Oceanimonas sp. GK1: GU3_04345
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Entry
GU3_04345 CDS
T01667
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
oce
Oceanimonas sp. GK1
Pathway
oce00300
Lysine biosynthesis
oce00550
Peptidoglycan biosynthesis
oce01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GU3_04345
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GU3_04345
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oce01011
]
GU3_04345
Enzymes [BR:
oce01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GU3_04345
Peptidoglycan biosynthesis and degradation proteins [BR:
oce01011
]
Precursor biosynthesis
Amino acid ligase
GU3_04345
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Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Cyanate_lyase
Motif
Other DBs
NCBI-ProteinID:
AEY00626
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Position
941529..943013
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AA seq
494 aa
AA seq
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MSLTLRELAIPLGHAAPAIAIEHITLDSRAVTPGCLFIAVKGHQTDGRQFIGSALERGAS
AVIYQADTPEAAGLDAQDHRLLGVYRLPEQLSRLAGAFYGDPSRQLQLVGVTGTNGKSTV
SQLIAHWSQLLGTTTGVMGTLGNGLCGRLRPAVNTTGSALEVQAELAAMLDAGARRVAME
VSSHGLHQHRVAALDFDVAVFTNLSRDHLDYHGTMAEYGEVKRGLFELCRQGRVINADDV
HGRRWLAHYPDAVAYSLHGRMADFPGRQLVAETVHFYGDGVKVTINSDWGNGVLSAPLIG
RFNVANLLAAMGALLVLGESFERLLETAPKLVGVAGRMEPFTAPGKPLVVVDYAHTPDAL
EQVLQALRLHCRGRLWCLVGCGGDRDRGKRPLMAAAGENGADELILTDDNPRTESPAAII
SDMQAGLSAPNTARVIHSRAEAIAYAVGAANEQDIILVAGKGHEDYQIVGTQTLHYSDRE
TVAAALAAALGADR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgtccctcacacttagagagctggcgattcccctgggccacgcggccccggccatcgcc
attgagcacatcaccctcgacagccgggcggtcacccccggctgcctgtttattgccgtt
aaaggccatcagaccgacggtcgtcagtttatcggcagtgccctggagcggggtgcttcg
gcggtgatctatcaggccgacacccccgaagcggccggcctggatgcccaggaccaccgc
ctgctgggcgtgtaccggctgccggagcagctgtcgcggctggccggtgccttttatggc
gacccgtcgcggcaactgcaactggtgggggtgaccggtaccaacggcaaaagcaccgtc
tcccagctgatcgcccactggagccagttgctgggcaccaccaccggcgtgatgggtacc
ctgggcaacggcttgtgcggccggcttcggcctgccgtcaacaccaccggctcggcgctg
gaggtgcaggccgagctggcggccatgctcgacgccggtgcgcgcagagtggcgatggag
gtgtcttcccacggcctgcatcagcaccgagtggccgcgctggattttgacgtagcggtg
ttcaccaacctgagccgggatcatctggattaccacggcaccatggcggaatacggtgag
gtcaagcgcggcctgttcgaactgtgccgccagggccgggtgatcaacgccgatgacgtt
cacggccggcgctggctggctcattaccccgacgccgtggcctacagcctgcacggccga
atggcggattttcccggccgccagctggtggcggaaacggtgcatttttatggtgacggg
gtgaaagtgaccattaactccgactgggggaatggtgtattatccgcccccctgatcggc
cgtttcaatgtcgccaatctgctggcggccatgggggcgttattggtgcttggtgagtcc
ttcgagcgactgctggaaaccgcccccaaactggtgggggtggccgggcgcatggagccc
tttaccgcccccggcaagccgctggtggtggtggactatgcccacaccccggatgccctg
gagcaggtgctacaggcgctgcgtctgcactgccggggccggctgtggtgcctggtgggc
tgcggcggcgatcgggacaggggcaagcggccgctgatggcggcggcgggggaaaatggc
gccgacgagctgatcctgaccgacgacaacccccgcaccgagtcaccggcggccattatc
tccgatatgcaggccggactcagtgcaccgaataccgccagggtgattcactcccgggcc
gaggccattgcctatgccgtgggcgcagcgaacgagcaggacattattttggtagcaggc
aagggccatgaggattatcagatagtgggtacacagaccttacattacagcgatcgggaa
accgtggccgccgcgctggccgccgcgctgggagcagaccggtga
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