Afipia carboxidovorans OM5 (Mississippi): OCAR_6322
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Entry
OCAR_6322 CDS
T00783
Name
(GenBank) secretion protein HlyD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca01501
beta-Lactam resistance
oca01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OCAR_6322
01503 Cationic antimicrobial peptide (CAMP) resistance
OCAR_6322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oca03036
]
OCAR_6322
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oca02000
]
OCAR_6322
01504 Antimicrobial resistance genes [BR:
oca01504
]
OCAR_6322
Chromosome and associated proteins [BR:
oca03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OCAR_6322
Transporters [BR:
oca02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OCAR_6322
Antimicrobial resistance genes [BR:
oca01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OCAR_6322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
tRNA-synt_His
Motif
Other DBs
NCBI-ProteinID:
ACI93435
UniProt:
B6JG46
LinkDB
All DBs
Position
complement(2264644..2265828)
Genome browser
AA seq
394 aa
AA seq
DB search
MPSDSETHIPRRKLRLAGLIAGAVIVVVVVTGIVVRENGNARLREWTDAQAVPTVAVALP
NTKPPSAKLTLPGRLEAYYRAPIYARVSGYLKNWHVDIGAKVTAGQLLAEIDAPDLDQQL
LQARADLANAEAASKLSAATLKRRQSLLASNFVSLQEIDERTADLASKNAQVKAMQANVD
RLQALADYKRVEAPFDGVVTERNTDVGALINGGTGTGAAMFVVSDIKKLRVYVNVPQSYL
AAIKIGSVASITVPEHTGRTFPAVVESSSHAVEVGSGTSRMQLTLDNVDGDLRPGSYADV
TLTLTSERDLLSIPASALIFNRDGLSVAVVDADDRIRFRKVTIARDLGREIEIATGLTSR
DRIVVTPADGVVDGDPVRIAGGKSKTGEKTSRAD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgattccgagacccacatcccgcggcggaagctgcgcctcgccgggttgatt
gcgggggccgtgatcgtggtcgtcgtggttaccggaatcgtcgtgcgcgagaacggcaat
gcgcggcttcgggagtggaccgatgcgcaggcggtgccgaccgtcgccgtcgctctgccg
aataccaagccgccgagcgcgaagttgacgctgccggggcggctcgaggcttactatcgc
gcgccgatctatgcgcgtgtcagcggctatctgaagaactggcatgtcgatatcggcgca
aaggtgacggcagggcagttgctggctgagattgatgcgccggacctcgatcagcaattg
ctgcaggcccgtgccgacctcgccaatgcagaagccgcctcgaagctctccgccgcgacg
ttgaagcgccgccagtcactgctcgcctcgaattttgtctcgctgcaggagatcgatgag
cgcaccgcggatcttgcgagcaagaacgcgcaggtgaaggcgatgcaggcgaatgtggat
cgcctgcaggcgctcgcggactacaagcgcgtcgaggcgccgttcgatggcgtcgtcact
gagcgcaacaccgatgtcggtgcgctgatcaacggcggcaccggcacgggtgcggcgatg
ttcgtcgtctcggacatcaagaagctgcgtgtctatgtgaatgtgccgcagagctatctg
gcggctatcaagatcggcagcgtggcgtcgatcacggtgccggagcatactggccgcacg
ttcccggcggtcgtggaatcgtcctcgcacgcagtggaggttggctccggcacgtcgcgg
atgcagctcaccctcgacaatgtggatggagatctgcggccaggctcctatgctgacgtc
acgctcactctgacgagtgagcgcgatctgttgtcgattcccgcaagcgcgctgatcttc
aaccgcgacggcttgagcgttgccgttgtcgatgccgatgatcgtattcgcttcaggaag
gtgacgatcgcccgtgacctcggccgcgagatcgagatcgcgaccggtcttacgtcccgc
gatcgtatcgtagtcacccctgctgatggtgtggtcgatggcgatccggtgcggatcgca
ggcgggaagagcaagaccggcgagaagacctcgcgcgcggactaa
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