Ochrobactrum sp. BTU1: KMS41_00820
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Entry
KMS41_00820 CDS
T09943
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
occ
Ochrobactrum sp. BTU1
Pathway
occ03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KMS41_00820 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
occ03400
]
KMS41_00820 (nth)
Enzymes [BR:
occ01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KMS41_00820 (nth)
DNA repair and recombination proteins [BR:
occ03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KMS41_00820 (nth)
Prokaryotic type
KMS41_00820 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Cas_Csy3
Motif
Other DBs
NCBI-ProteinID:
QWK77823
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All DBs
Position
1:183519..184274
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AA seq
251 aa
AA seq
DB search
MENAKIKSPVNDAATTRVRRPRRVAGTLYTADEIHEIFRRFSILRPEPKGELEHVNAFTL
LVAVVLSAQATDVGVNKATRALFAVADTPQKMLALGEDTVGNYIRTIGLWRNKAKNVILL
SEALIRDYGGEVPDDRDELVKLPGVGRKTANVVLSMAFGHSTMAVDTHILRIGNRIGLAP
AKTPDAIEAILMRVIPKEYLFHAHHWLILHGRYTCKARKPECENCVIADICKYPGKTCDV
PAALIPLPPQF
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgccaaaatcaaatcgcccgtgaatgacgcagcgacaactcgggttcgtcgc
ccgcgtcgggttgcaggcacgctctacacggctgatgaaatccacgagattttccgccgc
ttttccattttgcgccccgaaccaaagggtgagctcgaacatgtgaatgccttcacgctt
ctcgtcgccgtcgtcttgtcggcacaggcaacagacgtgggagtgaacaaggctacccgt
gcgctttttgcggttgccgacacgccgcaaaaaatgctggcgctgggcgaagacacggtt
ggcaattatatccgcaccatcggtctttggcgcaacaaggcgaaaaacgtcattctattg
tccgaagcgcttatccgcgattatggtggtgaagtcccggatgatcgcgacgagttggtg
aagttgccgggcgttggccgaaagaccgccaatgtggtgttgagcatggcttttggccac
tcaaccatggctgtggacacgcatatcctgcgcatcggcaatcggattggtcttgcacca
gccaagacgccggatgcgatagaagctattctgatgcgggttattccgaaagaatatctg
tttcacgcgcatcactggctcatcctgcacgggcgttacacctgtaaggcgcgcaagcct
gaatgcgagaattgcgtgatcgctgatatctgcaaatatcccggaaagacctgtgacgta
cccgcagcgctcattccgttaccgccgcagttttaa
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