Oceanicola sp. D3: FHY55_06095
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Entry
FHY55_06095 CDS
T06139
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ocd
Oceanicola sp. D3
Pathway
ocd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FHY55_06095 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocd03400
]
FHY55_06095 (nth)
Enzymes [BR:
ocd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FHY55_06095 (nth)
DNA repair and recombination proteins [BR:
ocd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FHY55_06095 (nth)
Prokaryotic type
FHY55_06095 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QDC08837
UniProt:
A0A5B8BP98
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All DBs
Position
1197211..1197858
Genome browser
AA seq
215 aa
AA seq
DB search
MPAPVMTYHQISEVFARFAAQEAEPKGELEHTNAYTLVVAVALSAQATDVGVNKATRALF
EVADTPQKMLDLGLDGLTEHIKTIGLFRQKAKNVMKLSQILVDDYGGEVPSSREALVSLP
GVGRKTANVVLNMWFKHPAQAVDTHIFRVGNRTGIAPGKDVDAVERAIEDRIPAEYQQHA
HHWLILHGRYTCKARKPLCGTCLIRDICLFEEKTL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgcccgtcatgacatatcaccagatctccgaggtcttcgcccgcttcgccgcg
caagaggccgagcccaagggcgagctggagcacaccaacgcctacacgctggttgttgcc
gtggcgctctcggcccaagccaccgacgtgggcgtcaacaaggccacccgcgcgcttttc
gaggtggccgacacgccgcaaaagatgctcgacctcgggctcgacggcctcaccgagcac
atcaaaaccatcggcctcttccgccagaaggcgaagaacgtgatgaaactgagccagatc
ctcgtcgatgactacggcggcgaggtgcccagctcccgcgaggcgcttgtctcgctcccc
ggcgtgggccgcaaaaccgccaacgtggtgctcaacatgtggttcaaacacccggcacag
gcggtcgatacccacatcttccgcgtcggcaaccgcaccggcatcgcccccggcaaggat
gtcgacgccgtcgaacgcgcgatcgaagaccggatccccgccgagtaccagcaacacgcc
caccactggctcatcctgcacggccgctacacctgcaaggcccgcaaaccgctctgcggc
acctgcctcatccgtgacatctgcctttttgaggagaagaccctgtga
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