Oceanimonas sp. GK1: GU3_04005
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Entry
GU3_04005 CDS
T01667
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
oce
Oceanimonas sp. GK1
Pathway
oce00270
Cysteine and methionine metabolism
oce00450
Selenocompound metabolism
oce00670
One carbon pool by folate
oce01100
Metabolic pathways
oce01110
Biosynthesis of secondary metabolites
oce01230
Biosynthesis of amino acids
oce04981
Folate transport and metabolism
Module
oce_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GU3_04005 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GU3_04005 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GU3_04005 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GU3_04005 (metH)
04980 Cobalamin transport and metabolism
GU3_04005 (metH)
Enzymes [BR:
oce01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
GU3_04005 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
MIOS_WD40
Motif
Other DBs
NCBI-ProteinID:
AEY00558
UniProt:
H2FYG5
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All DBs
Position
871156..874821
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AA seq
1221 aa
AA seq
DB search
MFSQLEQALAERILIIDGGMGTMIQSYRLDEAAYRGERFADWGSDLKGNNDLLVLTQPEI
IAQIHSDYFAAGADIVETNTFNATTIAMADYHMESLAAEINLEAAKLARRVADEWTAKEP
HKPRFVAGVLGPTNRTASISPDVNDPGYRNISFDQLVAAYTEATEALIDGGVDLLMIETI
FDTLNAKAAVFAIEGVFEKRGVRLPVMISGTITDASGRTLTGQTTEAFYHSLRHAQPISF
GLNCALGPDELRQYVAELSRISETYVSAHPNAGLPNAFGEYDLDAAEMAAHIREWAESGF
LNLVGGCCGSTPEHIRAIAEAVKGIAPRPLPELPVACRLSGLEPVLITPESMFVNVGERT
NVTGSAKFKRLIKEELYDEALEVALQQVENGAQIIDINMDEGMLDAEACMARFLNLIAGE
PDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEAKFIEQARLVRRYGAAVIVM
AFDEVGQADTRERKFEICQRAYRVLVDKVGFPPEDIIFDPNIFAVATGIDEHNNYAVDFI
EAVKDIKDNLPHAMISGGVSNVSFSFRGNEPVREAIHAVFLYHAIKNGMDMGIVNAGQLA
IYEDIEPELKEKVEAVVLNLNDNATEALLEVAERYRNSGGPANDARDLEWRSWPVNKRLE
HALVKGLTDFIEEDTEEARQQAARPLDVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARV
MKRAVAYLNPYIEATKAVGQSNGKIVMATVKGDVHDIGKNIVGVVLQCNNFEVVDLGVMV
PCETILKTARETNADMIGLSGLITPSLDEMVHVAKEMQRQGFKIPLLIGGATTSKAHTAV
KIEQNYDEPVVYVSNASRAVGVVQSLLSETNKPAFVDRLNKEYEVVRDQHARKKPRTKPV
TLAEARANKVDIDWDAYTPPVPVKPGIHEFRDVPIATLREYIDWTPFFLTWSLAGKYPRI
LEDEVVGEEAKRLFADANAMLDKLAAEGELSCAGVIGLFPANSVGDDVEIYADESRSRVL
HTLRFLRQQTEKKDGFPNYCLADYVAPKGSKPDYIGGFAVTGGIGEDEIVQRYKDAHDDY
NAIMASAVADRLAEAFAEYMHLRVRREFWGYAPDETLSNDELIREKYQGIRPAPGYPACP
EHTEKGTLWQWLDVENRIGMKLTESYAMWPGAAVSGFYFSYPDTRYFAVARIQEDQLLDY
AARKGMTRIDAEKWLAPNLND
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
gtgttttctcagctcgaacaggccctggccgaacgcatattgatcatcgacgggggcatg
ggcaccatgatccagtcataccggctggacgaggccgcctaccggggcgagcgctttgcc
gactggggcagtgatctcaagggcaacaacgatctgctggtgttgacccagcccgagatc
atcgcccaaatccacagcgattatttcgccgccggcgccgacattgtggaaaccaatacc
ttcaacgccaccaccatcgccatggccgactaccacatggaaagcctggcggcggagatc
aacctggaggcggccaaactggcgcgccgggtggccgatgaatggaccgccaaggagccg
cacaagccgcgttttgtggccggggtactgggcccgaccaaccgcaccgcctccatctcg
ccggacgtgaatgatcccggctaccgcaacatcagctttgaccagctggtggcggcctac
accgaggccaccgaagcgctgatcgacggcggtgtcgatctgctgatgatcgagaccatc
ttcgataccctcaacgccaaggcggcggtgtttgccattgaaggggtgtttgagaagcgg
ggcgtgcgtctgccggtgatgatttccggcaccattaccgacgcctccggccgcaccctg
accggccagaccacagaagccttttaccattccctgcgccatgcccagcccatttccttt
ggtctgaactgcgccctggggccggatgagctgcgccagtacgtggccgagctgtcccgc
atcagcgagacctatgtgtcggcccaccctaacgccggcctgcccaacgcctttggtgaa
tacgatctggacgccgccgagatggccgcccacattcgcgagtgggccgaaagcggtttc
cttaacctggtgggcggctgctgcggctccacccccgagcatattcgtgccatcgccgag
gcggtcaagggcattgccccccggccactgcccgagctgccggtggcctgccggctgtcc
ggcctggagccggtgttgatcacccccgagagcatgttcgtcaacgtgggggaacggacc
aacgtgaccggctcggccaaattcaagcggctgatcaaggaagagctctacgacgaggcg
ctggaagtggcgctgcagcaggtagaaaacggcgcccagatcatcgacatcaacatggac
gagggcatgctcgacgccgaggcctgcatggcccgcttcctcaacctgatcgccggcgaa
ccggatatttcccgcgtgcccatcatgatcgactcttcaaagtgggaagtgattgaggcc
ggcctcaagtgcattcagggcaagggcatcgtcaactccatctccctgaaggaaggggaa
gccaagtttatcgagcaggcccggctggtgcgccgttatggtgccgccgttatcgtcatg
gcctttgatgaagtgggccaggccgacacccgggagcgcaagttcgaaatctgccagcgg
gcctaccgggtgctggtggacaaggtcggctttccgccggaagacatcatcttcgatccc
aatatttttgcggtggccaccggcatcgacgaacacaacaactatgcagtcgactttatc
gaggcggtcaaggacatcaaggacaacctgccccacgccatgatctccggcggcgtgtcc
aacgtgtccttctcgttccggggcaacgagccggtgcgggaggccattcatgcggtattc
ctgtaccacgccatcaagaacggcatggacatgggtatcgtcaacgccggccagctggcc
atttacgaggacatcgagcccgagctgaaggagaaggtggaggcggtggtgctcaacctc
aacgataacgccaccgaggccctgctggaagtggccgagcgttatcgcaacagcggtggc
ccggccaacgacgcccgggatctggaatggcgcagctggccggtgaacaagcgcctcgag
cacgccctggtcaagggcttgaccgactttatcgaggaagacaccgaagaggcccgccag
caggcggcgcgcccgctcgacgtgattgaaggcccgctgatggacggcatgaacgtggtc
ggcgatctgttcggcgagggcaagatgttcctgccccaggtggtgaaatcggcccgggtg
atgaagcgggcggtggcctacctcaacccctatatcgaagccaccaaggcggtgggccag
agcaacggcaagattgtgatggccacggtcaagggggacgtgcacgacatcggcaagaac
atcgtcggtgtggtgttgcagtgcaacaactttgaggtggtggacctgggggtcatggtg
ccctgcgaaaccatcctcaagaccgcccgggaaaccaacgccgacatgattggcctgtcg
gggctgatcaccccgtcactggatgaaatggtacacgtggccaaggaaatgcagcgtcag
ggcttcaagatcccgttgctgatcggcggcgccaccacctccaaggcccataccgcggtg
aagattgagcagaactacgacgagccggtggtgtatgtgtccaacgcgtcacgcgccgtg
ggcgtggtgcagagcctgctgagcgagaccaacaagccggcctttgtggatcgccttaac
aaggaatatgaggtagtgcgggatcagcacgcccgcaaaaagccccgcaccaaaccggtg
accctggccgaggcccgggccaacaaggtggacatcgactgggacgcctacaccccgccg
gtgccggtgaaaccgggcattcatgaattccgcgacgtgcccattgccaccctgcgggaa
tacatcgactggacgccgtttttcctcacctggtccctggcaggcaagtacccgcgcatt
ctggaagacgaggtggtgggcgaggaagccaagcggctgttcgccgatgccaacgccatg
ctcgacaagctggccgccgagggcgagctgagctgcgccggggtgattggcctgttcccc
gccaacagcgtgggcgacgacgtggaaatctatgccgacgagagccgctcacgagtgctg
cacaccctgcgctttttgcgccagcagaccgagaagaaggacggctttcccaactactgc
ctggccgactatgtggcgcccaagggcagcaagcccgactacatcggcggctttgcggtc
accggcggcatcggcgaggacgagatcgtccagcgttacaaggatgcccacgacgactac
aacgccatcatggccagcgccgtggcggaccggctggcggaggcctttgccgaatacatg
cacctgcgagtgcggcgggagttctggggctatgctccggacgaaacgctcagcaacgac
gagctgatccgcgaaaagtatcagggcattcgtccggcgccgggctatcccgcctgtccc
gagcacaccgaaaaaggcaccctgtggcagtggctggacgtggaaaaccgcatcggcatg
aagctgaccgaatcctacgccatgtggccgggggcggcggtgtcgggcttctatttctcc
tatccggacacccgctacttcgcggtggcccgtattcaggaagatcagttgctcgattat
gccgcccgtaagggcatgacccggatcgatgccgaaaagtggctggctcccaacctgaat
gactga
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