Afipia carboxidovorans OM5 (Goettingen): OCA5_c13970
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Entry
OCA5_c13970 CDS
T01617
Symbol
shc
Name
(GenBank) squalene--hopene cyclase Shc
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00909
Sesquiterpenoid and triterpenoid biosynthesis
ocg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
OCA5_c13970 (shc)
Enzymes [BR:
ocg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
OCA5_c13970 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
OCA5_c13970 (shc)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Pec_lyase
TED_complement
DUF6774
Motif
Other DBs
NCBI-ProteinID:
AEI06113
UniProt:
B6JG70
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All DBs
Position
1512518..1514482
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AA seq
654 aa
AA seq
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MTSDTASAAALDPRRLATSITRASRALHDVQQPDSHWVFELEADVTIPAEYVMMRHYFAE
PVDAEIEAKIAKYLRRMQNDNGGWSLFYGHEFDMSASVKAYYALKMIGDSPDAPHMKKAR
EAMLARGGASRANVFTRIMLALFGQVSWKAVPMMPVEIMLLPRWFPFHLTKVSYWARTVI
VPLLVLMTLKPRAKNPRGIGVRELFLEDPQTVGPTPKAAHQSQLWFTSFDIIDRVLRITD
PFFPKGMRKRAIAKAEAFVTERLNGVDGLGAIFPAMVNSIMMYDVLGYPPNDPNRALARE
SVERLLVIKDDEAYCQPCVSPVWDTALAAHSMLESGEAADIEAAKAGLDWLLPRQVLDLK
GDWADKRPDVRPGGWAFQYNNAHYPDLDDTAVVVMAMDRVRRLDGTTKYDEAIARATEWI
LGLQSENGGWAAFDADNLEYYLNNIPFADHGALLDPPTEDVTARCLSMLAQLGDTLETSE
PMRRGVEYLRKTQLPDGSWFGRWGINYVYGTWSVLCALNAVGVPHDDPMIAKAADWLESI
QNEDGGWGEDGNSYKLNYKGYERAATTASQTAWATLALMAAGRVDRDATQRGIDNLVQSQ
EADGFWGEPYYTGGGFPRVFYLRYHGYSKFFPLWAMARYRNLRSSNSRFVGAGM
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgataccgcaagcgcagccgcgcttgatccgcgacgcctcgcaacgagcatt
acgcgtgccagccgcgcgcttcatgacgtgcagcagccggacagccactgggtgttcgag
ctcgaggccgacgtcacgattccggccgaatatgtgatgatgcggcattattttgccgag
ccggtcgacgccgagattgaagcgaagatcgcgaaatatctgcgccggatgcagaacgac
aacggcggctggtcgctgttctacggccatgagttcgacatgagcgcgagcgtgaaggct
tactacgcgctgaagatgatcggggattcgcccgatgcgccgcacatgaagaaagcgcgc
gaggcgatgctcgcccgcggtggtgcatcgcgcgccaacgtcttcacccgcatcatgctt
gcgctgttcggtcaggtgagctggaaggccgtgccgatgatgccggtcgagattatgctg
ctgccccgctggtttccgttccacctcaccaaggtctcgtattgggcacgcaccgttatc
gtgccgctgctggtactgatgacgttgaagccgcgtgcgaagaatccgcgtggcatcggc
gtccgggaattgttcttggaagacccgcagacggtcggcccgacaccgaaggcagcacat
cagagccagttgtggttcaccagcttcgatattatcgaccgcgtgctgcgcatcaccgat
ccgttctttcccaagggtatgcgcaagcgcgccatcgccaaggcggaagcctttgtcacc
gagcgtctcaacggcgtcgatgggttgggcgcgatcttcccggcgatggtcaacagcatc
atgatgtacgatgtgctgggctatcctccgaacgatccaaaccgcgcgctcgcgcgtgaa
tcggtcgagcggttgctcgtcatcaaggatgatgaggcctattgccagccgtgcgtctcg
ccggtgtgggatacggcgctcgccgcgcattccatgcttgagagcggggaggctgccgat
atcgaggcggcgaaggcagggctcgactggctgttgccgcggcaggtgctcgaccttaag
ggcgactgggcggacaagcgcccggacgtgcgccccggtggctgggcgttccagtacaac
aatgcccattatcccgatctcgacgacaccgcggtcgtggtgatggcgatggaccgggtt
cggcgcctcgacggcaccacaaagtacgacgaggcgatcgcccgcgccacggaatggatt
ctcggactgcagagcgagaacggcggctgggctgcgttcgacgccgacaacctcgaatat
tatctcaacaacattccgttcgccgatcatggcgcgctgctcgacccgccgaccgaggac
gtcacggcgcgctgcctgtcgatgctggcacagcttggcgatacgctcgagaccagcgaa
ccgatgcgccgcggggtcgaatatctgcgcaagacccagcttcccgacggctcatggttc
ggccgctggggcatcaactacgtctacggcacctggtcggtgctgtgtgccctgaatgcc
gtgggtgtgccgcatgacgaccccatgattgccaaggcggccgactggctcgagtcgatc
cagaacgaggacggcggctggggcgaggatggcaacagctacaagctcaactacaaagga
tacgagcgcgctgcgactaccgcgtcacagacggcctgggcgacgctcgccctgatggcg
gccgggcgggtggatcgcgacgctacccagcgtggtattgataatcttgtgcaatcacag
gaagcggatggcttctggggtgaaccctactacaccgggggcgggttcccgcgtgtgttc
tatttgcgataccacggatattctaagttcttccccttgtgggcgatggcgagatatagg
aatttgcgtagcagcaacagccggttcgtaggggctggaatgtga
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