seq
480 aa
AA seq
DB search
MKLRDLLRGEAAIDPQAAELAVAGVAVDSRAVKPGDVFFALGGHKTDGARFIEAAVKAGA
VAVVTGHPHTASVPVVVADDPRRALALAAAVVYPRQPRTIAAVTGTSGKTSVAAFTRQVW
DSLGHNAASLGTIGIVSRHRNVYGSLTTPDPVALHRAIDELAGDGVTHLALEASSHGLDQ
HRLDGVRITATAFTNLSRDHMDYHPTVEHYLATKLRLFTDLAPEGAPAVIAADHEHSATV
IAAARTHKLNVMTVGRQGEGIRLVEAAIDGFGQRMTVEHRGQNWRLRLPLVGEFQIENAL
VAAGLVISTGGDAAQAFAALEHLEGAKGRLELVGDRFGAPVFVDYAHKPDALVKALEALR
PYAKGRLVVVFGAGGDRDAGKRPLMGEIAARHADTVIVTDDNPRSEDPAAIRAAILEAAP
GAQNIGDRAEAIRTAVAALAPGDVLLIAGKGHEIGQIVGDKVLPFSDHEAAAAALAEHAT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgcgatcttctcaggggtgaagccgccatcgacccgcaagcggcggagctt
gcggtcgcgggcgtggccgtggacagtcgtgcggtgaagccgggcgatgtgttcttcgcg
ctcggcggtcacaagaccgacggggcgcgctttatcgaagcggcggtgaaggcgggagcc
gtcgcggtcgtgaccggccatcctcacacggcaagcgtgcctgtcgtcgtcgcggacgat
ccgcgccgcgcgctcgcgctggcggcagcggtcgtctatccgcgccagccgcgcaccatc
gccgccgtcaccggcaccagcggcaagacatccgttgcggcgtttacccggcaggtgtgg
gacagtctcggccataatgcggcgagtctggggaccatcggcatcgtctcgcgccatcgc
aatgtctacggctcgctgacgacgcccgacccggtggcgctgcatcgggcgatcgacgaa
ctcgcgggcgatggcgtgacgcatctggcgctggaggcgtcctcgcacgggctcgaccag
catcggctcgacggtgtgcgcatcacggccaccgctttcaccaatctgtcgcgcgaccac
atggattatcatccgaccgtggagcattacctcgcgaccaagctgcggctgttcacggac
cttgcccccgagggtgcgccggcggtgatcgcagccgaccacgaacactccgccacggtg
atcgccgctgcacgtacgcataaactgaatgtcatgacggtcgggcggcagggcgagggc
attcgcctcgtcgaagctgcgatcgacggtttcgggcagcgcatgacggtggagcatcgc
gggcagaactggcgcctgcgtctgccgctggtcggcgaattccagatcgagaatgcgctg
gttgccgctggccttgtcatttccacgggcggcgatgcggctcaggcgttcgcggcgctc
gaacatctcgaaggcgcgaagggacgactcgaactggtgggcgatcgctttggcgcgccg
gtgttcgtcgattacgcccacaagccggatgcgctggtgaaggcgctggaagcgctgcgg
ccctacgcgaaaggccggcttgtcgtggtgttcggtgcgggcggtgaccgcgatgcgggc
aagcggccgttgatgggcgagattgccgcgcggcatgccgatacggtgatcgtcaccgac
gacaatccgcgcagcgaggatcccgccgccattcgcgcggccattcttgaagcagcgccg
ggcgcgcaaaatatcggcgatcgcgccgaggcgatccgcaccgccgttgccgcgcttgcg
cccggcgatgtgctgctgatcgcgggcaagggccacgagatcgggcagatcgtcggcgac
aaggtgttgccgttcagcgatcacgaagcggccgcggccgcgcttgcggagcacgcgaca
tga
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