Ochrobactrum sp. BTU1: KMS41_05395
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Entry
KMS41_05395 CDS
T09943
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
occ
Ochrobactrum sp. BTU1
Pathway
occ01501
beta-Lactam resistance
occ01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
occ00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KMS41_05395
01503 Cationic antimicrobial peptide (CAMP) resistance
KMS41_05395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
occ03036
]
KMS41_05395
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
occ02000
]
KMS41_05395
01504 Antimicrobial resistance genes [BR:
occ01504
]
KMS41_05395
Chromosome and associated proteins [BR:
occ03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KMS41_05395
Transporters [BR:
occ02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KMS41_05395
Antimicrobial resistance genes [BR:
occ01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KMS41_05395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_RND
Beta-barrel_RND
BSH_CzcB
BSH_LcnD
BSH_CusB
RND-MFP_C
BSH_YknX
CzcB_C
HH_CzcB
BSH_ALG44
Motif
Other DBs
NCBI-ProteinID:
QWK78663
LinkDB
All DBs
Position
1:complement(1117410..1118540)
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AA seq
376 aa
AA seq
DB search
MIKRLILAIIFLVIVVGGLVGFNLFRTQAIKDFFANMQQPAKTVSTVTLEPGVWTPGIEA
IGSANAINGVDLTVQVNGIVDKIEFTANQEVKKGTVLLQLENSIETADLVAAQAEAVLAD
QNLKRAETLRTRGVGAVSDVDTTAAAASAKKAAVAKMQAVLDQKTVTAPFDGVIGISKVD
LGQYLTPGTVIGTLQETDKMRIDFSVPEQSLSSLKLGQPVKVGPNMDALKYNGTIVGIDP
KIDPASRLVSVRAEVQNDEPRLTPGQFVQVRVELPQEDNILALPQTTIVTSLYGDYVYAV
RPEQPKEGEKAPEGQAAKQVAQQVFVKVGRRYGGVAEITDGLKAGDIVITAGQNRLSPGA
AVTIDNTVNPLPAADK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgcctcattctggcaataattttcctcgtgatcgtcgtgggggggctcgtt
ggtttcaacctgttcagaacgcaggcgatcaaggatttcttcgcgaatatgcagcagcct
gccaagacggtttcgactgtcacgcttgagccgggcgtctggactccaggcattgaagcg
attggttctgccaatgcgatcaatggtgtcgatctgacagttcaggtcaatggtatcgtt
gataaaatcgaattcaccgccaatcaggaagtaaagaagggcactgtccttcttcagctg
gaaaacagcattgagactgccgatctggtggctgctcaggctgaagctgtgcttgctgat
cagaacctgaagcgcgctgaaaccttgcgcacgcgtggcgtgggtgcagtttcagacgtt
gacacaactgccgctgctgccagcgccaagaaggccgctgttgccaagatgcaggcagtg
cttgatcagaagaccgtaacggcgccatttgacggtgttatcggtatttccaaggtcgat
ctcggtcagtacctgacgccgggcaccgttatcggcactttgcaggaaaccgacaagatg
cgtatcgacttctctgtaccggagcagtcgctttcttccctgaagcttggacagcctgtg
aaggtcggaccaaacatggacgcattgaaatataacggcacgattgttggtattgatcca
aagatcgaccctgcaagccgtctggtctccgtgcgtgcagaagtgcagaatgatgaacca
cgtctgacgcctggtcagttcgttcaggttcgcgttgagcttccacaggaagacaatatt
ctggctttgccacaaacgacaatcgtgacaagcctttacggtgactatgtttatgctgtt
cgtcccgagcagccaaaagaaggcgaaaaagctcctgaaggacaggctgcaaagcaggtc
gcgcagcaggttttcgtcaaggtcggtcgtcgttatggcggcgttgctgaaatcaccgat
ggcctgaaggctggtgatatcgtgatcactgcaggtcagaaccggctttcgccgggtgct
gctgttacgatcgacaacacagtcaatccgctgcctgcggctgacaagtaa
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