Okeanomitos corallinicola: WJM97_09525
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Entry
WJM97_09525 CDS
T10416
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ocf Okeanomitos corallinicola
Pathway
ocf01501
beta-Lactam resistance
ocf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ocf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
WJM97_09525
01503 Cationic antimicrobial peptide (CAMP) resistance
WJM97_09525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocf02000
]
WJM97_09525
01504 Antimicrobial resistance genes [BR:
ocf01504
]
WJM97_09525
Transporters [BR:
ocf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
WJM97_09525
Antimicrobial resistance genes [BR:
ocf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
WJM97_09525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WZB89909
LinkDB
All DBs
Position
2197626..2200841
Genome browser
AA seq
1071 aa
AA seq
DB search
MQTKNNGFSISNISIRQHIGTLMLTLAVIVIGVFFIIRLPVDLLPSITYPRIGLRIEAPG
ISPEVAVDEITKQLEESFSATEGVIQVFSQTREGRISLDLYFQPGGDIDQALNDATATLN
RARNRLPDTIEEPRLFKFDPSQLPVYEFAITSPSLKDVDLRVFAEEELARELNVVPGVAV
VDVSGGVQEEVRVNIDLDRLQSLGVGLTDVLNELQARNQDISGGRLLGANSEPLTRTVGR
FKNAQEINDISFEVSTPNSNIKNRVYLRDFAQVIDGSEQQRVYVLLNGEQAVKVSIQKQP
DANTVSVVDAVKKRLQELQQAGVIPAASILTPTLDESIFIRNSLANVTTSGLIGSGLAAI
AVLLFLGSIRQTLIIVLAIPLASLTAIILMGFFGLSLNIFSLGGLALGVGIVVDNSIVML
ENIAEGINRKKRQNQSSKLSTSIVIEQAAESSQEVESALLASTSTNLVAVLPFLLIGGFI
SLIFNELILTISFSVAASILIAVTVVPTLTSRLLALPISSSLNDTWFFRAFNRRFDAATK
LYSNFLSGILSWRLLTIVIAIAFFGGGSWWISPQLTQEILPQINTGQVSLFAQFPPGTPL
ETNQKVMQVVDKILLQQPETEYAFSTIGGFLFGSNSTANSLRSSSTITLKPNTDIDAFVE
RVTQEFNQLNLVDIRLRLSPGRVRGLILSNSPIRGADVDIMLQGNDTNTLEQAGQDLLAT
LDEKVTSLRFRPDADPRQPEIQILPDWERVANLGLNTKEIGDTIQTAITGSVPTQIQRNN
RLVDVRVELNDASVQTVSQLERLPLFVEGNQQVRLSDVAKIAEGKAPGEIQRINQRQVYL
IAGSLAEGASLSQAFAEVNQVLEDVDFPEGVSLLPSTTAASNQQIQKSLQTLGGLAIFLV
FVVMAVQYNSLVDPLVIIFTIPLALAGGIFGLYITETAVGATVIVGAVLLVGIVVNNAII
MVELANQIREKEKVDRRTAILKAAPQRLRPILMTTITTVLGMFPLALGIGEGSELLQPLG
VVVFSGLSLATLLTLFIIPCFYTLLHDVVGGNWAKPVVIRLRIWKKNFTKA
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaaaaacaacggatttagtattagcaacatttcaattcgtcagcatattggt
actttaatgctgaccttggctgtaattgtcattggtgtatttttcattattcgtttacct
gtagatttactaccatcaattacctatccccggattgggttgcgaatagaagcaccagga
atttccccagaagtagcagttgatgaaatcaccaaacaattagaagaatctttttcagcc
acagaaggagtaattcaagttttttcccaaacccgtgaaggcagaattagtttagatttg
tactttcaaccaggaggagatattgatcaagccttaaatgatgctacagcaaccttaaac
cgagccagaaacagattaccagatactatcgaagaaccacggttattcaaatttgatcct
tctcaattaccggtttatgaatttgctatcacttcacctagtttaaaagatgttgattta
cgagtttttgccgaagaagaattagctcgtgaattaaatgttgtcccaggagttgccgtg
gtagatgtatcaggaggagtacaagaagaagttagagtcaatattgatttagatcgtctc
caatccctgggagttggtttaactgatgtcttaaacgaactacaagcgcgcaaccaagat
atatccggtggtagacttttaggtgcaaattctgaaccattaaccaggacagttggacgg
ttcaaaaatgcccaagaaattaatgatatttcctttgaagtttccactcctaattctaat
atcaaaaaccgtgtttatttacgtgactttgctcaagtcattgatggttcagaacaacaa
agagtatatgttttattgaatggtgaacaagccgtaaaagttagtattcaaaaacagcca
gatgctaatactgtcagcgttgtagatgcagttaagaaacgtttgcaggaactacaacaa
gctggagtaattcctgccgcatcaattctgactcctaccttagatgaatcaatatttatt
cgcaattccctagcgaatgttactacttctggtttaattggttctggtttagcagcaata
gcagttttattgtttctcggttctattcgccaaactttaattatcgttctagccattccc
ttagcatcattaacagctattattctcatgggattttttggcttatccctaaatattttt
agcttaggtggtttagctttgggtgtaggaatagtagttgataattccatcgtcatgcta
gaaaatattgccgagggaattaatagaaaaaaacgacaaaatcagtcatcaaaactatca
acatcaatagttattgaacaagcagcagaaagtagtcaggaagttgaatcagcattacta
gcttccacaagtacaaacttggtagcagtattaccatttttgctaattggtggttttatt
tccctaatatttaacgaattaattctcaccattagtttttcagtagcagcatcaatttta
attgccgttaccgttgttcctacgctgacatcacggctattagctttaccaatttccagt
tcattaaatgacacctggttttttcgggcatttaaccgtcgtttcgatgcagccactaaa
ttatacagcaactttttatcaggaatattaagttggcggttattaacaattgtaattgcg
atcgccttttttggtggtggtagttggtggatatcccctcaactgacccaagaaattttg
ccccaaataaatactggacaagttagtttatttgcacaattccctccaggaacaccctta
gaaacaaaccaaaaagttatgcaggttgtagataaaatcctgctgcaacaaccagaaaca
gaatatgccttttctaccattggtggctttttatttggtagtaatagtacagccaattcc
ttgcggagttctagcaccattaccctgaaaccaaacacagacatagatgcttttgttgag
cgtgtcactcaggaatttaatcaactcaacctagtagatattcgtctacgtttaagtcct
ggaagagtcaggggtttaattcttagtaactcacccatccggggtgctgatgtggacatc
atgttacaagggaatgacactaatactttagaacaagcaggacaggatttattagcaact
ttagacgagaaagttacctcactcagatttcgtcctgatgctgatccgcgtcaaccagaa
atacaaattttacctgactgggaaagggtcgcaaatttaggtttaaataccaaagaaatc
ggtgatacgattcaaacagcaattacgggaagtgtacccacccaaatccaaagaaataat
cgtttagtagatgtcagagttgaattaaatgatgcttcagtacaaacagtctcccaacta
gaaagattacctttatttgtagaaggaaatcaacaagttcgtttaagtgatgtggcaaaa
attgctgaaggtaaagcaccaggagaaattcaacgtattaaccagcgacaagtatatcta
attgctggtagtttagctgagggagcaagtttaagtcaggcctttgcagaagttaatcaa
gtcctggaagatgtggactttcctgaaggtgtgagtcttttacctagtaccacagcagca
tcaaatcaacaaatccaaaaatctctccaaacattggggggtttagcgatatttttagta
tttgtagtcatggcagtacaatacaattcattggttgatccgctagtgattatatttact
attcccctagctttagccggcggtatttttggtctttacatcacagaaactgctgttggt
gcaactgtcattgttggcgctgttttattggtaggtattgtagttaataacgctattatt
atggtggaattagctaatcaaattcgggaaaaagaaaaagttgaccgtcgtaccgctatt
ttgaaagcagcacctcagcgtttgcgtcctattctaatgacaacaattactacagtctta
gggatgtttcccctagctttaggtattggagaaggttcagaacttttacaacctttaggt
gttgtggtattttccggtttgtctttagcaacattactaactctctttattatcccctgc
ttttatactctcctccatgatgttgttggtgggaattgggcaaaacctgtagtgattaga
ttacgtatttggaagaaaaatttcacaaaggcataa
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