Oceanimonas sp. GK1: GU3_04400
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Entry
GU3_04400 CDS
T01667
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
oce
Oceanimonas sp. GK1
Pathway
oce00540
Lipopolysaccharide biosynthesis
oce01100
Metabolic pathways
Module
oce_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GU3_04400 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
oce01005
]
GU3_04400 (lpxC)
Enzymes [BR:
oce01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
GU3_04400 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
oce01005
]
Lipid A
GU3_04400 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AEY00637
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All DBs
Position
954621..955544
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AA seq
307 aa
AA seq
DB search
MIRQRTLKNTVQATGIGLHSGHKVQLRFVPAPANTGIVFRRTDLEPQVEIRADADLVKDT
MLCTALVNDDGVRVSTIEHLSAALAGLGIDNLYIEVDAPEVPVMDGSSHPFIYLLQSGGI
RELNALKRFIRIKQPVRVEDGDKWAEFRPWHRGFKMDLTIDFKHPVFEGQSQHLVLDFSG
AAFVKELSRARTFGFMRDIEYLHSQNLALGGSLENAVVLDDYKVLNEDGLRYPNEFVKHK
MLDAIGDLYMCNHSILGEFRAYKTGHALNNTLLRALLAQTEAWEMVTFGDEGAESPIRYY
DTAFQPA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgattagacaacgaactctcaagaataccgtgcaggccaccggaatcggcctgcattcc
ggccacaaggtgcagctgcgctttgttcctgcgccggccaacacaggtatcgtgtttcgt
cgtaccgatctggagccgcaggtcgagattcgggccgacgccgacctggtgaaggacacc
atgctgtgtaccgccctggtcaatgacgacggcgtgcgggtgtctaccatcgagcacctg
tccgccgccctggcggggctgggcatcgacaacctctatatcgaggtggatgcccccgag
gtgccggtgatggacggcagctcccatcccttcatctacctgctgcagtccggcggcatt
cgcgagctgaacgcgctcaagcgcttcattcgcatcaagcagccggtgcgggtggaagac
ggcgacaagtgggcggaattccggccctggcaccgtggcttcaagatggatctgaccatc
gacttcaagcacccggtgtttgaaggccagagtcagcatctggtgctggatttttccggc
gccgcctttgtgaaggagctaagccgggcgcggacctttggctttatgcgcgatatcgag
tacctgcattcccagaacctggcgctgggcggcagcctggaaaacgccgtggtgctggat
gactacaaggtgctcaacgaagacggtttgcgctatcccaacgagtttgtgaagcacaaa
atgctggacgccatcggcgacctgtatatgtgcaaccacagcattctgggcgagttccgc
gcttacaagaccggccacgccctgaacaacaccctgctgcgggctctgctggcgcagacc
gaggcctgggaaatggtcacctttggtgacgaaggcgccgagtcgcccatccgttactac
gacaccgcctttcagcccgcctga
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